Factsheet for TraesCS2D01G401900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
mitochondrion 3
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G423100.1	Wheat	golgi	94.76	94.93
TraesCS2A01G405000.3	Wheat	golgi	97.73	89.46
HORVU2Hr1G096100.42	Barley	mitochondrion, plastid	89.18	88.1
Os04t0563000-01	Rice	endoplasmic reticulum, golgi	83.42	86.59
KXG26900	Sorghum	golgi	82.55	81.69
Zm00001d002668_P004	Maize	golgi	82.2	80.93
GSMUA_Achr8P13270_001	Banana	endoplasmic reticulum, golgi, plasma membrane	50.79	65.69
CDY69289	Canola	cytosol	42.23	61.11
GSMUA_Achr5P19070_001	Banana	endoplasmic reticulum, golgi, plasma membrane	64.05	60.36
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	60.03	60.03
Solyc01g112070.2.1	Tomato	nucleus	56.54	59.78
PGSC0003DMT400048017	Potato	golgi	56.72	59.63
VIT_03s0038g03240.t01	Wine grape	mitochondrion	61.26	59.29
AT1G20550.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	57.94	58.87
CDY31477	Canola	extracellular, golgi, plasma membrane	57.42	58.33
CDY29524	Canola	extracellular, golgi, plasma membrane	57.24	58.16
KRH60950	Soybean	endoplasmic reticulum	57.94	57.94
Bra025826.1-P	Field mustard	extracellular, golgi, plasma membrane	57.07	57.88
AT1G76270.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	57.07	57.17
KRH51625	Soybean	golgi, mitochondrion, vacuole	57.24	57.04
Solyc12g098400.1.1	Tomato	unclear	52.88	56.74
TraesCS7D01G276100.1	Wheat	golgi	58.99	56.33
TraesCS5D01G353700.1	Wheat	golgi	56.72	56.03
Bra015771.1-P	Field mustard	golgi	56.72	55.94
PGSC0003DMT400011606	Potato	golgi	52.01	55.91
AT4G38390.1	Thale cress	endoplasmic reticulum, nucleus, plasma membrane	53.75	55.9
CDX87622	Canola	nucleus	54.8	55.87
KRH74090	Soybean	endoplasmic reticulum, golgi, plasma membrane	54.28	55.73
CDX73250	Canola	golgi	56.37	55.59
CDY64279	Canola	golgi	52.88	54.89
CDY54803	Canola	golgi	52.71	54.71
Bra033562.1-P	Field mustard	golgi	52.53	54.63
KRH14026	Soybean	golgi	53.93	54.5
PGSC0003DMT400075381	Potato	golgi	56.37	54.47
Solyc12g094590.1.1	Tomato	unclear	55.85	53.96
PGSC0003DMT400043331	Potato	extracellular	50.44	53.32
TraesCS2D01G410600.1	Wheat	plastid	43.98	49.8
Solyc10g074490.1.1	Tomato	golgi	55.5	49.3
TraesCS3D01G095400.1	Wheat	mitochondrion	31.24	36.53
TraesCS4D01G284800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	29.84	36.31
TraesCS2D01G352800.1	Wheat	mitochondrion	30.54	35.86
TraesCS4D01G175500.2	Wheat	mitochondrion, plastid	30.89	35.54
TraesCS6D01G268600.1	Wheat	mitochondrion	30.19	34.74
TraesCS7D01G215200.1	Wheat	mitochondrion, plastid	29.84	34.27
TraesCS5D01G259500.1	Wheat	golgi	30.02	34.19
TraesCS7D01G178800.1	Wheat	golgi	31.41	34.09
TraesCS3D01G358900.2	Wheat	plastid	28.97	30.07
TraesCS1D01G279000.1	Wheat	plastid	27.92	28.07
TraesCS5D01G215300.3	Wheat	nucleus, plasma membrane, plastid	28.97	26.39
TraesCS2D01G316700.1	Wheat	nucleus, plastid	5.24	22.56
TraesCS7D01G159300.1	Wheat	nucleus, plastid	5.24	22.06
TraesCS7D01G158900.1	Wheat	nucleus, plastid	5.24	22.06
TraesCS7D01G061900.1	Wheat	nucleus, plastid	5.24	22.06
TraesCS7D01G432000.1	Wheat	nucleus, plastid	5.24	22.06
TraesCS7D01G061500.1	Wheat	nucleus, plastid	5.24	22.06

