Factsheet for TraesCS3D01G358900.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G365800.1	Wheat	plastid	98.37	97.66
TraesCS3B01G397600.1	Wheat	plastid	96.2	96.55
OQU87869	Sorghum	mitochondrion	67.93	79.96
Os01t0851100-02	Rice	plastid	55.8	71.96
Zm00001d012362_P001	Maize	plastid	67.75	68.62
TraesCS1D01G279000.1	Wheat	plastid	65.22	63.16
KRH65987	Soybean	cytosol	52.54	59.18
GSMUA_Achr5P28820_001	Banana	plastid	55.62	58.14
VIT_13s0019g03250.t01	Wine grape	cytosol	48.01	57.99
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	59.6	56.63
VIT_08s0007g01650.t01	Wine grape	plastid	57.25	51.13
KRH15012	Soybean	cytosol	48.37	50.95
KRH73118	Soybean	mitochondrion	47.1	49.62
Bra000033.1-P	Field mustard	plastid	55.43	48.8
AT2G37980.1	Thale cress	plastid	56.16	48.59
Solyc03g096370.2.1	Tomato	golgi, mitochondrion, nucleus	46.2	48.39
PGSC0003DMT400036338	Potato	cytosol, golgi, mitochondrion	46.74	48.22
Solyc09g011860.2.1	Tomato	plastid	55.98	47.98
PGSC0003DMT400052382	Potato	plastid	55.62	47.82
KRH75793	Soybean	plastid	54.71	47.26
PGSC0003DMT400028801	Potato	plastid	54.71	47.11
AT3G54100.1	Thale cress	cytosol	54.35	47.02
Bra007045.1-P	Field mustard	plastid	54.71	46.82
CDX78207	Canola	plastid	54.53	46.67
CDX73509	Canola	plastid	54.35	46.58
Solyc10g085050.1.1	Tomato	cytosol	50.36	46.1
Bra028889.1-P	Field mustard	plastid	51.45	45.01
AT5G01100.1	Thale cress	plastid	51.27	44.85
CDY55908	Canola	plastid	51.27	44.36
Bra009626.1-P	Field mustard	plastid	51.27	43.67
CDY40321	Canola	plastid	51.09	43.25
CDY10480	Canola	plastid	51.27	43.21
TraesCS2D01G352800.1	Wheat	mitochondrion	37.68	42.62
Bra017145.1-P	Field mustard	plastid	55.25	42.48
CDY18412	Canola	plastid	55.07	42.22
CDX93336	Canola	plastid	55.25	41.95
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	44.02	41.61
TraesCS3D01G095400.1	Wheat	mitochondrion	36.78	41.43
TraesCS4D01G284800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	35.14	41.19
CDY07758	Canola	plastid	53.44	41.09
CDY14499	Canola	plastid	53.44	41.09
TraesCS5D01G215300.3	Wheat	nucleus, plasma membrane, plastid	46.2	40.54
TraesCS6D01G268600.1	Wheat	mitochondrion	36.05	39.96
TraesCS7D01G215200.1	Wheat	mitochondrion, plastid	36.05	39.88
TraesCS5D01G259500.1	Wheat	golgi	36.05	39.56
TraesCS4D01G175500.2	Wheat	mitochondrion, plastid	35.51	39.36
TraesCS7D01G178800.1	Wheat	golgi	37.32	39.02
TraesCS2D01G410600.1	Wheat	plastid	30.07	32.81
TraesCS5D01G353700.1	Wheat	golgi	30.62	29.14
TraesCS2D01G401900.1	Wheat	golgi	30.07	28.97
TraesCS7D01G276100.1	Wheat	golgi	30.8	28.33
TraesCS2D01G316700.1	Wheat	nucleus, plastid	5.98	24.81
TraesCS7D01G159300.1	Wheat	nucleus, plastid	5.98	24.26
TraesCS7D01G432000.1	Wheat	nucleus, plastid	5.98	24.26
TraesCS7D01G158900.1	Wheat	nucleus, plastid	5.98	24.26
TraesCS7D01G061900.1	Wheat	nucleus, plastid	5.98	24.26
TraesCS7D01G061500.1	Wheat	nucleus, plastid	5.98	24.26

