Factsheet for Bra033562.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
golgi 3
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69289	Canola	cytosol	70.42	97.98
AT4G38390.1	Thale cress	endoplasmic reticulum, nucleus, plasma membrane	82.94	82.94
GSMUA_Achr3P14740_001	Banana	mitochondrion	55.72	58.81
PGSC0003DMT400048017	Potato	golgi	56.26	56.88
Solyc01g112070.2.1	Tomato	nucleus	55.54	56.46
GSMUA_Achr8P13270_001	Banana	endoplasmic reticulum, golgi, plasma membrane	45.37	56.43
VIT_03s0038g03240.t01	Wine grape	mitochondrion	60.44	56.25
KRH74090	Soybean	endoplasmic reticulum, golgi, plasma membrane	56.44	55.73
KRH14026	Soybean	golgi	56.81	55.2
Bra025826.1-P	Field mustard	extracellular, golgi, plasma membrane	56.44	55.04
Os04t0563000-01	Rice	endoplasmic reticulum, golgi	54.27	54.17
EES15207	Sorghum	golgi	55.72	53.02
PGSC0003DMT400043331	Potato	extracellular	52.09	52.95
Bra015771.1-P	Field mustard	golgi	55.72	52.84
KXG26900	Sorghum	golgi	55.35	52.68
TraesCS2D01G401900.1	Wheat	golgi	54.63	52.53
TraesCS2B01G423100.1	Wheat	golgi	54.45	52.45
Os08t0554050-01	Rice	golgi	56.81	52.43
Zm00001d002668_P004	Maize	golgi	55.35	52.41
Zm00001d050483_P002	Maize	golgi	54.63	51.99
TraesCS5B01G348700.1	Wheat	golgi	54.63	51.9
HORVU5Hr1G086560.1	Barley	golgi	54.27	51.64
TraesCS5D01G353700.1	Wheat	golgi	54.27	51.55
TraesCS5A01G347600.2	Wheat	golgi	54.63	51.37
TraesCS7D01G276100.1	Wheat	golgi	55.72	51.17
GSMUA_Achr5P19070_001	Banana	endoplasmic reticulum, golgi, plasma membrane	56.44	51.15
Bra012697.1-P	Field mustard	endoplasmic reticulum	46.82	50.89
HORVU2Hr1G096100.42	Barley	mitochondrion, plastid	52.99	50.34
TraesCS7A01G276200.2	Wheat	golgi	54.99	50.33
TraesCS7B01G174000.1	Wheat	golgi	55.17	50.33
Zm00001d021448_P002	Maize	mitochondrion	53.54	49.66
OQU89872	Sorghum	endoplasmic reticulum, golgi, plasma membrane	53.36	49.41
Solyc10g074490.1.1	Tomato	golgi	57.17	48.84
Bra040745.1-P	Field mustard	mitochondrion	46.82	48.77
TraesCS2A01G405000.3	Wheat	golgi	54.99	48.4
Bra038495.1-P	Field mustard	plastid	47.01	47.09
HORVU7Hr1G058080.1	Barley	plastid	54.99	46.69
Bra037783.1-P	Field mustard	mitochondrion	33.21	36.02
Bra021472.1-P	Field mustard	mitochondrion	30.31	35.76
Bra006319.1-P	Field mustard	golgi	32.67	35.43
Bra008679.1-P	Field mustard	golgi	32.12	34.77
Bra016714.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	30.67	33.94
Bra001038.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, mitochondrion	31.4	33.66
Bra039166.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, mitochondrion	31.4	33.66
Bra000033.1-P	Field mustard	plastid	32.3	28.39
Bra035396.1-P	Field mustard	nucleus, plastid	31.76	27.39
Bra009626.1-P	Field mustard	plastid	30.67	26.08
Bra007045.1-P	Field mustard	plastid	30.49	26.05
Bra028889.1-P	Field mustard	plastid	29.58	25.83
Bra017145.1-P	Field mustard	plastid	32.67	25.07
Bra017390.1-P	Field mustard	nucleus	30.67	24.82
Bra003745.1-P	Field mustard	nucleus, plastid	5.44	22.06
Bra000032.1-P	Field mustard	extracellular	0.36	2.56

