Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- vacuole 2
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| unclear:
26455813
|
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075381 | Potato | golgi | 95.78 | 95.78 |
| Solyc12g098400.1.1 | Tomato | unclear | 64.42 | 71.54 |
| AT1G76270.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 65.26 | 67.66 |
| Bra015771.1-P | Field mustard | golgi | 66.27 | 67.64 |
| CDY31477 | Canola | extracellular, golgi, plasma membrane | 64.25 | 67.55 |
| KRH60950 | Soybean | endoplasmic reticulum | 65.09 | 67.36 |
| KRH51625 | Soybean | golgi, mitochondrion, vacuole | 65.09 | 67.13 |
| CDX73250 | Canola | golgi | 65.77 | 67.13 |
| Bra025826.1-P | Field mustard | extracellular, golgi, plasma membrane | 63.91 | 67.08 |
| CDY29524 | Canola | extracellular, golgi, plasma membrane | 63.74 | 67.02 |
| AT1G20550.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 63.74 | 67.02 |
| VIT_18s0001g00100.t01 | Wine grape | endoplasmic reticulum, golgi, mitochondrion | 64.59 | 66.84 |
| CDX87622 | Canola | nucleus | 62.9 | 66.37 |
| GSMUA_Achr8P13270_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 48.57 | 65.01 |
| GSMUA_Achr3P14740_001 | Banana | mitochondrion | 55.82 | 63.41 |
| Solyc01g112070.2.1 | Tomato | nucleus | 55.31 | 60.52 |
| EES15207 | Sorghum | golgi | 59.02 | 60.45 |
| Zm00001d050483_P002 | Maize | golgi | 58.01 | 59.41 |
| Os08t0554050-01 | Rice | golgi | 59.7 | 59.3 |
| Os04t0563000-01 | Rice | endoplasmic reticulum, golgi | 54.97 | 59.06 |
| TraesCS7A01G276200.2 | Wheat | golgi | 59.02 | 58.14 |
| TraesCS7D01G276100.1 | Wheat | golgi | 58.68 | 58.0 |
| TraesCS7B01G174000.1 | Wheat | golgi | 58.68 | 57.62 |
| GSMUA_Achr5P19070_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 59.02 | 57.57 |
| HORVU5Hr1G086560.1 | Barley | golgi | 56.16 | 57.51 |
| TraesCS5B01G348700.1 | Wheat | golgi | 55.99 | 57.24 |
| KXG26900 | Sorghum | golgi | 55.48 | 56.82 |
| Zm00001d002668_P004 | Maize | golgi | 55.65 | 56.7 |
| TraesCS5D01G353700.1 | Wheat | golgi | 55.31 | 56.55 |
| TraesCS5A01G347600.2 | Wheat | golgi | 55.82 | 56.48 |
| TraesCS2D01G401900.1 | Wheat | golgi | 53.96 | 55.85 |
| TraesCS2B01G423100.1 | Wheat | golgi | 53.29 | 55.24 |
| OQU89872 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 55.14 | 54.96 |
| Zm00001d021448_P002 | Maize | mitochondrion | 54.81 | 54.71 |
| HORVU2Hr1G096100.42 | Barley | mitochondrion, plastid | 52.45 | 53.62 |
| HORVU7Hr1G058080.1 | Barley | plastid | 58.52 | 53.47 |
| Solyc10g074490.1.1 | Tomato | golgi | 55.82 | 51.32 |
| Solyc06g060750.2.1 | Tomato | mitochondrion | 46.71 | 51.3 |
| TraesCS2A01G405000.3 | Wheat | golgi | 53.79 | 50.96 |
| Solyc08g078540.2.1 | Tomato | mitochondrion, plastid | 47.39 | 47.47 |
| Solyc01g010930.2.1 | Tomato | cytosol, extracellular | 20.07 | 44.57 |
| Solyc11g005870.1.1 | Tomato | mitochondrion | 31.2 | 37.53 |
| Solyc05g013140.2.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 31.53 | 37.18 |
| Solyc06g069380.2.1 | Tomato | mitochondrion | 30.19 | 36.23 |
| Solyc03g114730.2.1 | Tomato | cytosol | 30.02 | 35.67 |
| Solyc12g038670.1.1 | Tomato | cytosol | 29.68 | 34.51 |
| Solyc04g074670.2.1 | Tomato | mitochondrion | 30.69 | 34.02 |
| Solyc03g096370.2.1 | Tomato | golgi, mitochondrion, nucleus | 26.64 | 29.98 |
| Solyc10g085050.1.1 | Tomato | cytosol | 27.99 | 27.53 |
| Solyc09g011860.2.1 | Tomato | plastid | 29.51 | 27.17 |
| Solyc07g041750.2.1 | Tomato | plastid | 28.84 | 26.47 |
| Solyc11g010230.1.1 | Tomato | nucleus | 5.23 | 22.79 |
| Solyc05g051500.2.1 | Tomato | nucleus, plastid | 5.23 | 22.79 |
| Solyc04g081150.2.1 | Tomato | nucleus, plastid | 5.23 | 22.79 |
| Solyc04g074580.1.1 | Tomato | nucleus, plastid | 5.23 | 22.79 |
Protein Annotations
| MapMan:35.1 | InterPro:FucosylTrfase_pln | InterPro:GDP-Fuc_O-FucTrfase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0006004 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016757 | UniProt:K4DH31 | PFAM:PF10250 | PIRSF:PIRSF009360 | PANTHER:PTHR31818 |
| PANTHER:PTHR31818:SF1 | EnsemblPlantsGene:Solyc12g094590.1 | EnsemblPlants:Solyc12g094590.1.1 | TMHMM:TMhelix | UniParc:UPI000276989A | SEG:seg |
Description
No Description!
