Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15207 | Sorghum | golgi | 94.3 | 94.3 |
| Os08t0554050-01 | Rice | golgi | 81.0 | 78.56 |
| TraesCS7A01G276200.2 | Wheat | golgi | 78.93 | 75.91 |
| TraesCS7D01G276100.1 | Wheat | golgi | 78.24 | 75.5 |
| TraesCS7B01G174000.1 | Wheat | golgi | 78.76 | 75.5 |
| HORVU7Hr1G058080.1 | Barley | plastid | 78.41 | 69.95 |
| Zm00001d021448_P002 | Maize | mitochondrion | 70.12 | 68.35 |
| GSMUA_Achr3P14740_001 | Banana | mitochondrion | 58.2 | 64.56 |
| CDY69289 | Canola | cytosol | 41.8 | 61.11 |
| KRH60950 | Soybean | endoplasmic reticulum | 60.45 | 61.08 |
| KRH51625 | Soybean | golgi, mitochondrion, vacuole | 60.28 | 60.7 |
| VIT_18s0001g00100.t01 | Wine grape | endoplasmic reticulum, golgi, mitochondrion | 59.07 | 59.69 |
| AT1G76270.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 57.51 | 58.22 |
| PGSC0003DMT400075381 | Potato | golgi | 59.59 | 58.18 |
| AT1G20550.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 56.65 | 58.16 |
| Solyc12g094590.1.1 | Tomato | unclear | 59.41 | 58.01 |
| CDX73250 | Canola | golgi | 57.86 | 57.66 |
| CDX87622 | Canola | nucleus | 55.96 | 57.65 |
| CDY31477 | Canola | extracellular, golgi, plasma membrane | 56.13 | 57.62 |
| CDY29524 | Canola | extracellular, golgi, plasma membrane | 56.13 | 57.62 |
| VIT_03s0038g03240.t01 | Wine grape | mitochondrion | 58.89 | 57.6 |
| Bra025826.1-P | Field mustard | extracellular, golgi, plasma membrane | 56.13 | 57.52 |
| Solyc12g098400.1.1 | Tomato | unclear | 53.02 | 57.49 |
| Bra015771.1-P | Field mustard | golgi | 57.69 | 57.49 |
| PGSC0003DMT400011606 | Potato | golgi | 52.68 | 57.22 |
| Zm00001d002668_P004 | Maize | golgi | 57.17 | 56.87 |
| Solyc01g112070.2.1 | Tomato | nucleus | 52.85 | 56.46 |
| PGSC0003DMT400048017 | Potato | golgi | 52.68 | 55.96 |
| KRH74090 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 53.37 | 55.38 |
| KRH14026 | Soybean | golgi | 54.06 | 55.2 |
| AT4G38390.1 | Thale cress | endoplasmic reticulum, nucleus, plasma membrane | 52.5 | 55.17 |
| CDY64279 | Canola | golgi | 52.5 | 55.07 |
| CDY54803 | Canola | golgi | 52.16 | 54.71 |
| Bra033562.1-P | Field mustard | golgi | 51.99 | 54.63 |
| PGSC0003DMT400043331 | Potato | extracellular | 48.7 | 52.03 |
| Zm00001d002742_P002 | Maize | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 44.91 | 51.9 |
| Solyc10g074490.1.1 | Tomato | golgi | 52.85 | 47.44 |
| Zm00001d039702_P001 | Maize | plastid | 32.12 | 39.49 |
| Zm00001d048323_P001 | Maize | endoplasmic reticulum, golgi, vacuole | 30.74 | 38.86 |
| Zm00001d029008_P001 | Maize | mitochondrion | 32.3 | 37.47 |
| Zm00001d041823_P003 | Maize | mitochondrion, vacuole | 31.43 | 37.22 |
| Zm00001d008692_P001 | Maize | mitochondrion | 32.12 | 37.13 |
| Zm00001d037199_P001 | Maize | mitochondrion | 32.64 | 35.33 |
| Zm00001d037367_P001 | Maize | plastid | 30.4 | 35.2 |
| Zm00001d045763_P002 | Maize | golgi, plastid | 30.22 | 35.07 |
| Zm00001d017906_P003 | Maize | plastid | 29.53 | 34.0 |
| Zm00001d027842_P003 | Maize | endoplasmic reticulum, golgi, plasma membrane | 30.22 | 32.23 |
| Zm00001d010112_P001 | Maize | cytosol, plastid | 29.71 | 29.76 |
| Zm00001d038263_P001 | Maize | plastid | 29.19 | 29.49 |
| Zm00001d012362_P001 | Maize | plastid | 27.46 | 29.17 |
| Zm00001d016908_P006 | Maize | nucleus, plastid | 5.18 | 22.06 |
| Zm00001d045475_P001 | Maize | nucleus, plastid | 5.18 | 22.06 |
| Zm00001d036036_P001 | Maize | plastid | 5.18 | 22.06 |
| Zm00001d029394_P003 | Maize | nucleus, plastid | 5.18 | 22.06 |
