Factsheet for Bra028889.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	golgi
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55908	Canola	plastid	99.68	98.59
AT5G01100.1	Thale cress	plastid	85.74	85.74
Bra009626.1-P	Field mustard	plastid	82.73	80.56
Os05t0451900-01	Rice	cytosol	41.52	62.38
KRH65987	Soybean	cytosol	48.18	62.04
OQU87869	Sorghum	mitochondrion	42.31	56.93
VIT_08s0007g01650.t01	Wine grape	plastid	54.2	55.34
Bra000033.1-P	Field mustard	plastid	54.68	55.02
Bra007045.1-P	Field mustard	plastid	55.31	54.11
KRH75793	Soybean	plastid	53.88	53.21
PGSC0003DMT400028801	Potato	plastid	52.93	52.11
TraesCS3B01G397600.1	Wheat	plastid	44.85	51.45
TraesCS3D01G358900.2	Wheat	plastid	45.01	51.45
TraesCS3A01G365800.1	Wheat	plastid	45.32	51.44
PGSC0003DMT400052382	Potato	plastid	52.3	51.4
Solyc09g011860.2.1	Tomato	plastid	52.3	51.24
Solyc10g085050.1.1	Tomato	cytosol	48.18	50.41
HORVU1Hr1G073150.1	Barley	plastid	47.54	50.08
TraesCS1B01G288800.1	Wheat	plastid	47.54	49.67
TraesCS1A01G279800.1	Wheat	plastid	47.23	49.01
Zm00001d038263_P001	Maize	plastid	44.37	48.87
Bra017145.1-P	Field mustard	plastid	55.47	48.75
Zm00001d012362_P001	Maize	plastid	42.0	48.62
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	44.69	48.54
GSMUA_Achr5P28820_001	Banana	plastid	40.25	48.11
KXG22127	Sorghum	plastid	46.28	47.79
TraesCS1D01G279000.1	Wheat	plastid	42.79	47.37
Os01t0851100-02	Rice	plastid	31.85	46.96
Zm00001d010112_P001	Maize	cytosol, plastid	42.95	46.89
Bra035396.1-P	Field mustard	nucleus, plastid	44.06	43.51
Bra037783.1-P	Field mustard	mitochondrion	35.02	43.5
Bra021472.1-P	Field mustard	mitochondrion	31.54	42.61
Bra006319.1-P	Field mustard	golgi	33.44	41.54
Bra039166.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, mitochondrion	33.28	40.86
Bra008679.1-P	Field mustard	golgi	32.81	40.67
Bra016714.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	31.7	40.16
Bra001038.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, mitochondrion	32.65	40.08
Bra012697.1-P	Field mustard	endoplasmic reticulum	25.2	31.36
Bra040745.1-P	Field mustard	mitochondrion	25.36	30.25
Bra025826.1-P	Field mustard	extracellular, golgi, plasma membrane	26.62	29.73
Bra038495.1-P	Field mustard	plastid	25.83	29.64
Bra033562.1-P	Field mustard	golgi	25.83	29.58
Bra015771.1-P	Field mustard	golgi	26.47	28.74
Bra017390.1-P	Field mustard	nucleus	30.59	28.34
Bra003745.1-P	Field mustard	nucleus, plastid	4.75	22.06
Bra000032.1-P	Field mustard	extracellular	0.79	6.41

Protein Annotations

Gene3D:3.40.50.11350	MapMan:35.1	EnsemblPlantsGene:Bra028889	EnsemblPlants:Bra028889.1	EnsemblPlants:Bra028889.1-P	InterPro:FucosylTrfase_pln
InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006004
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
UniProt:M4EJC3	PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF4	TMHMM:TMhelix
UniParc:UPI0002543632	SEG:seg	:	:	:	:

Description

AT5G01100 (E=1e-289) | unknown protein

Coordinates

chrA02:+:1574941..1577348

Molecular Weight (calculated)

70995.8 Da

IEP (calculated)

9.346

GRAVY (calculated)

-0.440

Length

631 amino acids

Sequence
(BLAST)

001: MSVRVPVPSS SSQLPAAPTA TTTRRRVTDS QEDHCHVSTG GGGGAVVYLP GDEEEATSSS GDEGGGGGSS SCCQSDSHHN YLVRFLSLRK IRLVWMLMAD
101: NKSQWTAAMS RNVRSATNLG RMILSILGIL VVTFFLVVAL SGGGGGRRRH VEKHEFVVSI HPRSNMEKII KEEESSSSSA RVLKHVTIPE IWNQPDTGNY
201: QKCVARPKNQ KPIKKTNGYL VVHANGGLNQ MRTGICDMVA IAKIMNAALV LPFLDHSSFW SDPSTFKDIF DWRHFIKVLA EDVDIVEYLP QEYASIKPLE
301: KNPVSWSKAS YYRNSMTKLL KKHKVIVFNH TDSRLANNSP PPSIQRLRCR ANYEALRYSP EIENLSKVLS SRLRENNEPY LALHLRYEKD MLAFTGCNHS
401: LTSEESIDLE KMRYSIPHWK EKVINGTEQR LEGNCPMTPR EAAVFLKAMG FPSTTKIYIV AGEIYGQNSM NAFHQEFPNV FFHSTLATEE ELSTIKPYQN
501: RLAALDYNLA LESDVFAYTY DGNMAKAVQG HRRFEGFRKT INPDRLSFVK LIDRFDAGLM SWEDFSSEVK RIHGKRLGAP YLRRPGKAGL SPKLEENFYA
601: NPLPGCLCDT SDKQTGLNRF ERPSLRAQSL R

Best Arabidopsis Sequence Match ( AT5G01100.1 )
(BLAST)

001: MSVGVPVNPS SSSQLPAAPT TTTRRRVADS QEDHSHVNTV GGGNAVVYVP DEEETATSCC GGGGGGGSLS CCPSGSHHNY LVGFLSLRKF RLVWMLMVEN
101: KSKWTAGIAR NMRSTTNLGR FILTLLSILV VTFFLIVALS GGVGRRRKHV EKHEFVVSIH PRPTIEKIIR EDESSNSFQV LVPKTTSIPE IWNQPEVGNY
201: QKCVARPKNQ RPIKQTNGYL LVHANGGLNQ MRTGICDMVA IAKIMNATLV LPFLDHSSFW SDPSSFKDIF DWKHFIKVLA EDVNIVEYLP QEFASIKPLE
301: KNPVSWSKSS YYRNSISKLL KKHKVIVFNH TDSRLANNSP PPSIQRLRCR ANYEALRYSE DIENLSNVLS SRLRENNEPY LALHLRYEKD MLAFTGCNHS
401: LSNEESIDLE KMRFSIPHWK EKVINGTERR LEGNCPMTPR EAAVFLKAMG FPSTTNIYIV AGKIYGQNSM TAFHEEFPNV FFHNTLATEE ELSTIKPYQN
501: RLAALDYNLA LESDIFAYTY DGNMAKAVQG HRRFEGFRKT INPDRQRFVR LIDRLDAGLI SWEDFSSKVK KMHQHRIGAP YLRQPGKAGM SPKLEENFYA
601: NPLPGCVCDT SEEQTGLNRF ERPSLRAQSL R

Arabidopsis Description

FRB1FRB1 [Source:UniProtKB/TrEMBL;Acc:A0A178U817]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.