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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • endoplasmic reticulum 1
  • cytosol 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, golgi, plastid
Any Predictor:cytosol, endoplasmic reticulum, golgi, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:plastid
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04145 Canola cytosol 70.59 91.55
AT2G03280.2 Thale cress cytosol, endoplasmic reticulum, golgi 82.98 77.76
CDY62211 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 76.47 72.95
CDX96871 Canola cytosol, endoplasmic reticulum, nucleus, plastid 75.84 72.49
PGSC0003DMT400072871 Potato cytosol, extracellular 59.03 72.24
Solyc01g010930.2.1 Tomato cytosol, extracellular 40.34 71.91
Solyc05g013140.2.1 Tomato cytosol, endoplasmic reticulum, golgi 70.59 66.8
KRG89556 Soybean mitochondrion, plastid 49.37 65.28
KRH74924 Soybean cytosol 68.49 64.43
KRH70785 Soybean cytosol, nucleus, vacuole 68.07 64.03
CDY36425 Canola cytosol, endoplasmic reticulum, plasma membrane 61.97 63.99
KRH50557 Soybean cytosol 66.39 63.33
EER92792 Sorghum endoplasmic reticulum, golgi 59.66 62.01
GSMUA_Achr8P16870_001 Banana endoplasmic reticulum, plasma membrane, plastid 63.24 61.55
Zm00001d048323_P001 Maize endoplasmic reticulum, golgi, vacuole 58.4 60.7
Os03t0169000-01 Rice endoplasmic reticulum, golgi, vacuole 59.03 60.3
TraesCS4A01G018000.1 Wheat endoplasmic reticulum, golgi, mitochondrion 58.82 59.45
TraesCS4B01G286100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 58.4 59.02
HORVU4Hr1G074960.11 Barley endoplasmic reticulum, golgi, plasma membrane 57.98 58.85
TraesCS4D01G284800.1 Wheat endoplasmic reticulum, golgi, plasma membrane 58.19 58.81
CDY43245 Canola cytosol 53.78 56.89
CDY60465 Canola mitochondrion 53.57 56.67
CDX70647 Canola golgi 55.88 52.47
CDX78650 Canola golgi 55.67 52.17
CDX70637 Canola golgi 55.88 52.16
CDY24821 Canola cytosol, endoplasmic reticulum, golgi 55.88 51.65
CDY26456 Canola golgi 55.04 51.57
CDX74265 Canola cytosol, endoplasmic reticulum, golgi 55.67 51.56
CDX69504 Canola golgi 54.83 51.28
CDX91985 Canola golgi 55.25 51.17
Zm00001d027842_P003 Maize endoplasmic reticulum, golgi, plasma membrane 57.98 50.83
CDY34715 Canola cytosol, endoplasmic reticulum, golgi 40.34 49.48
CDY34713 Canola cytosol 47.27 48.28
CDX81230 Canola mitochondrion 41.39 38.7
CDY18704 Canola mitochondrion 41.18 38.36
CDY69289 Canola cytosol 31.09 37.37
CDY04814 Canola golgi 41.18 35.25
CDY53645 Canola mitochondrion 38.45 34.53
CDY50845 Canola cytosol, endoplasmic reticulum, golgi, plastid 38.45 34.4
CDY32271 Canola plastid 39.08 33.82
CDY40517 Canola mitochondrion 39.08 33.76
CDX90501 Canola mitochondrion 38.66 33.27
CDY60713 Canola mitochondrion 38.03 32.73
CDY64279 Canola golgi 35.29 30.43
CDY54803 Canola golgi 35.29 30.43
CDX87622 Canola nucleus 35.71 30.25
CDX74650 Canola nucleus, plastid 40.34 30.05
CDY33687 Canola nucleus, plastid 40.55 30.02
CDY31477 Canola extracellular, golgi, plasma membrane 35.5 29.96