| Zm00001d003493_P001 | Maize | nucleus, plastid | 5.01 | 21.32 |
| Zm00001d020643_P002 | Maize | plasma membrane, plastid | 25.91 | 19.51 |
Protein Annotations
| EnsemblPlants:Zm00001d050483_P002 | EnsemblPlants:Zm00001d050483_T002 | EnsemblPlantsGene:Zm00001d050483 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0006004 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | GO:GO:0016757 | InterPro:FucosylTrfase_pln |
| InterPro:GDP-Fuc_O-FucTrfase | PANTHER:PTHR31818 | PANTHER:PTHR31818:SF1 | PFAM:PF10250 | PIRSF:PIRSF009360 | ProteinID:AQK52580.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000842E9BE | UniProt:A0A1D6Q1T8 | MapMan:35.1 | : |
Description
Auxin-independent growth promoter
Coordinates
chr4:-:91998934..92018898
Molecular Weight (calculated)
65072.2 Da
IEP (calculated)
9.730
GRAVY (calculated)
-0.445
Length
579 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQSRRRSGN YRCPRRAALP AAALLLFLLA AVALLYVSPP PLADHPVLAS SRRRRSAHTL LNSSGAGSME EFERREISRA PTNGSAVRDD LWGSKLASKF
101: YGCSNSSSRF LDSNITTQPE RYLMIVTSGG LNQQRTGIID AVVAARILNA TLVVPKLDQA SFWKDSSNFS DIFYADWFIS SLSKDVKIVK ELPHIGGKLR
201: APHRMRVPRK CTERCYLNRV LPALLKKHVI RLTKFDYRLA NRLQTDLQKL RCRVNYHALR FTAPIQEMGE KLIQRMRERS MYFIALHLRF EPDMLAFSGC
301: YYGGGEKERR ELGAIRKSMR CSVFQPNPEK GRRQGRCPLT PEEVGLMLRA LGYRKDVHIY VASGEIYGGA RTLAPLKALF PNLHTKETIS SKEELAPFSK
401: YSSRMAALDF IVCDESDAFV ANNNGNMAKI LAGRRRYFGH KRTIRPNAKR LYPLFLNRGN MSWDAFSSKV HMVQKGFMGE PKELRPGRGE FHENPSTCIC
501: ERTDGKAVAR AKSQDDQVLN SVADQGKGIG EPAVPNHTDE EAGEPDDDED VPADKEVVDA EMVDDVLAGD PELEQILSD
101: YGCSNSSSRF LDSNITTQPE RYLMIVTSGG LNQQRTGIID AVVAARILNA TLVVPKLDQA SFWKDSSNFS DIFYADWFIS SLSKDVKIVK ELPHIGGKLR
201: APHRMRVPRK CTERCYLNRV LPALLKKHVI RLTKFDYRLA NRLQTDLQKL RCRVNYHALR FTAPIQEMGE KLIQRMRERS MYFIALHLRF EPDMLAFSGC
301: YYGGGEKERR ELGAIRKSMR CSVFQPNPEK GRRQGRCPLT PEEVGLMLRA LGYRKDVHIY VASGEIYGGA RTLAPLKALF PNLHTKETIS SKEELAPFSK
401: YSSRMAALDF IVCDESDAFV ANNNGNMAKI LAGRRRYFGH KRTIRPNAKR LYPLFLNRGN MSWDAFSSKV HMVQKGFMGE PKELRPGRGE FHENPSTCIC
501: ERTDGKAVAR AKSQDDQVLN SVADQGKGIG EPAVPNHTDE EAGEPDDDED VPADKEVVDA EMVDDVLAGD PELEQILSD
001: MASLKLKKRD NGAEPDKKKL VIAGIRHQLL LLLRRRHRLF PLVSAVSGCL LLILFSFSTL SPPPLIHHNN QVAVEPNPTT PFRVPENGGR SDRQLWSSRL
101: SNLYYACSNA TDTFQVTDTR SQTNRYLLIA TSGGLNQQRT GIIDAVVAAY ILNATLVVPK LDQKSYWKDT SNFEDIFDVD WFISHLSKDV KIIKELPKEE
201: QSRISTSLQS MRVPRKCTPS CYLQRVLPIL TKKHVVQLSK FDYRLSNALD TELQKLRCRV NYHAVRYTES INRMGQLLVD RMRKKAKHFV ALHLRFEPDM
301: LAFSGCYYGG GQKERLELGA MRRRWKTLHA ANPEKVRRHG RCPLTPEEIG LMLRGLGFGK EVHLYVASGE VYGGEDTLAP LRALFPNLHT KETLTSKKEL
401: APFANFSSRM AALDFIVCDK SDAFVTNNNG NMARILAGRR RYLGHKVTIR PNAKKLYEIF KNRHNMTWGE FSSKVRRYQT GFMGEPDEMK PGEGEFHENP
501: ASCICRTSEA RVKEKAKHVN EDDSSEYSEI GNVPISSRSD LDHSQFDEVI F
101: SNLYYACSNA TDTFQVTDTR SQTNRYLLIA TSGGLNQQRT GIIDAVVAAY ILNATLVVPK LDQKSYWKDT SNFEDIFDVD WFISHLSKDV KIIKELPKEE
201: QSRISTSLQS MRVPRKCTPS CYLQRVLPIL TKKHVVQLSK FDYRLSNALD TELQKLRCRV NYHAVRYTES INRMGQLLVD RMRKKAKHFV ALHLRFEPDM
301: LAFSGCYYGG GQKERLELGA MRRRWKTLHA ANPEKVRRHG RCPLTPEEIG LMLRGLGFGK EVHLYVASGE VYGGEDTLAP LRALFPNLHT KETLTSKKEL
401: APFANFSSRM AALDFIVCDK SDAFVTNNNG NMARILAGRR RYLGHKVTIR PNAKKLYEIF KNRHNMTWGE FSSKVRRYQT GFMGEPDEMK PGEGEFHENP
501: ASCICRTSEA RVKEKAKHVN EDDSSEYSEI GNVPISSRSD LDHSQFDEVI F
Arabidopsis Description
RHS17RHS17 [Source:UniProtKB/TrEMBL;Acc:A0A178V2M6]
SUBAcon: [endoplasmic reticulum,nucleus,plasma membrane]
SUBAcon: [endoplasmic reticulum,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.