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra033562	EnsemblPlants:Bra033562.1	EnsemblPlants:Bra033562.1-P	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	UniProt:M4EXM5
PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31818	PANTHER:PTHR31818:SF0	TMHMM:TMhelix	UniParc:UPI000253F955
SEG:seg	:	:	:	:	:

Description

AT4G38390 (E=6e-243) | unknown protein

Coordinates

chrA06:-:26216351..26218765

Molecular Weight (calculated)

63019.2 Da

IEP (calculated)

9.909

GRAVY (calculated)

-0.464

Length

551 amino acids

Sequence
(BLAST)

001: MASLNMKMKK RDNYGAEPDK KKLAMAGIRH QLLLLLRRRH RLFPLVSAFS GCLLLLLLFS FSFPPVIHHS PLGRKNQVAV ESKLLVPENG GRSDRHLWSS
101: KLSNSYYGCS NASGTFQVLD KTSQTDRYLL IATSGGLNQQ RTGIIDAVVA AYILNATLVI PKLDQNSYWK DISNFEEIFD VDWFISHLSK DVKIIKELPN
201: GEESRLIGLQ SIRVPRKCTP SCYLQRVLPL LKKKHVVQLS KFDYRLANHL DTELQKLRCR VNYHAVRYTE TINKMGQILV DRMRTKAKHF VALHLRFEPD
301: MLAFSGCYYG GGQKERLELG VMRRRWKTLH AANPDKVREH GRCPLTPEEI GLMLRGLGFG REVHLYVASG EVYGGDATLA PLRALFPNLH TKETLTSKKE
401: LAPFARFSSR MAALDFIVCD ESDAFVTNNN GNMARILAGR RRYMGHKVTI RPNAKKLHKI FTNRHNMTWD EFSTKVRKYQ TGFMGEPDEM KAGEGEFHEN
501: PTSCICRKKK ANEELKEDEH DSWPWEYSDI GNVPMATRSG LDHQSEVDHE N

Best Arabidopsis Sequence Match ( AT4G38390.1 )
(BLAST)

001: MASLKLKKRD NGAEPDKKKL VIAGIRHQLL LLLRRRHRLF PLVSAVSGCL LLILFSFSTL SPPPLIHHNN QVAVEPNPTT PFRVPENGGR SDRQLWSSRL
101: SNLYYACSNA TDTFQVTDTR SQTNRYLLIA TSGGLNQQRT GIIDAVVAAY ILNATLVVPK LDQKSYWKDT SNFEDIFDVD WFISHLSKDV KIIKELPKEE
201: QSRISTSLQS MRVPRKCTPS CYLQRVLPIL TKKHVVQLSK FDYRLSNALD TELQKLRCRV NYHAVRYTES INRMGQLLVD RMRKKAKHFV ALHLRFEPDM
301: LAFSGCYYGG GQKERLELGA MRRRWKTLHA ANPEKVRRHG RCPLTPEEIG LMLRGLGFGK EVHLYVASGE VYGGEDTLAP LRALFPNLHT KETLTSKKEL
401: APFANFSSRM AALDFIVCDK SDAFVTNNNG NMARILAGRR RYLGHKVTIR PNAKKLYEIF KNRHNMTWGE FSSKVRRYQT GFMGEPDEMK PGEGEFHENP
501: ASCICRTSEA RVKEKAKHVN EDDSSEYSEI GNVPISSRSD LDHSQFDEVI F

Arabidopsis Description

RHS17RHS17 [Source:UniProtKB/TrEMBL;Acc:A0A178V2M6]
SUBAcon: [endoplasmic reticulum,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.