Factsheet for Zm00001d021448_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU89872	Sorghum	endoplasmic reticulum, golgi, plasma membrane	93.77	93.61
HORVU5Hr1G086560.1	Barley	golgi	73.91	75.82
TraesCS5D01G353700.1	Wheat	golgi	73.57	75.34
TraesCS5B01G348700.1	Wheat	golgi	73.23	75.0
TraesCS5A01G347600.2	Wheat	golgi	73.74	74.74
Zm00001d050483_P002	Maize	golgi	68.35	70.12
GSMUA_Achr3P14740_001	Banana	mitochondrion	55.05	62.64
CDY69289	Canola	cytosol	39.9	59.85
KRH60950	Soybean	endoplasmic reticulum	57.41	59.51
KRH51625	Soybean	golgi, mitochondrion, vacuole	56.9	58.78
AT1G20550.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	55.22	58.16
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	55.56	57.59
VIT_03s0038g03240.t01	Wine grape	mitochondrion	56.9	57.09
AT1G76270.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	54.71	56.82
CDY29524	Canola	extracellular, golgi, plasma membrane	53.7	56.56
Zm00001d002668_P004	Maize	golgi	55.39	56.53
Bra025826.1-P	Field mustard	extracellular, golgi, plasma membrane	53.7	56.46
PGSC0003DMT400048017	Potato	golgi	51.68	56.33
Solyc01g112070.2.1	Tomato	nucleus	51.35	56.27
CDX87622	Canola	nucleus	53.2	56.23
Bra015771.1-P	Field mustard	golgi	54.88	56.11
CDX73250	Canola	golgi	54.88	56.11
CDY31477	Canola	extracellular, golgi, plasma membrane	52.86	55.67
KRH74090	Soybean	endoplasmic reticulum, golgi, plasma membrane	52.19	55.56
Solyc12g098400.1.1	Tomato	unclear	49.83	55.43
PGSC0003DMT400075381	Potato	golgi	55.05	55.14
KRH14026	Soybean	golgi	52.53	55.03
Solyc12g094590.1.1	Tomato	unclear	54.71	54.81
PGSC0003DMT400011606	Potato	golgi	49.16	54.78
AT4G38390.1	Thale cress	endoplasmic reticulum, nucleus, plasma membrane	50.67	54.63
CDY54803	Canola	golgi	49.83	53.62
Bra033562.1-P	Field mustard	golgi	49.66	53.54
CDY64279	Canola	golgi	49.66	53.44
Zm00001d002742_P002	Maize	endoplasmic reticulum, peroxisome, plasma membrane, plastid	42.76	50.7
PGSC0003DMT400043331	Potato	extracellular	46.13	50.55
Solyc10g074490.1.1	Tomato	golgi	50.17	46.2
Zm00001d039702_P001	Maize	plastid	30.13	38.0
Zm00001d048323_P001	Maize	endoplasmic reticulum, golgi, vacuole	29.29	37.99
Zm00001d029008_P001	Maize	mitochondrion	30.98	36.87
Zm00001d008692_P001	Maize	mitochondrion	29.97	35.53
Zm00001d037367_P001	Maize	plastid	29.8	35.4
Zm00001d041823_P003	Maize	mitochondrion, vacuole	29.12	35.38
Zm00001d045763_P002	Maize	golgi, plastid	29.46	35.07
Zm00001d037199_P001	Maize	mitochondrion	30.98	34.39
Zm00001d017906_P003	Maize	plastid	28.79	34.0
Zm00001d027842_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	28.96	31.68
Zm00001d010112_P001	Maize	cytosol, plastid	28.45	29.24
Zm00001d012362_P001	Maize	plastid	26.43	28.81
Zm00001d038263_P001	Maize	plastid	27.61	28.62
Zm00001d020643_P002	Maize	plasma membrane, plastid	25.76	19.9
Zm00001d036036_P001	Maize	plastid	4.21	18.38
Zm00001d045475_P001	Maize	nucleus, plastid	4.21	18.38
Zm00001d029394_P003	Maize	nucleus, plastid	4.21	18.38
Zm00001d016908_P006	Maize	nucleus, plastid	4.21	18.38
Zm00001d003493_P001	Maize	nucleus, plastid	4.04	17.65

