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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • golgi 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, nucleus
BaCelLo:nucleus
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64279 Canola golgi 99.28 99.28
CDY69289 Canola cytosol 69.57 96.97
AT4G38390.1 Thale cress endoplasmic reticulum, nucleus, plasma membrane 82.79 82.94
GSMUA_Achr3P14740_001 Banana mitochondrion 55.98 59.2
GSMUA_Achr8P13270_001 Banana endoplasmic reticulum, golgi, plasma membrane 45.65 56.88
PGSC0003DMT400048017 Potato golgi 56.16 56.88
VIT_03s0038g03240.t01 Wine grape mitochondrion 60.69 56.59
Solyc01g112070.2.1 Tomato nucleus 55.43 56.46
KRH74090 Soybean endoplasmic reticulum, golgi, plasma membrane 56.34 55.73
CDY31477 Canola extracellular, golgi, plasma membrane 56.7 55.5
CDY29524 Canola extracellular, golgi, plasma membrane 56.52 55.32
KRH14026 Soybean golgi 56.7 55.2
Os04t0563000-01 Rice endoplasmic reticulum, golgi 54.35 54.35
EES15207 Sorghum golgi 55.8 53.2
CDX73250 Canola golgi 55.62 52.84
PGSC0003DMT400043331 Potato extracellular 51.81 52.77
TraesCS2D01G401900.1 Wheat golgi 54.71 52.71
KXG26900 Sorghum golgi 55.25 52.68
TraesCS2B01G423100.1 Wheat golgi 54.53 52.62
Os08t0554050-01 Rice golgi 56.88 52.6
Zm00001d002668_P004 Maize golgi 55.25 52.41
CDX87622 Canola nucleus 53.26 52.31
Zm00001d050483_P002 Maize golgi 54.71 52.16
TraesCS5B01G348700.1 Wheat golgi 54.71 52.07
HORVU5Hr1G086560.1 Barley golgi 54.35 51.81
TraesCS5D01G353700.1 Wheat golgi 54.35 51.72
TraesCS5A01G347600.2 Wheat golgi 54.71 51.54
GSMUA_Achr5P19070_001 Banana endoplasmic reticulum, golgi, plasma membrane 56.52 51.32
TraesCS7D01G276100.1 Wheat golgi 55.62 51.17
HORVU2Hr1G096100.42 Barley mitochondrion, plastid 53.08 50.52
TraesCS7A01G276200.2 Wheat golgi 54.89 50.33
TraesCS7B01G174000.1 Wheat golgi 55.07 50.33
Zm00001d021448_P002 Maize mitochondrion 53.62 49.83
OQU89872 Sorghum endoplasmic reticulum, golgi, plasma membrane 53.26 49.41
CDY53645 Canola mitochondrion 47.1 49.06
CDY50845 Canola cytosol, endoplasmic reticulum, golgi, plastid 46.92 48.68
Solyc10g074490.1.1 Tomato golgi 56.88 48.68
TraesCS2A01G405000.3 Wheat golgi 55.07 48.56
CDX90501 Canola mitochondrion 47.83 47.74
CDY60713 Canola mitochondrion 47.28 47.2
CDY40517 Canola mitochondrion 47.1 47.19
CDY32271 Canola plastid 46.92 47.09
HORVU7Hr1G058080.1 Barley plastid 54.89 46.69
CDY04145 Canola cytosol 25.72 38.69
CDY60465 Canola mitochondrion 30.43 37.33
CDY43245 Canola cytosol 30.25 37.11
CDX81230 Canola mitochondrion 33.33 36.15
CDY18704 Canola mitochondrion 33.33 36.01
CDX78650 Canola golgi 32.79 35.63
CDX70647 Canola golgi 32.61 35.5
CDY64492 Canola cytosol, endoplasmic reticulum, golgi, plastid 30.43 35.29
CDX70637 Canola golgi 32.61 35.29
CDX69504 Canola golgi 32.25 34.97
CDY26456 Canola golgi 32.07 34.84
CDY62211 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 30.98 34.27
CDX96871 Canola cytosol, endoplasmic reticulum, nucleus, plastid 30.8 34.14
CDX74265 Canola cytosol, endoplasmic reticulum, golgi 31.34 33.66
CDX91985 Canola golgi 31.34 33.66
CDY24821 Canola cytosol, endoplasmic reticulum, golgi 31.34 33.59
CDY34715 Canola cytosol, endoplasmic reticulum, golgi 23.37 33.25
CDY04814 Canola golgi 32.25 32.01
CDY34713 Canola cytosol 26.99 31.97
