Factsheet for TraesCS5A01G347600.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
golgi 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G353700.1	Wheat	golgi	96.25	97.24
TraesCS5B01G348700.1	Wheat	golgi	95.22	96.21
HORVU5Hr1G086560.1	Barley	golgi	91.98	93.09
OQU89872	Sorghum	endoplasmic reticulum, golgi, plasma membrane	75.26	74.12
Zm00001d021448_P002	Maize	mitochondrion	74.74	73.74
TraesCS7A01G276200.2	Wheat	golgi	67.41	65.61
GSMUA_Achr3P14740_001	Banana	mitochondrion	55.29	62.07
CDY69289	Canola	cytosol	41.47	61.36
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	57.17	58.46
KRH60950	Soybean	endoplasmic reticulum	57.0	58.29
AT1G20550.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	55.63	57.8
KRH51625	Soybean	golgi, mitochondrion, vacuole	56.66	57.74
AT1G76270.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	54.78	56.12
KRH74090	Soybean	endoplasmic reticulum, golgi, plasma membrane	53.41	56.09
VIT_03s0038g03240.t01	Wine grape	mitochondrion	56.66	56.08
Solyc12g098400.1.1	Tomato	unclear	51.02	55.99
PGSC0003DMT400075381	Potato	golgi	56.66	55.99
Solyc12g094590.1.1	Tomato	unclear	56.48	55.82
KRH14026	Soybean	golgi	53.92	55.73
PGSC0003DMT400011606	Potato	golgi	50.68	55.72
CDY29524	Canola	extracellular, golgi, plasma membrane	53.41	55.5
Bra025826.1-P	Field mustard	extracellular, golgi, plasma membrane	53.41	55.4
CDY31477	Canola	extracellular, golgi, plasma membrane	53.24	55.32
Bra015771.1-P	Field mustard	golgi	54.78	55.25
AT4G38390.1	Thale cress	endoplasmic reticulum, nucleus, plasma membrane	51.88	55.17
CDX73250	Canola	golgi	54.61	55.08
Solyc01g112070.2.1	Tomato	nucleus	50.85	54.98
CDY54803	Canola	golgi	51.54	54.71
PGSC0003DMT400048017	Potato	golgi	50.85	54.68
Bra033562.1-P	Field mustard	golgi	51.37	54.63
CDX87622	Canola	nucleus	52.39	54.63
CDY64279	Canola	golgi	51.37	54.53
PGSC0003DMT400043331	Potato	extracellular	48.46	52.4
TraesCS2A01G405000.3	Wheat	golgi	55.29	51.76
TraesCS2A01G414000.1	Wheat	plastid	44.03	50.99
Solyc10g074490.1.1	Tomato	golgi	52.9	48.06
TraesCS4A01G131200.2	Wheat	mitochondrion, plastid	31.23	36.75
TraesCS3A01G095200.2	Wheat	mitochondrion	30.72	36.51
TraesCS4A01G018000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	29.18	36.31
TraesCS2A01G355500.1	Wheat	mitochondrion	29.35	35.25
TraesCS7A01G177400.1	Wheat	golgi, mitochondrion, vacuole	31.4	34.85
TraesCS5A01G251600.3	Wheat	golgi	29.35	34.75
TraesCS6A01G287900.1	Wheat	mitochondrion	28.67	33.73
TraesCS7A01G213300.1	Wheat	mitochondrion, plastid	28.67	33.67
TraesCS3A01G365800.1	Wheat	plastid	28.33	29.86
TraesCS1A01G279800.1	Wheat	plastid	29.18	28.12
TraesCS5A01G209100.1	Wheat	plastid	29.18	27.01
TraesCS7A01G067800.1	Wheat	nucleus, plastid	4.78	20.59
TraesCS7A01G158300.1	Wheat	nucleus, plastid	4.78	20.59
TraesCS4A01G423800.1	Wheat	nucleus, plastid	4.78	20.59
TraesCS4A01G421900.1	Wheat	nucleus, plastid	4.78	20.59
TraesCS7A01G442900.1	Wheat	nucleus, plastid	4.78	20.59
TraesCS4A01G421500.1	Wheat	nucleus, plastid	4.78	20.59
TraesCS2A01G318900.1	Wheat	nucleus, plastid	4.78	20.59

