Factsheet for Zm00001d003493_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

plastid 2
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016908_P006	Maize	nucleus, plastid	99.26	99.26
Zm00001d045475_P001	Maize	nucleus, plastid	99.26	99.26
Zm00001d029394_P003	Maize	nucleus, plastid	99.26	99.26
Zm00001d036036_P001	Maize	plastid	99.26	99.26
Zm00001d041823_P003	Maize	mitochondrion, vacuole	27.94	7.77
Zm00001d039702_P001	Maize	plastid	25.0	7.22
Zm00001d048323_P001	Maize	endoplasmic reticulum, golgi, vacuole	24.26	7.21
Zm00001d017906_P003	Maize	plastid	25.74	6.96
Zm00001d045763_P002	Maize	golgi, plastid	25.0	6.81
Zm00001d029008_P001	Maize	mitochondrion	25.0	6.81
Zm00001d037367_P001	Maize	plastid	25.0	6.8
Zm00001d008692_P001	Maize	mitochondrion	25.0	6.79
Zm00001d037199_P001	Maize	mitochondrion	25.74	6.54
Zm00001d027842_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	24.26	6.08
Zm00001d012362_P001	Maize	plastid	24.26	6.06
Zm00001d002742_P002	Maize	endoplasmic reticulum, peroxisome, plasma membrane, plastid	20.59	5.59
Zm00001d010112_P001	Maize	cytosol, plastid	22.06	5.19
Zm00001d050483_P002	Maize	golgi	21.32	5.01
Zm00001d002668_P004	Maize	golgi	21.32	4.98
Zm00001d038263_P001	Maize	plastid	20.59	4.89
Zm00001d021448_P002	Maize	mitochondrion	17.65	4.04
Zm00001d020643_P002	Maize	plasma membrane, plastid	18.38	3.25

Protein Annotations

Gene3D:1.10.20.10	EntrezGene:100381287	MapMan:12.1.4	UniProt:B6SRG7	EMBL:EU955332	EMBL:EU959087
GO:GO:0000786	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0005737
GO:GO:0005840	GO:GO:0046982	InterPro:Histone-fold	InterPro:Histone_H2A/H2B/H3	InterPro:Histone_H3/CENP-A	InterPro:IPR009072
ProteinID:ONM17035.1	ProteinID:ONM17036.1	PFAM:PF00125	PRINTS:PR00622	ScanProsite:PS00322	ScanProsite:PS00959
PANTHER:PTHR11426	PANTHER:PTHR11426:SF163	SMART:SM00428	SUPFAM:SSF47113	UniParc:UPI000182B1EE	EnsemblPlantsGene:Zm00001d003493
EnsemblPlants:Zm00001d003493_P001	EnsemblPlants:Zm00001d003493_T001	:	:	:	:

Description

ribosomal protein L32 homolog32

Coordinates

chr2:-:46024387..46026495

Molecular Weight (calculated)

15393.0 Da

IEP (calculated)

11.739

GRAVY (calculated)

-0.602

Length

136 amino acids

Sequence
(BLAST)

001: MARTKQTARK STGGKAPRKQ LATKAARKSA PTTGGVKKPH RYRPGTVALR EIRKYQKSTD LLIRKLPFQR LVREIAQDFK TDLRFQSHAV LALQEAAEAY
101: LVGLFEDTNL CAIHAKRVTI MPKDIQLARR IRGERA

Best Arabidopsis Sequence Match ( AT4G40030.3 )
(BLAST)

001: MARTKQTARK STGGKAPRKQ LATKAARKSA PTTGGVKKPH RYRPGTVALR EIRKYQKSTE LLIRKLPFQR LVREIAQDFK TDLRFQSHAV LALQEAAEAY
101: LVGLFEDTNL CAIHAKRVTI MPKDIQLARR IRGERA

Arabidopsis Description

Histone superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MRL0]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.