Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plastid 3
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40321 | Canola | plastid | 92.37 | 92.79 |
| CDY55908 | Canola | plastid | 81.68 | 83.86 |
| AT5G01100.1 | Thale cress | plastid | 80.76 | 83.84 |
| CDY48112 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 71.76 | 80.48 |
| KRH65987 | Soybean | cytosol | 45.95 | 61.43 |
| Os05t0451900-01 | Rice | cytosol | 39.24 | 61.19 |
| OQU87869 | Sorghum | mitochondrion | 40.92 | 57.14 |
| VIT_08s0007g01650.t01 | Wine grape | plastid | 52.98 | 56.15 |
| CDX78207 | Canola | plastid | 52.37 | 53.18 |
| CDX73509 | Canola | plastid | 52.21 | 53.11 |
| KRH75793 | Soybean | plastid | 50.53 | 51.8 |
| TraesCS3B01G397600.1 | Wheat | plastid | 43.21 | 51.45 |
| PGSC0003DMT400028801 | Potato | plastid | 50.23 | 51.33 |
| TraesCS3D01G358900.2 | Wheat | plastid | 43.21 | 51.27 |
| PGSC0003DMT400052382 | Potato | plastid | 50.23 | 51.25 |
| Solyc09g011860.2.1 | Tomato | plastid | 50.23 | 51.09 |
| TraesCS3A01G365800.1 | Wheat | plastid | 43.21 | 50.9 |
| Solyc10g085050.1.1 | Tomato | cytosol | 45.5 | 49.42 |
| HORVU1Hr1G073150.1 | Barley | plastid | 44.73 | 48.91 |
| Zm00001d038263_P001 | Maize | plastid | 42.6 | 48.69 |
| TraesCS1B01G288800.1 | Wheat | plastid | 44.89 | 48.68 |
| GSMUA_Achr5P28820_001 | Banana | plastid | 38.93 | 48.3 |
| CDY18412 | Canola | plastid | 52.82 | 48.06 |
| Zm00001d012362_P001 | Maize | plastid | 39.85 | 47.89 |
| TraesCS1A01G279800.1 | Wheat | plastid | 44.43 | 47.86 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plasma membrane, plastid | 42.44 | 47.85 |
| CDX93336 | Canola | plastid | 52.82 | 47.59 |
| KXG22127 | Sorghum | plastid | 44.12 | 47.3 |
| TraesCS1D01G279000.1 | Wheat | plastid | 40.76 | 46.84 |
| Zm00001d010112_P001 | Maize | cytosol, plastid | 40.92 | 46.37 |
| Os01t0851100-02 | Rice | plastid | 30.23 | 46.26 |
| CDY60465 | Canola | mitochondrion | 31.6 | 46.0 |
| CDY14499 | Canola | plastid | 50.23 | 45.82 |
| CDY43245 | Canola | cytosol | 31.45 | 45.78 |
| CDY07758 | Canola | plastid | 50.08 | 45.68 |
| CDX74650 | Canola | nucleus, plastid | 42.6 | 43.66 |
| CDY33687 | Canola | nucleus, plastid | 42.6 | 43.39 |
| CDY04145 | Canola | cytosol | 23.82 | 42.51 |
| CDX78650 | Canola | golgi | 32.67 | 42.13 |
| CDY18704 | Canola | mitochondrion | 32.82 | 42.07 |
| CDX81230 | Canola | mitochondrion | 32.67 | 42.04 |
| CDX70647 | Canola | golgi | 32.37 | 41.81 |
| CDX70637 | Canola | golgi | 32.37 | 41.57 |
| CDY26456 | Canola | golgi | 31.91 | 41.14 |
| CDX69504 | Canola | golgi | 31.91 | 41.06 |
| CDX74265 | Canola | cytosol, endoplasmic reticulum, golgi | 31.91 | 40.66 |
| CDX91985 | Canola | golgi | 31.6 | 40.27 |
| CDY24821 | Canola | cytosol, endoplasmic reticulum, golgi | 31.6 | 40.19 |
