Factsheet for VIT_08s0007g01650.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	golgi, plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65987	Soybean	cytosol	61.16	77.14
KRH75793	Soybean	plastid	73.14	70.74
Os05t0451900-01	Rice	cytosol	46.28	68.1
VIT_13s0019g03250.t01	Wine grape	cytosol	49.03	66.3
PGSC0003DMT400052382	Potato	plastid	68.12	65.58
Solyc09g011860.2.1	Tomato	plastid	67.31	64.6
PGSC0003DMT400028801	Potato	plastid	66.83	64.43
OQU87869	Sorghum	mitochondrion	48.22	63.54
AT2G37980.1	Thale cress	plastid	65.53	63.48
Solyc10g085050.1.1	Tomato	cytosol	61.65	63.18
AT3G54100.1	Thale cress	cytosol	65.21	63.17
Bra000033.1-P	Field mustard	plastid	63.75	62.84
CDX78207	Canola	plastid	63.11	60.47
Bra007045.1-P	Field mustard	plastid	62.95	60.31
CDX73509	Canola	plastid	62.3	59.78
TraesCS3B01G397600.1	Wheat	plastid	50.97	57.27
TraesCS3D01G358900.2	Wheat	plastid	51.13	57.25
TraesCS3A01G365800.1	Wheat	plastid	51.13	56.83
Bra017145.1-P	Field mustard	plastid	63.92	55.01
CDY18412	Canola	plastid	63.75	54.72
AT5G01100.1	Thale cress	plastid	55.83	54.68
GSMUA_Achr5P28820_001	Banana	plastid	46.6	54.55
Bra028889.1-P	Field mustard	plastid	55.34	54.2
CDX93336	Canola	plastid	63.75	54.2
CDY55908	Canola	plastid	55.34	53.6
HORVU1Hr1G073150.1	Barley	plastid	51.94	53.59
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	50.16	53.36
Bra009626.1-P	Field mustard	plastid	55.66	53.09
TraesCS1B01G288800.1	Wheat	plastid	51.78	52.98
CDY10480	Canola	plastid	56.15	52.98
CDY40321	Canola	plastid	55.83	52.91
TraesCS1A01G279800.1	Wheat	plastid	51.78	52.63
Zm00001d038263_P001	Maize	plastid	48.54	52.36
CDY14499	Canola	plastid	60.68	52.23
CDY07758	Canola	plastid	60.68	52.23
Zm00001d012362_P001	Maize	plastid	45.95	52.11
TraesCS1D01G279000.1	Wheat	plastid	47.9	51.93
KXG22127	Sorghum	plastid	51.29	51.88
Os01t0851100-02	Rice	plastid	35.28	50.93
Zm00001d010112_P001	Maize	cytosol, plastid	47.57	50.87
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	47.09	49.83
VIT_11s0016g01190.t01	Wine grape	cytosol, plastid	48.38	47.16
VIT_04s0044g01200.t01	Wine grape	endoplasmic reticulum, golgi	34.3	42.48
VIT_18s0001g06390.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	36.73	42.35
VIT_17s0000g04810.t01	Wine grape	golgi	32.69	39.3
VIT_14s0083g00940.t01	Wine grape	cytosol, vacuole	32.85	39.04
VIT_00s0229g00100.t01	Wine grape	cytosol, golgi, plastid	29.61	31.99
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	28.8	31.06
VIT_03s0038g03240.t01	Wine grape	mitochondrion	29.13	30.41

Protein Annotations

EntrezGene:100247795	wikigene:100247795	MapMan:35.1	EMBL:AM467228	ProteinID:CAN72579	ProteinID:CAN72579.1
ProteinID:CCB55521	ProteinID:CCB55521.1	UniProt:F6HKX9	EMBL:FN595991	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	EntrezGene:LOC100247795	wikigene:LOC100247795	PFAM:PF10250	PIRSF:PIRSF009360
PANTHER:PTHR31741	PANTHER:PTHR31741:SF4	TMHMM:TMhelix	UniParc:UPI00015C97C8	ArrayExpress:VIT_08s0007g01650	EnsemblPlantsGene:VIT_08s0007g01650
EnsemblPlants:VIT_08s0007g01650.t01	unigene:Vvi.19887	RefSeq:XP_002277149	RefSeq:XP_002277149.2	SEG:seg	:

Description

No Description!

