CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
vacuole 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028889.1-P	Field mustard	plastid	98.59	99.68
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	84.8	92.64
AT5G01100.1	Thale cress	plastid	84.8	85.74
CDY10480	Canola	plastid	83.86	81.68
CDY40321	Canola	plastid	82.45	80.67
Os05t0451900-01	Rice	cytosol	41.07	62.38
KRH65987	Soybean	cytosol	47.49	61.84
OQU87869	Sorghum	mitochondrion	41.85	56.93
VIT_08s0007g01650.t01	Wine grape	plastid	53.6	55.34
CDX73509	Canola	plastid	55.02	54.5
CDX78207	Canola	plastid	54.86	54.26
KRH75793	Soybean	plastid	53.13	53.05
PGSC0003DMT400028801	Potato	plastid	52.35	52.11
PGSC0003DMT400052382	Potato	plastid	51.72	51.4
TraesCS3B01G397600.1	Wheat	plastid	44.2	51.27
TraesCS3D01G358900.2	Wheat	plastid	44.36	51.27
TraesCS3A01G365800.1	Wheat	plastid	44.67	51.26
Solyc09g011860.2.1	Tomato	plastid	51.72	51.24
Solyc10g085050.1.1	Tomato	cytosol	47.65	50.41
HORVU1Hr1G073150.1	Barley	plastid	47.02	50.08
TraesCS1B01G288800.1	Wheat	plastid	47.02	49.67
TraesCS1A01G279800.1	Wheat	plastid	46.71	49.01
Zm00001d038263_P001	Maize	plastid	43.89	48.87
Zm00001d012362_P001	Maize	plastid	41.69	48.81
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	44.2	48.54
CDY18412	Canola	plastid	54.7	48.47
GSMUA_Achr5P28820_001	Banana	plastid	39.97	48.3
KXG22127	Sorghum	plastid	45.77	47.79
TraesCS1D01G279000.1	Wheat	plastid	42.32	47.37
CDX93336	Canola	plastid	53.92	47.32
CDY14499	Canola	plastid	52.98	47.08
CDY07758	Canola	plastid	52.82	46.94
Zm00001d010112_P001	Maize	cytosol, plastid	42.48	46.89
Os01t0851100-02	Rice	plastid	31.35	46.73
CDY60465	Canola	mitochondrion	32.29	45.78
CDY43245	Canola	cytosol	32.13	45.56
CDX74650	Canola	nucleus, plastid	43.57	43.51
CDY18704	Canola	mitochondrion	34.64	43.25
CDY33687	Canola	nucleus, plastid	43.57	43.23
CDX81230	Canola	mitochondrion	34.48	43.22
CDY04145	Canola	cytosol	24.61	42.78
CDX78650	Canola	golgi	33.07	41.54
CDX70637	Canola	golgi	33.07	41.37
CDX70647	Canola	golgi	32.76	41.22
CDY26456	Canola	golgi	32.6	40.94
CDX69504	Canola	golgi	32.6	40.86
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	31.5	40.28
CDX74265	Canola	cytosol, endoplasmic reticulum, golgi	32.45	40.27
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	31.35	40.16
CDX91985	Canola	golgi	32.13	39.88
CDY24821	Canola	cytosol, endoplasmic reticulum, golgi	32.13	39.81
CDY34713	Canola	cytosol	28.37	38.84
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	28.84	38.66
CDY34715	Canola	cytosol, endoplasmic reticulum, golgi	22.88	37.63
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	26.65	36.88
CDY04814	Canola	golgi	32.13	36.87
CDY69289	Canola	cytosol	19.28	31.06
CDY50845	Canola	cytosol, endoplasmic reticulum, golgi, plastid	25.55	30.64
CDY53645	Canola	mitochondrion	25.24	30.38
CDY31477	Canola	extracellular, golgi, plasma membrane	26.33	29.79
CDY29524	Canola	extracellular, golgi, plasma membrane	26.33	29.79
CDX90501	Canola	mitochondrion	25.71	29.66
CDY32271	Canola	plastid	25.55	29.64
CDY40517	Canola	mitochondrion	25.55	29.58
CDY64279	Canola	golgi	25.55	29.53
CDY54803	Canola	golgi	25.55	29.53
CDY60713	Canola	mitochondrion	25.39	29.29
CDX73250	Canola	golgi	26.02	28.57
CDX87622	Canola	nucleus	24.45	27.76
CDX85735	Canola	nucleus, plastid	4.7	22.06
CDX78406	Canola	nucleus, plastid	4.7	22.06
CDX85906	Canola	nucleus, plastid	4.7	22.06
CDY69490	Canola	nucleus, plastid	4.7	22.06
CDY68289	Canola	nucleus, plastid	4.7	22.06
CDX70375	Canola	nucleus, plastid	4.7	22.06
CDX69362	Canola	nucleus, plastid	4.7	22.06
CDY39044	Canola	nucleus, plastid	4.7	22.06
CDY13557	Canola	nucleus, plastid	4.7	22.06
CDX68121	Canola	nucleus, plastid	4.7	22.06

