Factsheet for Solyc05g013140.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
golgi 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072871	Potato	cytosol, extracellular	75.35	97.43
Solyc01g010930.2.1	Tomato	cytosol, extracellular	44.14	83.15
AT1G14020.1	Thale cress	cytosol, endoplasmic reticulum, golgi	73.96	74.55
KRH70785	Soybean	cytosol, nucleus, vacuole	73.56	73.12
KRG89556	Soybean	mitochondrion, plastid	52.29	73.06
KRH50557	Soybean	cytosol	72.37	72.95
KRH74924	Soybean	cytosol	73.36	72.92
Bra016714.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	72.17	72.89
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	72.17	72.89
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	72.17	72.75
CDY04145	Canola	cytosol	52.88	72.48
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	66.8	70.59
AT2G03280.2	Thale cress	cytosol, endoplasmic reticulum, golgi	69.18	68.5
GSMUA_Achr8P16870_001	Banana	endoplasmic reticulum, plasma membrane, plastid	65.81	67.69
EER92792	Sorghum	endoplasmic reticulum, golgi	60.64	66.59
TraesCS4A01G018000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	62.03	66.24
TraesCS4D01G284800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	61.43	65.61
TraesCS4B01G286100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	61.43	65.61
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	60.04	65.51
HORVU4Hr1G074960.11	Barley	endoplasmic reticulum, golgi, plasma membrane	61.03	65.46
Zm00001d048323_P001	Maize	endoplasmic reticulum, golgi, vacuole	59.24	65.07
Os03t0169000-01	Rice	endoplasmic reticulum, golgi, vacuole	60.24	65.02
Solyc06g069380.2.1	Tomato	mitochondrion	59.44	60.53
Solyc03g114730.2.1	Tomato	cytosol	58.65	59.12
Solyc12g038670.1.1	Tomato	cytosol	58.45	57.65
Zm00001d027842_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	59.44	55.06
Bra017390.1-P	Field mustard	nucleus	64.81	47.87
Solyc11g005870.1.1	Tomato	mitochondrion	39.96	40.77
Solyc04g074670.2.1	Tomato	mitochondrion	40.95	38.5
Solyc03g096370.2.1	Tomato	golgi, mitochondrion, nucleus	38.77	37.0
Solyc06g060750.2.1	Tomato	mitochondrion	36.18	33.7
Solyc01g112070.2.1	Tomato	nucleus	35.59	33.03
Solyc12g098400.1.1	Tomato	unclear	34.99	32.96
Solyc07g041750.2.1	Tomato	plastid	41.95	32.66
Solyc10g085050.1.1	Tomato	cytosol	38.77	32.34
Solyc09g011860.2.1	Tomato	plastid	40.76	31.83
Solyc12g094590.1.1	Tomato	unclear	37.18	31.53
Solyc08g078540.2.1	Tomato	mitochondrion, plastid	35.98	30.57
Solyc10g074490.1.1	Tomato	golgi	35.59	27.75
Solyc11g010230.1.1	Tomato	nucleus	6.16	22.79
Solyc05g051500.2.1	Tomato	nucleus, plastid	6.16	22.79
Solyc04g081150.2.1	Tomato	nucleus, plastid	6.16	22.79
Solyc04g074580.1.1	Tomato	nucleus, plastid	6.16	22.79

Protein Annotations

MapMan:21.3.2.1.1	Gene3D:3.40.50.11350	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006004
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
UniProt:K4BY35	PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF3	EnsemblPlantsGene:Solyc05g013140.2
EnsemblPlants:Solyc05g013140.2.1	TMHMM:TMhelix	UniParc:UPI0002765CBB	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:+:6230026..6235354

Molecular Weight (calculated)

58117.2 Da

IEP (calculated)

8.057

GRAVY (calculated)

-0.298

Length

503 amino acids

Sequence
(BLAST)

001: MEVRSESEVH VRSEKVLPLQ GQMIQRTRLK VYFVRVCSSI LIWTCLVQLI AVWELYNPRW FSGFTGYTTK VSVHVEETLP SPLLLLPPRN YTNNGFLQVS
101: CNGGLNQMRA AICDMVTVAR LLNLTLVVPE LDKTSFWADP SNFDDIFDVR HFIDSLRDEV RIIKRLPKRF SRRYGYQPLE MPPVSWSNEK YYLQQILPLF
201: KKHQVIHFNR TDTRLANNGI PLELQKLRCR VNFQALKFTP DIEALGEKLV RLLQERGPFV ALHLRYEMDM LAFSGCTHGC TEEEAEELKR LRYAFPWWRE
301: KEIVSEEKRS QGLCPLTPEE AALILQALGF DKDIQIYIAS GDIYGGERRL ASLRAAFPKI VKKDMLLAPG ELQHFQNHSS QMAALDFIVS TASNVFVPTY
401: DGNMAKVVEG HRRYLGFKKT ILLDRKRLVE LLDLHQNGTL SWDEFTATVR QSHEGRMGQL SRRRVIADKP KEEDYFYANP QECLCESKTC DDLFGPDNST
501: AVQ

Best Arabidopsis Sequence Match ( AT1G14020.1 )
(BLAST)

001: MEVRSESNIT QARSDKLPLP PAVPKPRVQV WFVRVCSSIL VWTCLVQLFA AGELWHSRIF TGLTNQISRF SAPVEPVPLP PPLPPPRNYT SNGILLVSCN
101: GGLNQMRSAI CDMVTVARLL NLTLVVPELD KTSFWADPSG FEDIFDVRHF IDSLRDEVRI LRRLPKRFSR KYGYQMFEMP PVSWSDEKYY LKQVLPLFSK
201: HKVVHFNRTD TRLANNGLPL SLQWLRCRVN FQGLKFTPQL EALGSKLVRI LQQRGPFVAL HLRYEMDMLA FSGCTHGCTE EEAEELKKMR YTYPWWREKE
301: IVSEERRAQG LCPLTPEEVA LVLKALGFEK NTQIYIAAGE IYGSEHRLSV LREAFPRIVK KEMLLESAEL QQFQNHSSQM AALDFMVSVA SNTFIPTYDG
401: NMAKVVEGHR RYLGYKKTIL LDRKRLVELL DLHHNKTLTW DQFAVAVKEA HERRAGAPTH RRVISDKPKE EDYFYANPQE CLCEGTNCHD LFGHRNLTH

Arabidopsis Description

OFUT3O-fucosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ51]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.