CDY29524 Canola extracellular, golgi, plasma membrane 35.29 29.79
CDX73250 Canola golgi 36.13 29.6
CDY55908 Canola plastid 38.66 28.84
CDX78207 Canola plastid 38.87 28.68
CDX73509 Canola plastid 38.66 28.57
CDY40321 Canola plastid 39.08 28.53
CDY10480 Canola plastid 38.87 28.24
CDY18412 Canola plastid 41.6 27.5
CDX93336 Canola plastid 41.18 26.96
CDY07758 Canola plastid 40.13 26.6
CDY14499 Canola plastid 39.92 26.46
CDY48112 Canola cytosol, mitochondrion, peroxisome, plasma membrane, plastid 31.51 25.68
CDY13557 Canola nucleus, plastid 6.93 24.26
CDX85906 Canola nucleus, plastid 6.93 24.26
CDX85735 Canola nucleus, plastid 6.93 24.26
CDX78406 Canola nucleus, plastid 6.93 24.26
CDY69490 Canola nucleus, plastid 6.93 24.26
CDY68289 Canola nucleus, plastid 6.93 24.26
CDY39044 Canola nucleus, plastid 6.93 24.26
CDX70375 Canola nucleus, plastid 6.93 24.26
CDX69362 Canola nucleus, plastid 6.93 24.26
CDX68121 Canola nucleus, plastid 6.93 24.26
Protein Annotations
KEGG:00052+2.4.1.22KEGG:00514+2.4.1.221MapMan:21.3.2.1.1GO:A0A078JFN6UniProt:A0A078JFN6EnsemblPlants:CDY64492
ProteinID:CDY64492ProteinID:CDY64492.1InterPro:FucosylTrfase_plnInterPro:GDP-Fuc_O-FucTrfaseGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005975GO:GO:0006004GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016757EnsemblPlantsGene:GSBRNA2T00042289001PFAM:PF10250PIRSF:PIRSF009360
PANTHER:PTHR31741PANTHER:PTHR31741:SF3TMHMM:TMhelixUniPathway:UPA00378UniParc:UPI0004EAF300SEG:seg
Description
BnaC09g52330DBnaC09g52330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFN6]
Coordinates
chrLK034475:+:1764..3756
Molecular Weight (calculated)
55228.1 Da
IEP (calculated)
9.855
GRAVY (calculated)
-0.403
Length
476 amino acids
Sequence
(BLAST)
001: MEIQIRSESS QTHNKPPSPR VTKTRSQVWF FRVCSCILVW TCLFQLFTGL TNQISRFSLP VEPVRLPPLL PPRRNYTSNG ILRVSCNGGL NQMRAAICDM
101: VTIARLLNLT LVVPELDKKS FWADPSDFED VFDINHFIDS LRDEVRIIKR LPSKKYGYKL FQMPPVSWSN EKYYLHKLLP RFRKHKVIHF NRSDTRLANN
201: GLSLHLQRLR CRVNFQGLRF TPRIEALGAK LVQILQQRGP FVALHLRYEM DMLAFSGCTH GCTEKEAEEL RKMRCAYPWW KEKEIVSEER RVQGRCPLTP
301: EEAVLVLKAL GFQKDTQIYI AAGDIYGGER RLALLKESFP RIVKKEMLLD PKELQQFQNH SSQMAALDFI VSVASDNFIP TYYGNMAKVV EGHRRYLGFK
401: KTILLNQKRL VEVLDLHKNK TLSWDQFAVS AKEAHEGRRM GEPTHRKVIS DKPKEEDYFY ANPHECIGEG PSTLTD
Best Arabidopsis Sequence Match ( AT2G03280.1 )
(BLAST)
001: MSVVVGDRSE STLMRSDYKA PPSQAIPKAR LQVWFFRVCS CILVWTCLIQ LFWHSQIFTG LTNHISRFSL PVQSVPLPPP LPPRNYTSNG ILLVSCNGGL
101: NQMRAAICDM VTVARLLNLT LVVPELDKKS FWADTSDFED IFDIKHFIDS LRDEVRIIRR LPKRYSKKYG FKLFEMPPVS WSNDKYYLQQ VLPRFSKRKV
201: IHFVRSDTRL ANNGLSLDLQ RLRCRVNFQG LRFTPRIEAL GSKLVRILQQ RGSFVALHLR YEMDMLAFSG CTHGCTDEEA EELKKMRYAY PWWREKEIVS
301: EERRVQGLCP LTPEEAVLVL KALGFQKDTQ IYIAAGEIFG GAKRLALLKE SFPRIVKKEM LLDPTELQQF QNHSSQMAAL DFIVSVASNT FIPTYYGNMA
401: KVVEGHRRYL GFKKTILLDR KRLVELLDLH NNKTLSWDQF AVAVKDAHQG RRMGEPTHRK VISVRPKEED YFYANPQECI S
Arabidopsis Description

SUBAcon: [endoplasmic reticulum,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.