Protein Annotations

KEGG:00052+2.4.1.22	KEGG:00514+2.4.1.221	Gene3D:3.40.50.11350	MapMan:35.1	GO:A0A078J1L4	UniProt:A0A078J1L4
EnsemblPlants:CDY55908	ProteinID:CDY55908	ProteinID:CDY55908.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSBRNA2T00017510001	PFAM:PF10250
PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF4	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EF3C17
SEG:seg	:	:	:	:	:

Description

BnaAnng14000DBnaAnng14000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1L4]

Coordinates

chrLK033438:+:50645..53053

Molecular Weight (calculated)

71850.8 Da

IEP (calculated)

9.263

GRAVY (calculated)

-0.429

Length

638 amino acids

Sequence
(BLAST)

001: MSVRVPVPSS SSQLPAAPTA TTTRRRVTDS QEDHCHVSTG GGGAVVYLPG DEEEATSSSG DEGGGGGSSS CCQSDSHHNY LVRFLSLRKI RLVWMLMADN
101: KSQWTAAMSR NVRSATNLGR MILSILGILV VTFFLVVALS GGGGGRRRHV EKHEFVVSIH PRSNMEKIIK EEESSSSSAR VLKHVTIPEI WNQPDTGNYQ
201: KCVARPKNQK PIKKTNGYLV VHANGGLNQM RTGICDMVAI AKIMNAALVL PFLDHSSFWS DPSTFKDIFD WRHFIQVLAE DVDIVEYLPQ EYASIKPLEK
301: NPVSWSKASY YRNSMTKLLK KHKVIVFNHT DSRLANNSPP PSIQRLRCRA NYEALRYSPE IENLSKVLSS RLRENNEPYL ALHLRYEKDM LAFTGCNHSL
401: TSEESIDLEK MRYSIPHWKE KVINGTEQRL EGNCPMTPRE AAVFLKAMGF PSTTKIYIVA GEIYGQNSMN AFHQEFPNVF FHSTLATEEE LSTIKPYQNR
501: LAALDYNLAL ESDVFAYTYD GNMAKAVQGH RRFEGFRKTI NPDRYRTASC VMLSFVKLID RFDAGLMSWE DFSSEVKRIH GKRLGAPYLR RPGKAGLSPK
601: LEENFYANPL PGCLCDTSDK QTGLNRFERP SLRAQSLR

Best Arabidopsis Sequence Match ( AT5G01100.1 )
(BLAST)

001: MSVGVPVNPS SSSQLPAAPT TTTRRRVADS QEDHSHVNTV GGGNAVVYVP DEEETATSCC GGGGGGGSLS CCPSGSHHNY LVGFLSLRKF RLVWMLMVEN
101: KSKWTAGIAR NMRSTTNLGR FILTLLSILV VTFFLIVALS GGVGRRRKHV EKHEFVVSIH PRPTIEKIIR EDESSNSFQV LVPKTTSIPE IWNQPEVGNY
201: QKCVARPKNQ RPIKQTNGYL LVHANGGLNQ MRTGICDMVA IAKIMNATLV LPFLDHSSFW SDPSSFKDIF DWKHFIKVLA EDVNIVEYLP QEFASIKPLE
301: KNPVSWSKSS YYRNSISKLL KKHKVIVFNH TDSRLANNSP PPSIQRLRCR ANYEALRYSE DIENLSNVLS SRLRENNEPY LALHLRYEKD MLAFTGCNHS
401: LSNEESIDLE KMRFSIPHWK EKVINGTERR LEGNCPMTPR EAAVFLKAMG FPSTTNIYIV AGKIYGQNSM TAFHEEFPNV FFHNTLATEE ELSTIKPYQN
501: RLAALDYNLA LESDIFAYTY DGNMAKAVQG HRRFEGFRKT INPDRQRFVR LIDRLDAGLI SWEDFSSKVK KMHQHRIGAP YLRQPGKAGM SPKLEENFYA
601: NPLPGCVCDT SEEQTGLNRF ERPSLRAQSL R

Arabidopsis Description

FRB1FRB1 [Source:UniProtKB/TrEMBL;Acc:A0A178U817]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.