Protein Annotations

EnsemblPlants:TraesCS2D01G401900.1	EnsemblPlantsGene:TraesCS2D01G401900	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	PANTHER:PTHR31818	PANTHER:PTHR31818:SF9
PFAM:PF10250	PIRSF:PIRSF009360	SEG:seg	TIGR:cd11299	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr2D:+:516827909..516831596

Molecular Weight (calculated)

63911.3 Da

IEP (calculated)

9.371

GRAVY (calculated)

-0.445

Length

573 amino acids

Sequence
(BLAST)

001: MGSRRRRGQH HGRWVVPSVA PAAAAFTAAG LLLVVVAFHC FLSPPLGGGG GGVRRHNPPF LLNKPAELRR NLVGTVDFTV PSGGSRLGEE LWTSKTAHHF
101: VGCSDATKEF AADAKAVTEP NRYLMIATSG GLNQQRTGII DAVVAARILN ATLVIPKLDQ ASFWNDASDF GEIFDADSFI SSLANDVKII RQVPDRNGKT
201: PSPYKMRVPR KCTPKCYENR VLPALLKKHV VQLTKFDYRV SNRLETDLQK LRCRVNYHAL KFTDPILEMG RLLVQRMRAK SGRFIALHLR FEPDMLAFSG
301: CYFGGGEIER RELGAIRKRW DTLHESNPDR ERRHGKCPLT PEEVGFMLRA LGFGKDVHLY VASGDVYGGE ETLAPLKALF PNFHSKETLS SKEELAPFLP
401: FSSRMAALDY VVCDDSDVFV TNNNGNMARM LAGRRRYFGH KRTIRPNSKK LSSLFLNRTS MSWDTFASKV QMYQKGFMGE PNEIKPGKGE FHEHPMDCIC
501: ARTKRRTGPS KPYLSNRARE AAGNHTSDAE FDWSDLDYGE NTPLGGDSST ETDPDYGRIA GPDIPELEDI LSD

Best Arabidopsis Sequence Match ( AT1G20550.1 )
(BLAST)

001: MAFQRRRNNY YNRLRRLLPF ICAVSGALLI LFALLSILSP PPDDSDRRIS KHINYGANDE KKNTPVVFTV PRGGGRSDRD IWRSWNAEFF YGCCNASSKF
101: PNAKAITRND RYLAIATSGG LNQQRTGIVD AVVAARILNA TLVIPKLDQK SYWKDASDFS NIFDVDWFMS FLSKDVKIIE KLPQKGGQTW SPRRMRVPRK
201: CNEKCYINRV LPVLQKRHAV QLNKFDYRLS NKLRDDLQKL RCRVNYHALK FTDPILEMGN ELVRRMRKRS KHFIALHLRF EPDMLAFSGC YYGGGEKEKK
301: ELGTIRRRWK TLHVNNPEKQ RRQGRCPLTP EEVGLMLRAL GYGSDVHIYV ASGEVYGGEK SLAPLKALFP HFYSKDTIAT KMELKPFSSY SSRMAALDFL
401: VCDESDVFVT NNNGNMARIL AGRRRYFGHK PTIRPNAKKL YKLFMSKENT TWEEFASRVR TFQKGFMGEP KEVRAGKGEF HENPAACICE DTDAKVKAGK
501: MDSRKFGKKE QKEDEDAELS SSETDYEEDQ TDLQDRGLYN GTRLDYDDAL SVSEEPELEE MLSD

Arabidopsis Description

OFUT6O-fucosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HSU3]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.