| CDY62211 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 30.08 | 39.48 |
| CDX96871 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 29.92 | 39.36 |
| CDY64492 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 28.24 | 38.87 |
| CDY34713 | Canola | cytosol | 27.33 | 38.41 |
| CDY34715 | Canola | cytosol, endoplasmic reticulum, golgi | 22.6 | 38.14 |
| CDY36425 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 25.65 | 36.44 |
| CDY04814 | Canola | golgi | 30.84 | 36.33 |
| CDY69289 | Canola | cytosol | 19.54 | 32.32 |
| CDY50845 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 25.5 | 31.39 |
| CDY53645 | Canola | mitochondrion | 25.34 | 31.32 |
| CDY32271 | Canola | plastid | 25.65 | 30.55 |
| CDY64279 | Canola | golgi | 25.65 | 30.43 |
| CDY54803 | Canola | golgi | 25.65 | 30.43 |
| CDY40517 | Canola | mitochondrion | 25.5 | 30.31 |
| CDX90501 | Canola | mitochondrion | 25.5 | 30.2 |
| CDY31477 | Canola | extracellular, golgi, plasma membrane | 25.95 | 30.14 |
| CDY29524 | Canola | extracellular, golgi, plasma membrane | 25.95 | 30.14 |
| CDY60713 | Canola | mitochondrion | 25.34 | 30.02 |
| CDX73250 | Canola | golgi | 25.65 | 28.92 |
| CDX87622 | Canola | nucleus | 23.97 | 27.94 |
| CDX78406 | Canola | nucleus, plastid | 4.58 | 22.06 |
| CDX85735 | Canola | nucleus, plastid | 4.58 | 22.06 |
| CDY39044 | Canola | nucleus, plastid | 4.58 | 22.06 |
| CDX85906 | Canola | nucleus, plastid | 4.58 | 22.06 |
| CDY69490 | Canola | nucleus, plastid | 4.58 | 22.06 |
| CDX70375 | Canola | nucleus, plastid | 4.58 | 22.06 |
| CDX69362 | Canola | nucleus, plastid | 4.58 | 22.06 |
| CDY13557 | Canola | nucleus, plastid | 4.58 | 22.06 |
| CDY68289 | Canola | nucleus, plastid | 4.58 | 22.06 |
| CDX68121 | Canola | nucleus, plastid | 4.58 | 22.06 |
Protein Annotations
| KEGG:00052+2.4.1.22 | KEGG:00514+2.4.1.221 | Gene3D:3.40.50.11350 | MapMan:35.1 | GO:A0A078F7L3 | UniProt:A0A078F7L3 |
| EnsemblPlants:CDY10480 | ProteinID:CDY10480 | ProteinID:CDY10480.1 | InterPro:FucosylTrfase_pln | InterPro:GDP-Fuc_O-FucTrfase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006004 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | EnsemblPlantsGene:GSBRNA2T00032414001 | PFAM:PF10250 |
| PIRSF:PIRSF009360 | PANTHER:PTHR31741 | PANTHER:PTHR31741:SF4 | TMHMM:TMhelix | UniPathway:UPA00378 | UniParc:UPI0004EF3DBB |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng03810DBnaCnng03810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7L3]
Coordinates
chrLK032003:-:764195..767378
Molecular Weight (calculated)
74201.8 Da
IEP (calculated)
9.041
GRAVY (calculated)
-0.415
Length
655 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVGVPVNTS SSSQLPAATT RRRVADSQED HCNFSTVGGG NAVVYVPDEE EATSCCSLSD GGGLSSCCPS GSHNNYLVGF LSLRKFRLVW MLMVDNKSQW