Coordinates
chr12:-:64766874..64771816
Molecular Weight (calculated)
67916.8 Da
IEP (calculated)
9.075
GRAVY (calculated)
-0.641
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIPRRRHQH HHSRVRFLFP AIFAVSAIIL FLFLFLSILA PSPNDDNHLR HLRRDDSSEG KSRSNENRVS LSRVKINAEV HNRDLWSSKN SKFFYGCSNA
101: SSKFAKAKTI THPNRYLLIV TSGGLNQQRT GITDAVVAAR ILNATLVVPK LDKTSFWKDS SDFSDIFDVD WFIKHLTTDV TIIKDLPLRR GQIWTPHRMR
201: VPRKCSDRCY INRVLPVLMK RHAVQISKFD YRLANKLDTD LQKLRCRVNY HALKFADPIL KMGEKLVQRM RMSSKHYIAL HLRFEPDMLA FSGCYYGGGD
301: KERTELGKIR RRWKTLHNSN PEKARRQGRC PLTPEEVGLM LRALGYGEDV HIYVASGEVY GGEETLAPLK ALFPNFYSKD TIASKAELEP FSTYSSRMAA
401: LDFIVCDESD VFVTNNNGNM AKILAGRRRY FGHKPTIRPN AKKLNRVFLN RNNMTTEEFS SRVHTFQRGF MGDPKEVRPG RGEFHENPST CICEDAEAEK
501: KMDWDLRKSG KDNVAKKKDG NGRKKDIEAV VHDENVEYEP EMADPEDEEE DEDNPPGEVS LGNTKTEVLS NGTSTDYDSS MSEDTELDEL LSD
101: SSKFAKAKTI THPNRYLLIV TSGGLNQQRT GITDAVVAAR ILNATLVVPK LDKTSFWKDS SDFSDIFDVD WFIKHLTTDV TIIKDLPLRR GQIWTPHRMR
201: VPRKCSDRCY INRVLPVLMK RHAVQISKFD YRLANKLDTD LQKLRCRVNY HALKFADPIL KMGEKLVQRM RMSSKHYIAL HLRFEPDMLA FSGCYYGGGD
301: KERTELGKIR RRWKTLHNSN PEKARRQGRC PLTPEEVGLM LRALGYGEDV HIYVASGEVY GGEETLAPLK ALFPNFYSKD TIASKAELEP FSTYSSRMAA
401: LDFIVCDESD VFVTNNNGNM AKILAGRRRY FGHKPTIRPN AKKLNRVFLN RNNMTTEEFS SRVHTFQRGF MGDPKEVRPG RGEFHENPST CICEDAEAEK
501: KMDWDLRKSG KDNVAKKKDG NGRKKDIEAV VHDENVEYEP EMADPEDEEE DEDNPPGEVS LGNTKTEVLS NGTSTDYDSS MSEDTELDEL LSD
001: MNFHRRRYPY YNRLRRLLPL VIAVSLSLLI LFAFLSFLAP PPGDSDRLPP RVRYSSNDAI KATGFHIPRA GGRSDRDIWR SRNAEFFFGC SNASSKFANS
101: KAVTRNDRYL VIATSGGLNQ QRTGIVDAVV AARILNATLV VPKLDQKSYW KDASDFSHIF DVDWFISFLS GDVRIIKQLP LKGGRTWSTS RMRVPRKCNE
201: RCYINRVLPV LLKRHAVQLN KFDYRLSNKL SDDLQKLRCR VNYHALKFTD PILTMGNELV RRMRLRSKHF IALHLRYEPD MLAFSGCYYG GGDKERRELA
301: AIRRRWKTLH INNPEKQRRQ GRCPLTPEEV GLMLRALGYG SDVHIYVASG EVYGGEESLA PLKALFPHFY SKDTIATKEE LEPFSSYSSR MAALDFLVCD
401: ESDVFVTNNN GNMAKILAGR RRYLGHKPTV RPNAKKLYRL FMNKENTTWE EFSSKVRSFQ RGFMGEPKEV RAGRGEFHEN PSTCICEDTE AKAKAQLESR
501: KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS DLQDRGLYNG TSLDYDDPST SDEPELEAML SD
101: KAVTRNDRYL VIATSGGLNQ QRTGIVDAVV AARILNATLV VPKLDQKSYW KDASDFSHIF DVDWFISFLS GDVRIIKQLP LKGGRTWSTS RMRVPRKCNE
201: RCYINRVLPV LLKRHAVQLN KFDYRLSNKL SDDLQKLRCR VNYHALKFTD PILTMGNELV RRMRLRSKHF IALHLRYEPD MLAFSGCYYG GGDKERRELA
301: AIRRRWKTLH INNPEKQRRQ GRCPLTPEEV GLMLRALGYG SDVHIYVASG EVYGGEESLA PLKALFPHFY SKDTIATKEE LEPFSSYSSR MAALDFLVCD
401: ESDVFVTNNN GNMAKILAGR RRYLGHKPTV RPNAKKLYRL FMNKENTTWE EFSSKVRSFQ RGFMGEPKEV RAGRGEFHEN PSTCICEDTE AKAKAQLESR
501: KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS DLQDRGLYNG TSLDYDDPST SDEPELEAML SD
Arabidopsis Description
OFUT16O-fucosyltransferase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q949U4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.