Factsheet for Solyc01g112070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 3
golgi 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400048017	Potato	golgi	96.13	95.6
VIT_03s0038g03240.t01	Wine grape	mitochondrion	68.08	62.33
GSMUA_Achr8P13270_001	Banana	endoplasmic reticulum, golgi, plasma membrane	50.55	61.85
CDY69289	Canola	cytosol	45.02	61.62
GSMUA_Achr3P14740_001	Banana	mitochondrion	58.3	60.54
Solyc10g074490.1.1	Tomato	golgi	71.77	60.31
Os04t0563000-01	Rice	endoplasmic reticulum, golgi	59.78	58.7
TraesCS2D01G401900.1	Wheat	golgi	59.78	56.54
TraesCS2B01G423100.1	Wheat	golgi	59.41	56.29
KRH74090	Soybean	endoplasmic reticulum, golgi, plasma membrane	57.93	56.27
AT4G38390.1	Thale cress	endoplasmic reticulum, nucleus, plasma membrane	57.2	56.26
GSMUA_Achr5P19070_001	Banana	endoplasmic reticulum, golgi, plasma membrane	63.1	56.25
Solyc12g098400.1.1	Tomato	unclear	55.35	56.18
KRH14026	Soybean	golgi	58.67	56.08
Bra033562.1-P	Field mustard	golgi	56.46	55.54
CDY54803	Canola	golgi	56.46	55.43
Solyc12g094590.1.1	Tomato	unclear	60.52	55.31
KXG26900	Sorghum	golgi	59.04	55.27
Zm00001d002668_P004	Maize	golgi	59.23	55.15
CDY64279	Canola	golgi	55.9	54.89
HORVU2Hr1G096100.42	Barley	mitochondrion, plastid	58.3	54.48
EES15207	Sorghum	golgi	56.83	53.2
Os08t0554050-01	Rice	golgi	58.3	52.93
Zm00001d050483_P002	Maize	golgi	56.46	52.85
TraesCS5B01G348700.1	Wheat	golgi	55.54	51.9
TraesCS2A01G405000.3	Wheat	golgi	59.78	51.76
OQU89872	Sorghum	endoplasmic reticulum, golgi, plasma membrane	56.46	51.43
TraesCS5D01G353700.1	Wheat	golgi	54.98	51.38
Zm00001d021448_P002	Maize	mitochondrion	56.27	51.35
TraesCS7D01G276100.1	Wheat	golgi	56.64	51.17
TraesCS7A01G276200.2	Wheat	golgi	56.64	51.0
HORVU5Hr1G086560.1	Barley	golgi	54.43	50.95
TraesCS5A01G347600.2	Wheat	golgi	54.98	50.85
TraesCS7B01G174000.1	Wheat	golgi	56.27	50.5
Solyc06g060750.2.1	Tomato	mitochondrion	47.97	48.15
HORVU7Hr1G058080.1	Barley	plastid	56.64	47.3
Solyc08g078540.2.1	Tomato	mitochondrion, plastid	48.16	44.09
Solyc01g010930.2.1	Tomato	cytosol, extracellular	20.85	42.32
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	33.03	35.59
Solyc06g069380.2.1	Tomato	mitochondrion	31.92	35.02
Solyc11g005870.1.1	Tomato	mitochondrion	31.0	34.08
Solyc03g114730.2.1	Tomato	cytosol	31.37	34.07
Solyc12g038670.1.1	Tomato	cytosol	30.63	32.55
Solyc04g074670.2.1	Tomato	mitochondrion	30.63	31.03
Solyc03g096370.2.1	Tomato	golgi, mitochondrion, nucleus	28.04	28.84
Solyc10g085050.1.1	Tomato	cytosol	29.52	26.53
Solyc09g011860.2.1	Tomato	plastid	31.0	26.09
Solyc07g041750.2.1	Tomato	plastid	30.07	25.23
Solyc04g074580.1.1	Tomato	nucleus, plastid	4.98	19.85
Solyc11g010230.1.1	Tomato	nucleus	4.98	19.85
Solyc05g051500.2.1	Tomato	nucleus, plastid	4.98	19.85
Solyc04g081150.2.1	Tomato	nucleus, plastid	4.98	19.85

Protein Annotations

MapMan:35.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	UniProt:K4B468	PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31818
PANTHER:PTHR31818:SF0	EnsemblPlantsGene:Solyc01g112070.2	EnsemblPlants:Solyc01g112070.2.1	TMHMM:TMhelix	UniParc:UPI0002767AC1	SEG:seg

Description

No Description!

Coordinates

chr1:-:98180151..98184173

Molecular Weight (calculated)

61896.6 Da

IEP (calculated)

9.541

GRAVY (calculated)

-0.423

Length

542 amino acids

Sequence
(BLAST)

001: MKKRKHETLF LVILHTLLFR RRKQRIHRFL TLASALFAAI LCLTLFFSPP IHQHHLINPI SFINGTGFHM SLQQDHIFRV PMGGGSLSGD VWISKQSKFY
101: HGCSDSSNSF PTAEVNTHPN RYLMIATSGG LNQQRTGIVD AVVAAHILNA ILVVPKLDQK SYWKDSSNFS EIFDVDWFIS RISKDVKIIR DLPRIGDKII
201: TPYTTRVPRK CNAKCYQTRI LPILKKKHAV QLTKFDYRLS NRLTTDMQKL RCRVNYHALK FTDPITEMSR KLVERIRMKS RHFVALHLRF EPDMLAFSGC
301: YYGGGDKERK ELGKIRKRWK TLHARNPDKE QRNGKCPLTP EEIGLMLRAL GFGNDVHIYV ASGEIYGGEE TLAPLKALFP NFYSKDTIAS KEELAPFSSF
401: SSRMAALDFM VCDESDVFVS NNNGNMARML AGRRRYFDHK PTIRPNAKKL NNLLLHRNNM TWEEFASQIR TSQIGFMGEP MEVKPGRGEF HENPTACICA
501: DSEMDSGAAT ISGMGEASDG QVGEEDQEWS DTEYTENELE TQ

Best Arabidopsis Sequence Match ( AT1G20550.1 )
(BLAST)

001: MAFQRRRNNY YNRLRRLLPF ICAVSGALLI LFALLSILSP PPDDSDRRIS KHINYGANDE KKNTPVVFTV PRGGGRSDRD IWRSWNAEFF YGCCNASSKF
101: PNAKAITRND RYLAIATSGG LNQQRTGIVD AVVAARILNA TLVIPKLDQK SYWKDASDFS NIFDVDWFMS FLSKDVKIIE KLPQKGGQTW SPRRMRVPRK
201: CNEKCYINRV LPVLQKRHAV QLNKFDYRLS NKLRDDLQKL RCRVNYHALK FTDPILEMGN ELVRRMRKRS KHFIALHLRF EPDMLAFSGC YYGGGEKEKK
301: ELGTIRRRWK TLHVNNPEKQ RRQGRCPLTP EEVGLMLRAL GYGSDVHIYV ASGEVYGGEK SLAPLKALFP HFYSKDTIAT KMELKPFSSY SSRMAALDFL
401: VCDESDVFVT NNNGNMARIL AGRRRYFGHK PTIRPNAKKL YKLFMSKENT TWEEFASRVR TFQKGFMGEP KEVRAGKGEF HENPAACICE DTDAKVKAGK
501: MDSRKFGKKE QKEDEDAELS SSETDYEEDQ TDLQDRGLYN GTRLDYDDAL SVSEEPELEE MLSD

Arabidopsis Description

OFUT6O-fucosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HSU3]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.