Coordinates

chr8:-:15736226..15740051

Molecular Weight (calculated)

70978.2 Da

IEP (calculated)

9.348

GRAVY (calculated)

-0.451

Length

618 amino acids

Sequence
(BLAST)

001: MSSGGANSCN GSPRLAGPTT TRRRVADMID AERSSNFSDV SEEEDNPNGN NGDHHHHCHH PSIRYWLLRR RIFFFAPETW LLKIENGCSW AATAVQWLRS
101: GRHMGRRIFV GLLLLVFFSV FVKFSLMSSH VEANGKRENG LLIIQTFKED WAMAQKVVAE DEASDAVKPL RVLEKIPIPE IWMKPNSDNY HKCITRPRNR
201: IRTGSKTNGY LLVHANGGLN QMRTGICDMV AVAKIMNATL VLPSLDHESF WTDLSDFKDI FDWKHFIEVL NDDIEIVPSL PQKYAAIKPL QKAPVSWSKA
301: SYYRGEMLPL LKRHKVIRFT HTDSRLANNG LAASIQRLRC RANYEALRYK KEIEELGKIL LDRLKKNNEP YIALHLRYEQ DMLAFTGCSH NLTTEEAEKL
401: RIMRYSVKHW KEKEIDSKER RLQGGCPMSP REAALFLKAM GYPSTTTIYI VAGEIYGRNS MAAFRSEYPN VFTHNTLATE EELEPFKPYQ NRLAALDYIL
501: ALESDVFVYT YDGNMAKAVQ GHRRFEGFRK TINPDRQNFV RLIDQLDGGA ISWEMFSQEV KSLHTNRLGA PYLRQAGESP RLEENFFANP FPGCVCNKSQ
601: EQISSLKLYQ GRRRMVVL

Best Arabidopsis Sequence Match ( AT3G54100.1 )
(BLAST)

001: MSVVGAINPV PIAPTTRRRV GDSLDVISER PSNSSDYCNT INQPIVGSTD LDGGDATGQD SSPSSESSAS STGSHYHHDH YHRFYSHPVI RYLLLRKFWI
101: PFYGGASTVV IGQGFRSGRN VGRRILGLLM LLVVASVFLR VYLMGGVRVV DHARLKEFVV VRTLRDDWSM AQREVAENQA SSQPMRVLEK LPIPEIWQKP
201: ESGNYRQCVT RPKNYTRLQR QTNGYLVVHA NGGLNQMRTG ICDMVAVAKI MNATLVLPLL DHESFWTDPS TFKDIFDWRN FMNVLKHDVD IVEYLPPQYA
301: AMKPLLKAPV SWSKASYYRS EMLPLLKRHK VLKFTLTDSR LANNGLPPSI QRLRCRANYQ ALLYTKEIED LGKILVNRLR NNTEPYIALH LRYEKDMLAF
401: TGCNHNLTTE EAEELRIMRY SVKHWKEKEI DSRERRIQGG CPMSPREAAI FLKAMGYPSS TTVYIVAGEI YGSESMDAFR AEYPNVFSHS TLATEEELEP
501: FSQYQNRLAA LDYIVALESD VFVYTYDGNM AKAVQGHRKF EGFRKSINPD RLNFVRLIDH FDEGIISWEE FSSEVKRLNR DRIGAAYGRL PAALPRLEEN
601: FYANPQPDCI CNKSHPEQLR KQSSLRTDSK SWKKSALR

Arabidopsis Description

OFUT28O-fucosyltransferase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9M393]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.