Factsheet for Bra017390.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04145	Canola	cytosol	50.66	94.01
AT2G03280.2	Thale cress	cytosol, endoplasmic reticulum, golgi	55.21	74.02
PGSC0003DMT400072871	Potato	cytosol, extracellular	41.7	73.01
Solyc01g010930.2.1	Tomato	cytosol, extracellular	27.61	70.41
Bra016714.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	51.1	69.88
KRG89556	Soybean	mitochondrion, plastid	34.65	65.56
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	47.87	64.81
KRH50557	Soybean	cytosol	44.93	61.32
KRH74924	Soybean	cytosol	45.37	61.07
KRH70785	Soybean	cytosol, nucleus, vacuole	45.08	60.67
EER92792	Sorghum	endoplasmic reticulum, golgi	40.68	60.48
GSMUA_Achr8P16870_001	Banana	endoplasmic reticulum, plasma membrane, plastid	43.02	59.92
Zm00001d048323_P001	Maize	endoplasmic reticulum, golgi, vacuole	39.94	59.39
Os03t0169000-01	Rice	endoplasmic reticulum, golgi, vacuole	40.53	59.23
TraesCS4A01G018000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	40.38	58.39
TraesCS4D01G284800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	40.23	58.17
TraesCS4B01G286100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	40.23	58.17
HORVU4Hr1G074960.11	Barley	endoplasmic reticulum, golgi, plasma membrane	39.94	58.0
Bra021472.1-P	Field mustard	mitochondrion	36.42	53.1
Bra006319.1-P	Field mustard	golgi	38.47	51.57
Bra039166.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, mitochondrion	38.33	50.78
Bra001038.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, mitochondrion	38.18	50.58
Bra008679.1-P	Field mustard	golgi	37.74	50.49
Zm00001d027842_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	39.65	49.72
Bra037783.1-P	Field mustard	mitochondrion	28.93	38.78
Bra012697.1-P	Field mustard	endoplasmic reticulum	26.14	35.11
Bra040745.1-P	Field mustard	mitochondrion	26.14	33.65
Bra038495.1-P	Field mustard	plastid	26.58	32.91
Bra000033.1-P	Field mustard	plastid	29.52	32.06
Bra033562.1-P	Field mustard	golgi	24.82	30.67
Bra028889.1-P	Field mustard	plastid	28.34	30.59
Bra025826.1-P	Field mustard	extracellular, golgi, plasma membrane	24.96	30.09
Bra009626.1-P	Field mustard	plastid	28.05	29.48
Bra035396.1-P	Field mustard	nucleus, plastid	27.46	29.26
Bra015771.1-P	Field mustard	golgi	24.82	29.09
Bra007045.1-P	Field mustard	plastid	27.02	28.53
Bra017145.1-P	Field mustard	plastid	29.81	28.27
Bra003745.1-P	Field mustard	nucleus, plastid	4.7	23.53
Bra000032.1-P	Field mustard	extracellular	0.73	6.41

Protein Annotations

MapMan:21.3.2.1.1	EnsemblPlantsGene:Bra017390	EnsemblPlants:Bra017390.1	EnsemblPlants:Bra017390.1-P	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	UniProt:M4DLK9
PFAM:PF10250	PANTHER:PTHR31741	PANTHER:PTHR31741:SF3	TMHMM:TMhelix	UniParc:UPI000254224E	SEG:seg

Description

AT2G03280 (E=2e-207) | unknown protein

Coordinates

chrA09:+:14870095..14874846

Molecular Weight (calculated)

78994.6 Da

IEP (calculated)

9.417

GRAVY (calculated)

-0.513

Length

681 amino acids

Sequence
(BLAST)

001: MNNNAEAAQE EEFSEWVVIQ TSSTSSPVDA SSPLSSPISQ PSQGRDDDDE DSVVPVVEEE EEDESSSTVN QSFPWRVIET AKKRLKDSGI FERAPCNYVS
101: STRVFWSFTL ICGFSLVSSL VYVKIVRWWR RLQEEKLRFL LLQLKEKDQL FTGLTNQISR FSLPVEPVRL LPPRRNYTSN GILRVSCNGG LNQMRAAICD
201: MVTIARLLNL TLLVPELDKK SFWADPSDFE DVFDINHFID SLRDEVQIIR KLPKRYSRYK LFQMPPVSWS NEKYYLHKLL PRFRKHKVIH FNRSDTRLAN
301: NGLSLHLQRL RCRVNFQGLR FSPRIEALGA KLVSILQKRG PFVALHLRYE MDMLAFSGCT HGCTEKEAEE LKKMRYAYPW WKEKEIVSEE RRVQGRCPLT
401: PEEAVLVLKA LGFQKDTQIY IAAGDIYGGE RRLALLKESF PRIVKKEMLL DPKELQQFQN HSSQMAALDF IVSVASDTFI PNYYGNTAKV VEGHRIYHGF
501: KKTILLNRKR LVELLDLHKN KTLSWDQFAV YVKEAHEGRR MGEPTHRKVI SDKPKEEDYF YANPQEFTRV PTVNAHDHLC LLLNVTPRGV ASPRVSRRIR
601: LESSREPPLP DKSFFGDDSM ATTFSFCSLD NRLRGDIVFT RKLAAYKTPK TTMADRKAAR ERSNVRERER ERETDYLGSE W

Best Arabidopsis Sequence Match ( AT2G03280.1 )
(BLAST)

001: MSVVVGDRSE STLMRSDYKA PPSQAIPKAR LQVWFFRVCS CILVWTCLIQ LFWHSQIFTG LTNHISRFSL PVQSVPLPPP LPPRNYTSNG ILLVSCNGGL
101: NQMRAAICDM VTVARLLNLT LVVPELDKKS FWADTSDFED IFDIKHFIDS LRDEVRIIRR LPKRYSKKYG FKLFEMPPVS WSNDKYYLQQ VLPRFSKRKV
201: IHFVRSDTRL ANNGLSLDLQ RLRCRVNFQG LRFTPRIEAL GSKLVRILQQ RGSFVALHLR YEMDMLAFSG CTHGCTDEEA EELKKMRYAY PWWREKEIVS
301: EERRVQGLCP LTPEEAVLVL KALGFQKDTQ IYIAAGEIFG GAKRLALLKE SFPRIVKKEM LLDPTELQQF QNHSSQMAAL DFIVSVASNT FIPTYYGNMA
401: KVVEGHRRYL GFKKTILLDR KRLVELLDLH NNKTLSWDQF AVAVKDAHQG RRMGEPTHRK VISVRPKEED YFYANPQECI S

Arabidopsis Description

SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.