Factsheet for Bra009626.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
golgi 1
plastid 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40321	Canola	plastid	98.77	98.16
Bra028889.1-P	Field mustard	plastid	80.56	82.73
AT5G01100.1	Thale cress	plastid	79.63	81.78
Os05t0451900-01	Rice	cytosol	39.97	61.67
KRH65987	Soybean	cytosol	46.45	61.43
OQU87869	Sorghum	mitochondrion	41.98	58.0
VIT_08s0007g01650.t01	Wine grape	plastid	53.09	55.66
Bra000033.1-P	Field mustard	plastid	53.24	55.02
Bra007045.1-P	Field mustard	plastid	53.09	53.33
KRH75793	Soybean	plastid	51.23	51.96
PGSC0003DMT400052382	Potato	plastid	51.23	51.71
PGSC0003DMT400028801	Potato	plastid	51.08	51.64
TraesCS3B01G397600.1	Wheat	plastid	43.83	51.64
Solyc09g011860.2.1	Tomato	plastid	51.23	51.55
TraesCS3D01G358900.2	Wheat	plastid	43.67	51.27
TraesCS3A01G365800.1	Wheat	plastid	43.67	50.9
Solyc10g085050.1.1	Tomato	cytosol	46.45	49.92
HORVU1Hr1G073150.1	Barley	plastid	45.83	49.58
TraesCS1B01G288800.1	Wheat	plastid	45.99	49.34
Bra017145.1-P	Field mustard	plastid	54.32	49.03
Zm00001d012362_P001	Maize	plastid	41.2	48.99
Zm00001d038263_P001	Maize	plastid	43.21	48.87
GSMUA_Achr5P28820_001	Banana	plastid	39.66	48.67
TraesCS1A01G279800.1	Wheat	plastid	45.52	48.52
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	43.06	48.02
TraesCS1D01G279000.1	Wheat	plastid	41.98	47.72
KXG22127	Sorghum	plastid	44.75	47.46
Zm00001d010112_P001	Maize	cytosol, plastid	41.67	46.71
Os01t0851100-02	Rice	plastid	30.71	46.5
Bra035396.1-P	Field mustard	nucleus, plastid	43.67	44.29
Bra021472.1-P	Field mustard	mitochondrion	31.02	43.04
Bra037783.1-P	Field mustard	mitochondrion	33.49	42.72
Bra006319.1-P	Field mustard	golgi	33.49	42.72
Bra008679.1-P	Field mustard	golgi	32.56	41.45
Bra039166.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, mitochondrion	32.72	41.25
Bra001038.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, mitochondrion	32.25	40.66
Bra016714.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	30.4	39.56
Bra012697.1-P	Field mustard	endoplasmic reticulum	25.31	32.35
Bra040745.1-P	Field mustard	mitochondrion	25.46	31.19
Bra038495.1-P	Field mustard	plastid	26.08	30.73
Bra033562.1-P	Field mustard	golgi	26.08	30.67
Bra025826.1-P	Field mustard	extracellular, golgi, plasma membrane	26.54	30.44
Bra015771.1-P	Field mustard	golgi	26.23	29.26
Bra017390.1-P	Field mustard	nucleus	29.48	28.05
Bra003745.1-P	Field mustard	nucleus, plastid	4.78	22.79
Bra000032.1-P	Field mustard	extracellular	0.46	3.85

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra009626	EnsemblPlants:Bra009626.1	EnsemblPlants:Bra009626.1-P	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	UniProt:M4CZH9
PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF4	TMHMM:TMhelix	UniParc:UPI0002547E17
SEG:seg	:	:	:	:	:

Description

AT5G01100 (E=9e-271) | unknown protein

Coordinates

chrA10:-:17490639..17493820

Molecular Weight (calculated)

72859.9 Da

IEP (calculated)

9.037

GRAVY (calculated)

-0.392

Length

648 amino acids

Sequence
(BLAST)

001: MSVGVPVNTS SSSQLAAATT RRRVADSQED HCNVSSVGGG GNAVVYVPDE EEEATSCSSL SDGGGISSCC PSGSHNNYLV GFLSLRRVRL VWMLMVDNKS
101: QWTAKNMRSA SNLGRVILSL LGILVVTFFL IVAFSGGRRQ HEFVFSIHPR NSIEKIIREE ESSSSSIQLL LPRRKPIPEI WNQPDTGNYH KCLTRPKNQR
201: PIKQTNGYLV VHANGGLNQM RTGICDMVAI AKIMNASLVL PFLDHSSFWS DPSTFKDIFD WRHFINVLAE DVNIVEYLPQ ELASIKPLEK NPVSWSKASY
301: YRNSISKLLK KHKVIVFNHT DSRLANNSPP PSIQRLRCRA NYEALRYSPE IDNLSKVLTS RLRENNEPYL ALHLRYEKDM LAFTGCNHSL TSEESIALEK
401: MRYSIPHWKE KVINGTERRL EGNCPMTPRE AAVFLKAVGF PSSTKIYIVA GEIYGENSMT AFHQEFPNVF SHSTLATEEE LSTIKPYQNR LAALDYNVAL
501: ESDVFAYTYD GNMAKAVQGH RRFEGFRKTI NPDRQRLVKL IDRLDAGLMS WEDFSSKVKR LHGKRIGAPY VRRAGLSPKL EENFYANPLP GCLCDTSSDE
601: PRQPRGQTTS RASNLQTEQY SCLSSQTPLK EKRGTSICIS LSFVNLEA

Best Arabidopsis Sequence Match ( AT5G01100.1 )
(BLAST)

001: MSVGVPVNPS SSSQLPAAPT TTTRRRVADS QEDHSHVNTV GGGNAVVYVP DEEETATSCC GGGGGGGSLS CCPSGSHHNY LVGFLSLRKF RLVWMLMVEN
101: KSKWTAGIAR NMRSTTNLGR FILTLLSILV VTFFLIVALS GGVGRRRKHV EKHEFVVSIH PRPTIEKIIR EDESSNSFQV LVPKTTSIPE IWNQPEVGNY
201: QKCVARPKNQ RPIKQTNGYL LVHANGGLNQ MRTGICDMVA IAKIMNATLV LPFLDHSSFW SDPSSFKDIF DWKHFIKVLA EDVNIVEYLP QEFASIKPLE
301: KNPVSWSKSS YYRNSISKLL KKHKVIVFNH TDSRLANNSP PPSIQRLRCR ANYEALRYSE DIENLSNVLS SRLRENNEPY LALHLRYEKD MLAFTGCNHS
401: LSNEESIDLE KMRFSIPHWK EKVINGTERR LEGNCPMTPR EAAVFLKAMG FPSTTNIYIV AGKIYGQNSM TAFHEEFPNV FFHNTLATEE ELSTIKPYQN
501: RLAALDYNLA LESDIFAYTY DGNMAKAVQG HRRFEGFRKT INPDRQRFVR LIDRLDAGLI SWEDFSSKVK KMHQHRIGAP YLRQPGKAGM SPKLEENFYA
601: NPLPGCVCDT SEEQTGLNRF ERPSLRAQSL R

Arabidopsis Description

FRB1FRB1 [Source:UniProtKB/TrEMBL;Acc:A0A178U817]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.