Protein Annotations

EnsemblPlants:TraesCS5A01G347600.2	EnsemblPlantsGene:TraesCS5A01G347600	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	PANTHER:PTHR31818	PANTHER:PTHR31818:SF2
PFAM:PF10250	PIRSF:PIRSF009360	SEG:seg	SignalP:SignalP-TM	TIGR:cd11299	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:550642058..550646383

Molecular Weight (calculated)

65812.3 Da

IEP (calculated)

8.569

GRAVY (calculated)

-0.529

Length

586 amino acids

Sequence
(BLAST)

001: MGYPRRRAHP RRGALLPAVA ALLLLFLAVS LLSIAISAPP LADRHPGISR RSLRHPPTSR WTARDLWGSE LASNFYGCSH SSGKFLAFLN PADSSVATQP
101: DRYLLIVTSG GLNQQRTGIV DAVVAARILN ATLVVPKLDQ TSFWKDSSNF SEIFDIDWFI SFLAKDVKII KEPPQKGGKA VRPYKMRIPR KCTPQCYLKR
201: VLPALLKKHA IRLTKYDYRL SNKLDTDLQK LRCRVNYHAL RFTDPIKELG KRLIQRMREK SRYFIALHLR FESDMLAFSG CYYGGGEKER RDLGAIRKRW
301: KTLHTSNPEK GRRQGRCPLT PEEVGLLLRA LGYGSNVHIY AASGEIYGGE ETLAPLKALF PNYHTKESLS SKDELTPFLA HSSRMAAIDF IVCDGSDAFV
401: TNNNGNMAKI LAERRRYFGH RRTIRPNAKQ LYHLFTNRGN MSWDKFSSQV RKVQKGFMGD PMEVKPGRGE FHAYPAACIC EKTDENKSSP GSNQEIVNRT
501: GIRKAIGEPA YPVYTDEEAD GSDTEDDPTG TGEEEMITEE DPAAGEEMVT EDDPTATEEV IDTEAEADDD SSVRQEGSEL EEILSD

Best Arabidopsis Sequence Match ( AT1G20550.1 )
(BLAST)

001: MAFQRRRNNY YNRLRRLLPF ICAVSGALLI LFALLSILSP PPDDSDRRIS KHINYGANDE KKNTPVVFTV PRGGGRSDRD IWRSWNAEFF YGCCNASSKF
101: PNAKAITRND RYLAIATSGG LNQQRTGIVD AVVAARILNA TLVIPKLDQK SYWKDASDFS NIFDVDWFMS FLSKDVKIIE KLPQKGGQTW SPRRMRVPRK
201: CNEKCYINRV LPVLQKRHAV QLNKFDYRLS NKLRDDLQKL RCRVNYHALK FTDPILEMGN ELVRRMRKRS KHFIALHLRF EPDMLAFSGC YYGGGEKEKK
301: ELGTIRRRWK TLHVNNPEKQ RRQGRCPLTP EEVGLMLRAL GYGSDVHIYV ASGEVYGGEK SLAPLKALFP HFYSKDTIAT KMELKPFSSY SSRMAALDFL
401: VCDESDVFVT NNNGNMARIL AGRRRYFGHK PTIRPNAKKL YKLFMSKENT TWEEFASRVR TFQKGFMGEP KEVRAGKGEF HENPAACICE DTDAKVKAGK
501: MDSRKFGKKE QKEDEDAELS SSETDYEEDQ TDLQDRGLYN GTRLDYDDAL SVSEEPELEE MLSD

Arabidopsis Description

OFUT6O-fucosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HSU3]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.