CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	91.55	70.59
Solyc01g010930.2.1	Tomato	cytosol, extracellular	50.95	70.04
PGSC0003DMT400072871	Potato	cytosol, extracellular	64.31	60.67
AT2G03280.2	Thale cress	cytosol, endoplasmic reticulum, golgi	83.92	60.63
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	76.57	56.31
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	76.02	56.02
KRG89556	Soybean	mitochondrion, plastid	52.04	53.06
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	72.48	52.88
EER92792	Sorghum	endoplasmic reticulum, golgi	64.31	51.53
KRH50557	Soybean	cytosol	69.75	51.3
Os03t0169000-01	Rice	endoplasmic reticulum, golgi, vacuole	64.58	50.86
KRH74924	Soybean	cytosol	70.03	50.79
KRH70785	Soybean	cytosol, nucleus, vacuole	70.03	50.79
Bra017390.1-P	Field mustard	nucleus	94.01	50.66
Zm00001d048323_P001	Maize	endoplasmic reticulum, golgi, vacuole	63.22	50.66
TraesCS4A01G018000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	64.31	50.11
TraesCS4B01G286100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	64.31	50.11
TraesCS4D01G284800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	64.03	49.89
HORVU4Hr1G074960.11	Barley	endoplasmic reticulum, golgi, plasma membrane	63.76	49.89
GSMUA_Achr8P16870_001	Banana	endoplasmic reticulum, plasma membrane, plastid	65.67	49.28
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	60.22	47.94
CDY43245	Canola	cytosol	58.58	47.78
CDY60465	Canola	mitochondrion	58.31	47.56
CDY34715	Canola	cytosol, endoplasmic reticulum, golgi	49.59	46.91
Zm00001d027842_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	62.67	42.36
CDX70647	Canola	golgi	58.31	42.21
CDY26456	Canola	golgi	58.31	42.13
CDX74265	Canola	cytosol, endoplasmic reticulum, golgi	58.86	42.02
CDX70637	Canola	golgi	58.31	41.96
CDY24821	Canola	cytosol, endoplasmic reticulum, golgi	58.86	41.94
CDX78650	Canola	golgi	58.04	41.93
CDX69504	Canola	golgi	58.04	41.85
CDX91985	Canola	golgi	58.31	41.63
CDY34713	Canola	cytosol	48.5	38.2
CDX81230	Canola	mitochondrion	46.87	33.79
CDY18704	Canola	mitochondrion	46.59	33.46
CDY69289	Canola	cytosol	34.33	31.82
CDY04814	Canola	golgi	46.05	30.4
CDY53645	Canola	mitochondrion	41.96	29.06
CDY50845	Canola	cytosol, endoplasmic reticulum, golgi, plastid	41.69	28.76
CDY32271	Canola	plastid	42.51	28.36
CDY40517	Canola	mitochondrion	42.51	28.31
CDX90501	Canola	mitochondrion	41.96	27.85
CDY60713	Canola	mitochondrion	41.42	27.49
CDX87622	Canola	nucleus	39.78	25.98
CDY64279	Canola	golgi	38.69	25.72
CDY54803	Canola	golgi	38.69	25.72
CDY31477	Canola	extracellular, golgi, plasma membrane	38.96	25.35
CDY29524	Canola	extracellular, golgi, plasma membrane	38.69	25.18
CDX73250	Canola	golgi	39.51	24.96
CDY55908	Canola	plastid	42.78	24.61
CDX78207	Canola	plastid	43.05	24.5
CDX73509	Canola	plastid	42.78	24.38
CDY33687	Canola	nucleus, plastid	42.23	24.11
CDX74650	Canola	nucleus, plastid	41.96	24.1
CDY40321	Canola	plastid	42.78	24.08
CDY10480	Canola	plastid	42.51	23.82
CDY18412	Canola	plastid	46.05	23.47
CDY07758	Canola	plastid	45.5	23.26
CDY14499	Canola	plastid	45.5	23.26
CDX93336	Canola	plastid	45.5	22.97
CDX68121	Canola	nucleus, plastid	7.9	21.32
CDX69362	Canola	nucleus, plastid	7.9	21.32
CDX85735	Canola	nucleus, plastid	7.9	21.32
CDX70375	Canola	nucleus, plastid	7.9	21.32
CDY69490	Canola	nucleus, plastid	7.9	21.32
CDY68289	Canola	nucleus, plastid	7.9	21.32
CDX78406	Canola	nucleus, plastid	7.9	21.32
CDY39044	Canola	nucleus, plastid	7.9	21.32
CDY13557	Canola	nucleus, plastid	7.9	21.32
CDX85906	Canola	nucleus, plastid	7.9	21.32
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	33.79	21.23