Protein Annotations

EnsemblPlants:TraesCS3D01G358900.2	EnsemblPlantsGene:TraesCS3D01G358900	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	PANTHER:PTHR31741	PANTHER:PTHR31741:SF20
PFAM:PF10250	PIRSF:PIRSF009360	SEG:seg	TIGR:cd11299	MapMan:35.1	:

Description

No Description!

Coordinates

chr3D:-:472402629..472406385

Molecular Weight (calculated)

62381.4 Da

IEP (calculated)

9.857

GRAVY (calculated)

-0.549

Length

552 amino acids

Sequence
(BLAST)

001: MAVAAAPAAA SSVGPDPSSS SVAHRRRLTD VERPDADGCG RHRGVRALFS VRRSYGKRAS SVVDQAWVRN AVASLLGLLV LVGLLGSHRA VGGGDGDGGR
101: LLRRVDGEAL GWREENLTAL ARRSPDTPIP KIWTMPASEG YSKCIERPRN HRRTNNATAG YIMVDANGGL NQMRMGISDM VAVAKLMNAT LVIPTLDHRS
201: FWTDPSDFED IFDVEHFKKT LENDIVIVDS LPPAYRRSKL YMRAPSSWSR ASYYRAFTRT LKKVKVVRFT HTDSRIVNNG LAPHIQQLRC RTNYEALKYK
301: KEIEDLGNTL VDRLRNGSNH YIALHLRYEK DMLSFTGCSH NLTRQEAEEL REMRLKVRHW KEKEINSKER RLQGGCPMTP REAALFLKAM GYPSTTNIYI
401: VAGEIYGGHS MDELKAAYPN VYTHYSLATV DELEPLKPYQ NRLAAVDYNV ALQSDVFVYT YDGNMAKAVQ GHRRFEGFRT TINPDRQKLV ELIDKLDEGT
501: ITWNDFQSKV KTHHENRLGG PYQRLSGQSP RQEEHFYANP LPGCLCKKTQ RI

Best Arabidopsis Sequence Match ( AT2G37980.1 )
(BLAST)

001: MSAAGASPLA VAPITAPTTT TRRRVGDSLE TTSERPSISS DYCNTNTVNI AISPDIDDGE TGLQGGACSS PSSIGSSSSG SHYHHDHHYH HHPTIRYFLL
101: RKLRLPFLFD GVGSTAVVGQ GWWLCSGRNV GRRILGLLMI FVVVSLFLRV SLMSGRVVDH AHRRDLNELV VMRALHEDWS MAQRAMTENV VIEKLPIPEI
201: WQKPESGNYR QCASRPKNRS RLRRKTNGYL LVHANGGLNQ MRTGICDMVA AAKIMNATLV LPLLDHESFW TDPSTFKDIF DWRHFMNVLK DDVDIVEYLP
301: PRYAAMRPLL KAPVSWSKAS YYRSEMLPLL KKHKVIKFTH TDSRLANNGL PPSIQRLRCR ANYQALGYSK EIEDFGKVLV NRLRNNSEPF IALHLRYEKD
401: MLAFTGCSHN LTAGEAEELR IMRYNVKHWK EKEIDSRERR IQGGCPMSPR EAAIFLKAMG YPSSTTVYIV AGEIYGGNSM DAFREEYPNV FAHSYLATEE
501: ELEPFKPYQN RLAALDYIVA LESDVFVYTY DGNMAKAVQG HRRFEGFKKT INPDRLNFVR LIDHLDEGVM SWDEFSSEVK RLHNNRIGAP YARLPGEFPR
601: LEENFYANPQ PDCICNKSQP EQLLKSRESD RWRKSASR

Arabidopsis Description

OFUT19O-fucosyltransferase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH89]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.