Protein Annotations

EntrezGene:103633152	MapMan:35.1	UniProt:A0A1D6IB51	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	ProteinID:ONM57185.1	PFAM:PF10250
PANTHER:PTHR31818	PANTHER:PTHR31818:SF2	TMHMM:TMhelix	UniParc:UPI00083E71A3	EnsemblPlantsGene:Zm00001d021448	EnsemblPlants:Zm00001d021448_P002
EnsemblPlants:Zm00001d021448_T002	SEG:seg	:	:	:	:

Description

root hair specific 17

Coordinates

chr7:-:152385950..152390797

Molecular Weight (calculated)

66602.4 Da

IEP (calculated)

9.104

GRAVY (calculated)

-0.522

Length

594 amino acids

Sequence
(BLAST)

001: MGQPRRRGYP HGRHHRCPRG IALPAAGAGL LFLSVSLLSV SLLSAPPLAD PRPGLGTSSS SRRFLRRHPT NGSDGELEGS ESGDAFSVPA RGGWTGQDDL
101: WGSKLASNFH GCSNSSSRFL DSGITTQPDR YLIVVTSGGL NQQRTGIVDA VVAARILNAT LVVPKLDQTS FWKDSSNFSE IFDMDWFISF LAKDVRIIKE
201: PPEKGGKAMK PYKMRVPRKC TPRCYLNRVL PALLKKHVIR MTKYDYRLSN KLDTDLQKLR CRVNYHSLRF TDPIQELAEK LIQRMREKNR YFIALHLRFE
301: PDMLAFSGCY YGGGEKERRE LAAIRRRWRT LHIRDPEKGR RQGRCPLTPE EVGLMLRALG YRSDVHIYVA SGEIYGGEDT LASLKALFPN FHTKETLSSQ
401: EELAPFLKFS SRMAAIDFIV CEESDAFVAN NIGNMAKILA GQRRYFGHKR TIRPNAKQLY PLFMKRGNMS WDAFASQVRT IQKGYMGEPM EITPGRGEFH
501: ANPAACICEK TSRNSAIVKS ISGNNLEPVT DSGIRKTIGI SRPPYPVYTD EEADGSDTEE DPDSSGRGEV IDTEPDDDSA VRQEDPELEE ILSD

Best Arabidopsis Sequence Match ( AT1G20550.1 )
(BLAST)

001: MAFQRRRNNY YNRLRRLLPF ICAVSGALLI LFALLSILSP PPDDSDRRIS KHINYGANDE KKNTPVVFTV PRGGGRSDRD IWRSWNAEFF YGCCNASSKF
101: PNAKAITRND RYLAIATSGG LNQQRTGIVD AVVAARILNA TLVIPKLDQK SYWKDASDFS NIFDVDWFMS FLSKDVKIIE KLPQKGGQTW SPRRMRVPRK
201: CNEKCYINRV LPVLQKRHAV QLNKFDYRLS NKLRDDLQKL RCRVNYHALK FTDPILEMGN ELVRRMRKRS KHFIALHLRF EPDMLAFSGC YYGGGEKEKK
301: ELGTIRRRWK TLHVNNPEKQ RRQGRCPLTP EEVGLMLRAL GYGSDVHIYV ASGEVYGGEK SLAPLKALFP HFYSKDTIAT KMELKPFSSY SSRMAALDFL
401: VCDESDVFVT NNNGNMARIL AGRRRYFGHK PTIRPNAKKL YKLFMSKENT TWEEFASRVR TFQKGFMGEP KEVRAGKGEF HENPAACICE DTDAKVKAGK
501: MDSRKFGKKE QKEDEDAELS SSETDYEEDQ TDLQDRGLYN GTRLDYDDAL SVSEEPELEE MLSD

Arabidopsis Description

OFUT6O-fucosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HSU3]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.