101: TAKNMRSASN LGRVILSLLG ILVFTFFLIV ALSGGRRQHV EEKHEFVFSI HPRNNIEKII REEESSSNSI QLLLPQRKPI PEIWNQPETG NYHKCLTRPK
201: NQRPIKQTNG YLVVHANGGL NQMRTGICDM VAIAKIMNAS LVLPFLDHSS FWSDPSTFKE IFDWRHFINV LAEDVNIVEY LPQELASIKP IEKNPVSWSK
301: ASYYRNSISK LLKKHKVIVF NHTDSRLANN SPPPSIQRLR CRANYEALRY SPEIENLSKV LTSRLRENNE PYLALHLRYE KDMLAFTGCD HSLTSEESID
401: LEKMRYSIPH WKEKVINGTE RRLEGNCPMT PREAAVFLKA MGFPSTTKIY IVAGEIYGEN SMNAFHQEFP NVFSHSTLAT EEELSTIKPY QNRLAALDYN
501: LALESDVFAY TYDGNMAKAV QGHRRFQGFR KTINPHRQRL VKLIDRLDAG LMSWEDFSSK VKRLHGKRLG APYVRRAGRA GLSPKLEENF YANPLPGCMC
601: DTSSDEPQQP RSINRFERPS LRQTEPIFLS KLTNPIKGER GTSICISLSF VNLEA
101: TAKNMRSASN LGRVILSLLG ILVFTFFLIV ALSGGRRQHV EEKHEFVFSI HPRNNIEKII REEESSSNSI QLLLPQRKPI PEIWNQPETG NYHKCLTRPK
201: NQRPIKQTNG YLVVHANGGL NQMRTGICDM VAIAKIMNAS LVLPFLDHSS FWSDPSTFKE IFDWRHFINV LAEDVNIVEY LPQELASIKP IEKNPVSWSK
301: ASYYRNSISK LLKKHKVIVF NHTDSRLANN SPPPSIQRLR CRANYEALRY SPEIENLSKV LTSRLRENNE PYLALHLRYE KDMLAFTGCD HSLTSEESID
401: LEKMRYSIPH WKEKVINGTE RRLEGNCPMT PREAAVFLKA MGFPSTTKIY IVAGEIYGEN SMNAFHQEFP NVFSHSTLAT EEELSTIKPY QNRLAALDYN
501: LALESDVFAY TYDGNMAKAV QGHRRFQGFR KTINPHRQRL VKLIDRLDAG LMSWEDFSSK VKRLHGKRLG APYVRRAGRA GLSPKLEENF YANPLPGCMC
601: DTSSDEPQQP RSINRFERPS LRQTEPIFLS KLTNPIKGER GTSICISLSF VNLEA
001: MSVGVPVNPS SSSQLPAAPT TTTRRRVADS QEDHSHVNTV GGGNAVVYVP DEEETATSCC GGGGGGGSLS CCPSGSHHNY LVGFLSLRKF RLVWMLMVEN
101: KSKWTAGIAR NMRSTTNLGR FILTLLSILV VTFFLIVALS GGVGRRRKHV EKHEFVVSIH PRPTIEKIIR EDESSNSFQV LVPKTTSIPE IWNQPEVGNY
201: QKCVARPKNQ RPIKQTNGYL LVHANGGLNQ MRTGICDMVA IAKIMNATLV LPFLDHSSFW SDPSSFKDIF DWKHFIKVLA EDVNIVEYLP QEFASIKPLE
301: KNPVSWSKSS YYRNSISKLL KKHKVIVFNH TDSRLANNSP PPSIQRLRCR ANYEALRYSE DIENLSNVLS SRLRENNEPY LALHLRYEKD MLAFTGCNHS
401: LSNEESIDLE KMRFSIPHWK EKVINGTERR LEGNCPMTPR EAAVFLKAMG FPSTTNIYIV AGKIYGQNSM TAFHEEFPNV FFHNTLATEE ELSTIKPYQN
501: RLAALDYNLA LESDIFAYTY DGNMAKAVQG HRRFEGFRKT INPDRQRFVR LIDRLDAGLI SWEDFSSKVK KMHQHRIGAP YLRQPGKAGM SPKLEENFYA
601: NPLPGCVCDT SEEQTGLNRF ERPSLRAQSL R
101: KSKWTAGIAR NMRSTTNLGR FILTLLSILV VTFFLIVALS GGVGRRRKHV EKHEFVVSIH PRPTIEKIIR EDESSNSFQV LVPKTTSIPE IWNQPEVGNY
201: QKCVARPKNQ RPIKQTNGYL LVHANGGLNQ MRTGICDMVA IAKIMNATLV LPFLDHSSFW SDPSSFKDIF DWKHFIKVLA EDVNIVEYLP QEFASIKPLE
301: KNPVSWSKSS YYRNSISKLL KKHKVIVFNH TDSRLANNSP PPSIQRLRCR ANYEALRYSE DIENLSNVLS SRLRENNEPY LALHLRYEKD MLAFTGCNHS
401: LSNEESIDLE KMRFSIPHWK EKVINGTERR LEGNCPMTPR EAAVFLKAMG FPSTTNIYIV AGKIYGQNSM TAFHEEFPNV FFHNTLATEE ELSTIKPYQN
501: RLAALDYNLA LESDIFAYTY DGNMAKAVQG HRRFEGFRKT INPDRQRFVR LIDRLDAGLI SWEDFSSKVK KMHQHRIGAP YLRQPGKAGM SPKLEENFYA
601: NPLPGCVCDT SEEQTGLNRF ERPSLRAQSL R
Arabidopsis Description
FRB1FRB1 [Source:UniProtKB/TrEMBL;Acc:A0A178U817]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.