CDY36425 Canola cytosol, endoplasmic reticulum, plasma membrane 25.0 29.93
CDX74650 Canola nucleus, plastid 31.7 27.39
CDY33687 Canola nucleus, plastid 31.52 27.06
CDX73509 Canola plastid 30.43 26.09
CDY40321 Canola plastid 30.8 26.07
CDX78207 Canola plastid 30.43 26.05
CDY10480 Canola plastid 30.43 25.65
CDY55908 Canola plastid 29.53 25.55
CDY18412 Canola plastid 32.61 25.0
CDX93336 Canola plastid 32.61 24.76
CDY07758 Canola plastid 31.16 23.96
CDY14499 Canola plastid 31.16 23.96
CDY48112 Canola cytosol, mitochondrion, peroxisome, plasma membrane, plastid 24.82 23.46
CDX78406 Canola nucleus, plastid 5.43 22.06
CDX85735 Canola nucleus, plastid 5.43 22.06
CDX85906 Canola nucleus, plastid 5.43 22.06
CDY13557 Canola nucleus, plastid 5.43 22.06
CDY69490 Canola nucleus, plastid 5.43 22.06
CDY68289 Canola nucleus, plastid 5.43 22.06
CDX70375 Canola nucleus, plastid 5.43 22.06
CDY39044 Canola nucleus, plastid 5.43 22.06
CDX69362 Canola nucleus, plastid 5.43 22.06
CDX68121 Canola nucleus, plastid 5.43 22.06
Protein Annotations
KEGG:00052+2.4.1.22KEGG:00514+2.4.1.221MapMan:35.1GO:A0A078IXF0UniProt:A0A078IXF0EnsemblPlants:CDY54803
ProteinID:CDY54803ProteinID:CDY54803.1InterPro:FucosylTrfase_plnInterPro:GDP-Fuc_O-FucTrfaseGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005975GO:GO:0006004GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016757EnsemblPlantsGene:GSBRNA2T00014672001PFAM:PF10250PIRSF:PIRSF009360
PANTHER:PTHR31818PANTHER:PTHR31818:SF0TMHMM:TMhelixUniPathway:UPA00378UniParc:UPI0004EEA54ESEG:seg
Description
BnaA06g40960DBnaA06g40960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXF0]
Coordinates
chrLK033351:+:42330..44732
Molecular Weight (calculated)
62981.2 Da
IEP (calculated)
10.042
GRAVY (calculated)
-0.463
Length
552 amino acids
Sequence
(BLAST)
001: MASLNMKMKK RDNYGAEPDK KKLAMAGIRH QLLLLLRRRH RLFPLVSAFS GCLLLLLLFS FSFPPVIHHS PLGRKNQVAV ESKLLVPENG GRSDRHLWSS
101: KLSNSYYGCS NASGTFQVLD KTSQTDRYLL IATSGGLNQQ RTGIIDAVVA AYILNATLVI PKLDQNSYWK DISNFEEIFD VDWFISHLSK DVKIIKELPK
201: GEESRLIGLQ SIRVPRKCTP SCYLQRVLPL LKKKHVVQLS KFDYRLANQL DTELQKLRCR VNYHAVRYTQ TINKMGQILV DRMRTKAKHF VALHLRFEPD
301: MLAFSGCYYG GGQKERLELG AMRRRWKTLH AANPDKVREH GRCPLTPEEI GLMLRGLGFG REVHLYVASG EVYGGDATLA PLRALFPNLH TKETLTSKKE
401: LAPFARFSSR MAALDFIVCD ESDAFVTNNN GNMARILAGR SRRYMGHKVT IRPNAKKLHK IFTNRHNMTW DEFSTKVRKY QTGFMGEPDE MKAGEGEFHE
501: NPTSCICGKK KANEQLKEDE HDSWPWEYSD IGNVPMATRS GLDHQSEVDH QN
Best Arabidopsis Sequence Match ( AT4G38390.1 )
(BLAST)
001: MASLKLKKRD NGAEPDKKKL VIAGIRHQLL LLLRRRHRLF PLVSAVSGCL LLILFSFSTL SPPPLIHHNN QVAVEPNPTT PFRVPENGGR SDRQLWSSRL
101: SNLYYACSNA TDTFQVTDTR SQTNRYLLIA TSGGLNQQRT GIIDAVVAAY ILNATLVVPK LDQKSYWKDT SNFEDIFDVD WFISHLSKDV KIIKELPKEE
201: QSRISTSLQS MRVPRKCTPS CYLQRVLPIL TKKHVVQLSK FDYRLSNALD TELQKLRCRV NYHAVRYTES INRMGQLLVD RMRKKAKHFV ALHLRFEPDM
301: LAFSGCYYGG GQKERLELGA MRRRWKTLHA ANPEKVRRHG RCPLTPEEIG LMLRGLGFGK EVHLYVASGE VYGGEDTLAP LRALFPNLHT KETLTSKKEL
401: APFANFSSRM AALDFIVCDK SDAFVTNNNG NMARILAGRR RYLGHKVTIR PNAKKLYEIF KNRHNMTWGE FSSKVRRYQT GFMGEPDEMK PGEGEFHENP
501: ASCICRTSEA RVKEKAKHVN EDDSSEYSEI GNVPISSRSD LDHSQFDEVI F
Arabidopsis Description
RHS17RHS17 [Source:UniProtKB/TrEMBL;Acc:A0A178V2M6]
SUBAcon: [endoplasmic reticulum,nucleus,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.