CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78207	Canola	plastid	97.98	97.83
AT3G54100.1	Thale cress	cytosol	84.63	85.42
KRH65987	Soybean	cytosol	52.8	69.39
Os05t0451900-01	Rice	cytosol	43.17	66.19
CDY18412	Canola	plastid	71.74	64.17
CDX93336	Canola	plastid	72.36	64.1
CDY14499	Canola	plastid	70.34	63.09
CDY07758	Canola	plastid	70.19	62.95
VIT_08s0007g01650.t01	Wine grape	plastid	59.78	62.3
KRH75793	Soybean	plastid	60.56	61.03
OQU87869	Sorghum	mitochondrion	43.48	59.7
PGSC0003DMT400028801	Potato	plastid	56.99	57.25
PGSC0003DMT400052382	Potato	plastid	56.99	57.17
Solyc10g085050.1.1	Tomato	cytosol	53.42	57.05
Solyc09g011860.2.1	Tomato	plastid	56.99	56.99
TraesCS3B01G397600.1	Wheat	plastid	47.05	55.09
CDY55908	Canola	plastid	54.5	55.02
TraesCS3A01G365800.1	Wheat	plastid	47.05	54.5
TraesCS3D01G358900.2	Wheat	plastid	46.58	54.35
GSMUA_Achr5P28820_001	Banana	plastid	43.94	53.6
CDY40321	Canola	plastid	53.11	52.45
HORVU1Hr1G073150.1	Barley	plastid	48.76	52.42
CDY10480	Canola	plastid	53.11	52.21
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	46.89	51.98
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	47.05	51.88
TraesCS1B01G288800.1	Wheat	plastid	48.6	51.82
TraesCS1A01G279800.1	Wheat	plastid	48.6	51.48
TraesCS1D01G279000.1	Wheat	plastid	44.88	50.7
Zm00001d038263_P001	Maize	plastid	45.03	50.61
KXG22127	Sorghum	plastid	47.98	50.57
Zm00001d012362_P001	Maize	plastid	42.24	49.91
Zm00001d010112_P001	Maize	cytosol, plastid	44.72	49.83
Os01t0851100-02	Rice	plastid	31.99	48.13
CDX74650	Canola	nucleus, plastid	44.25	44.6
CDY33687	Canola	nucleus, plastid	44.1	44.17
CDY60465	Canola	mitochondrion	30.43	43.56
CDY43245	Canola	cytosol	30.28	43.33
CDY04145	Canola	cytosol	24.38	42.78
CDY18704	Canola	mitochondrion	33.7	42.47
CDX81230	Canola	mitochondrion	33.54	42.44
CDX70637	Canola	golgi	31.99	40.39
CDX78650	Canola	golgi	31.83	40.35
CDX70647	Canola	golgi	31.52	40.04
CDY26456	Canola	golgi	31.21	39.57
CDX69504	Canola	golgi	31.21	39.49
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	30.43	39.28
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	30.28	39.16
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	28.57	38.66
CDX74265	Canola	cytosol, endoplasmic reticulum, golgi	30.75	38.52
CDY24821	Canola	cytosol, endoplasmic reticulum, golgi	30.59	38.25
CDX91985	Canola	golgi	30.43	38.13
CDY04814	Canola	golgi	31.68	36.69
CDY34713	Canola	cytosol	26.4	36.48
CDY34715	Canola	cytosol, endoplasmic reticulum, golgi	21.89	36.34
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	25.93	36.23
CDY53645	Canola	mitochondrion	27.8	33.77
CDY50845	Canola	cytosol, endoplasmic reticulum, golgi, plastid	27.8	33.65
CDY32271	Canola	plastid	27.8	32.55
CDY40517	Canola	mitochondrion	27.8	32.49
CDY60713	Canola	mitochondrion	27.8	32.37
CDX90501	Canola	mitochondrion	27.8	32.37
CDY29524	Canola	extracellular, golgi, plasma membrane	28.11	32.09
CDY31477	Canola	extracellular, golgi, plasma membrane	27.95	31.91
CDY69289	Canola	cytosol	19.57	31.82
CDX73250	Canola	golgi	27.95	30.98
CDY64279	Canola	golgi	26.24	30.62
CDY54803	Canola	golgi	26.09	30.43
CDX87622	Canola	nucleus	26.09	29.89
CDX85735	Canola	nucleus, plastid	5.75	27.21
CDX85906	Canola	nucleus, plastid	5.75	27.21
CDX78406	Canola	nucleus, plastid	5.75	27.21
CDY69490	Canola	nucleus, plastid	5.75	27.21
CDY68289	Canola	nucleus, plastid	5.75	27.21
CDX70375	Canola	nucleus, plastid	5.75	27.21
CDX69362	Canola	nucleus, plastid	5.75	27.21
CDY13557	Canola	nucleus, plastid	5.75	27.21
CDY39044	Canola	nucleus, plastid	5.75	27.21
CDX68121	Canola	nucleus, plastid	5.75	27.21