Protein Annotations

EnsemblPlants:CDY04145	EnsemblPlantsGene:GSBRNA2T00117815001	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	KEGG:00052+2.4.1.22	KEGG:00514+2.4.1.221
PANTHER:PTHR31741	PANTHER:PTHR31741:SF3	PFAM:PF10250	PIRSF:PIRSF009360	ProteinID:CDY04145	ProteinID:CDY04145.1
SEG:seg	UniParc:UPI0004EE2552	UniPathway:UPA00378	MapMan:21.3.2.1.1	:	:

Description

BnaA09g19230D

Coordinates

chrLK031949:-:610425..615716

Molecular Weight (calculated)

42879.3 Da

IEP (calculated)

10.104

GRAVY (calculated)

-0.325

Length

367 amino acids

Sequence
(BLAST)

001: MFFIGYQTHK DFAFETTLFT GLTNQISRFS LPVEPVRLLP PRRNYTSNGI LRVSCNGGLN QMRAAICDMV TIARLLNLTL LVPELDKKSF WADPSDFEDV
101: FDINHFIDSL RDEVRIIRKL PKRYSRYKLF QMPPVSWSNE KYYLHKLLPR FRKHKVIHFN RSDTRLANNG LSLHLQRLRC RVNFQGLRFT PRIEALGAKL
201: VQILQQRGPF VALHLRYEMD MLAFSGCTHG CTEKEAEELK KMRYAYPWWK EKEIVSKERR VQGRCPLTPE EAVLVLKALG FQKDTQIYIA AGDIYGGERR
301: LALLKESFPR IVKKEMLLDP KELQQFQNHS SQMAALDFIV SVASDTFIPT YYGNMAKVVE GHRRYFT

Best Arabidopsis Sequence Match ( AT2G03280.1 )
(BLAST)

001: MSVVVGDRSE STLMRSDYKA PPSQAIPKAR LQVWFFRVCS CILVWTCLIQ LFWHSQIFTG LTNHISRFSL PVQSVPLPPP LPPRNYTSNG ILLVSCNGGL
101: NQMRAAICDM VTVARLLNLT LVVPELDKKS FWADTSDFED IFDIKHFIDS LRDEVRIIRR LPKRYSKKYG FKLFEMPPVS WSNDKYYLQQ VLPRFSKRKV
201: IHFVRSDTRL ANNGLSLDLQ RLRCRVNFQG LRFTPRIEAL GSKLVRILQQ RGSFVALHLR YEMDMLAFSG CTHGCTDEEA EELKKMRYAY PWWREKEIVS
301: EERRVQGLCP LTPEEAVLVL KALGFQKDTQ IYIAAGEIFG GAKRLALLKE SFPRIVKKEM LLDPTELQQF QNHSSQMAAL DFIVSVASNT FIPTYYGNMA
401: KVVEGHRRYL GFKKTILLDR KRLVELLDLH NNKTLSWDQF AVAVKDAHQG RRMGEPTHRK VISVRPKEED YFYANPQECI S

Arabidopsis Description

SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.