Protein Annotations

EnsemblPlants:CDX73509	EnsemblPlantsGene:GSBRNA2T00109025001	GO:A0A078CBC3	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	KEGG:00052+2.4.1.22
KEGG:00514+2.4.1.221	ncoils:Coil	PANTHER:PTHR31741	PANTHER:PTHR31741:SF4	PFAM:PF10250	PIRSF:PIRSF009360
ProteinID:CDX73509	ProteinID:CDX73509.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EEAE90	UniPathway:UPA00378
MapMan:35.1	:	:	:	:	:

Description

BnaC08g24940D

Coordinates

chrLK031799:+:794437..798159

Molecular Weight (calculated)

72565.5 Da

IEP (calculated)

9.172

GRAVY (calculated)

-0.429

Length

644 amino acids

Sequence
(BLAST)

001: MSVAGAINPL PAAPVPSGPT TTTRRRVDVV SERPLNPADF CSTVNLATGN ESAELDGGDT SGQDAASSEG SSSTGSHYHH DHYHQFHNHP AIHYLFLRKF
101: RSPFSQGGGG GGSGTVVGQG FRSGKNVGRR ILGLLMSLVV ASVFLSVYLI GGVRVVDHAR LSEFVVVRSL RDDLSMAQRE LGENQASSQP MRVLEKLPIP
201: EIWQKPESGQ YRQCVARPKN KTRPGQKTNG YLIVHANGGL NQMRTGICDM VAVAKIMNAT LVLPLLDHES FWTDPSTFKD IFDWRNFMNV LKHDVDIVEY
301: LPPEYADMKP LLKAPVSWSK ASYYRSEMLP LLKRYKVLKF MLTDSRLANN GLPPSIQRLR CRANYKALVY TKEIEDFGKV LVNRLRNNSE PYIALHLRYE
401: KDMLAFTGCS HNLTSEEAED LRIMRYNVKH WKEKEIDSIE RRIEGGCPMS PREAVIFLKA MGYPSSTTVY IVAGEIYGSK SMDAFRAEYP NVFSHSTLAT
501: EEELEPFSPY QNRLAALDYI VALESDVFVY TYDGNMAKAV QGHRRFEGFR KSINPDRLNF VRLIDHFDDG FISWEEFASE VKRLNRDRTG APYARLPAAL
601: PRLEENFYAN PQPDCICNKS YSRSSGKKSS LRTETKTWKK SALR

Best Arabidopsis Sequence Match ( AT3G54100.1 )
(BLAST)

001: MSVVGAINPV PIAPTTRRRV GDSLDVISER PSNSSDYCNT INQPIVGSTD LDGGDATGQD SSPSSESSAS STGSHYHHDH YHRFYSHPVI RYLLLRKFWI
101: PFYGGASTVV IGQGFRSGRN VGRRILGLLM LLVVASVFLR VYLMGGVRVV DHARLKEFVV VRTLRDDWSM AQREVAENQA SSQPMRVLEK LPIPEIWQKP
201: ESGNYRQCVT RPKNYTRLQR QTNGYLVVHA NGGLNQMRTG ICDMVAVAKI MNATLVLPLL DHESFWTDPS TFKDIFDWRN FMNVLKHDVD IVEYLPPQYA
301: AMKPLLKAPV SWSKASYYRS EMLPLLKRHK VLKFTLTDSR LANNGLPPSI QRLRCRANYQ ALLYTKEIED LGKILVNRLR NNTEPYIALH LRYEKDMLAF
401: TGCNHNLTTE EAEELRIMRY SVKHWKEKEI DSRERRIQGG CPMSPREAAI FLKAMGYPSS TTVYIVAGEI YGSESMDAFR AEYPNVFSHS TLATEEELEP
501: FSQYQNRLAA LDYIVALESD VFVYTYDGNM AKAVQGHRKF EGFRKSINPD RLNFVRLIDH FDEGIISWEE FSSEVKRLNR DRIGAAYGRL PAALPRLEEN
601: FYANPQPDCI CNKSHPEQLR KQSSLRTDSK SWKKSALR

Arabidopsis Description

OFUT28O-fucosyltransferase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9M393]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.