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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • golgi 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g094590.1.1 Tomato unclear 95.78 95.78
PGSC0003DMT400011606 Potato golgi 64.76 72.05
CDY31477 Canola extracellular, golgi, plasma membrane 64.92 68.26
Bra015771.1-P Field mustard golgi 66.78 68.16
AT1G76270.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 65.6 68.01
Bra025826.1-P Field mustard extracellular, golgi, plasma membrane 64.59 67.79
CDY29524 Canola extracellular, golgi, plasma membrane 64.42 67.73
KRH60950 Soybean endoplasmic reticulum 65.43 67.71
CDX73250 Canola golgi 66.27 67.64
AT1G20550.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 64.08 67.38
VIT_18s0001g00100.t01 Wine grape endoplasmic reticulum, golgi, mitochondrion 64.92 67.19
KRH51625 Soybean golgi, mitochondrion, vacuole 64.92 66.96
CDX87622 Canola nucleus 63.41 66.9
GSMUA_Achr8P13270_001 Banana endoplasmic reticulum, golgi, plasma membrane 48.57 65.01
GSMUA_Achr3P14740_001 Banana mitochondrion 56.49 64.18
PGSC0003DMT400048017 Potato golgi 56.83 61.83
EES15207 Sorghum golgi 59.19 60.62
Os08t0554050-01 Rice golgi 60.54 60.13
Zm00001d050483_P002 Maize golgi 58.18 59.59
Os04t0563000-01 Rice endoplasmic reticulum, golgi 55.31 59.42
TraesCS7D01G276100.1 Wheat golgi 59.02 58.33
TraesCS7A01G276200.2 Wheat golgi 59.19 58.31
TraesCS7B01G174000.1 Wheat golgi 59.02 57.95
GSMUA_Achr5P19070_001 Banana endoplasmic reticulum, golgi, plasma membrane 59.19 57.73
HORVU5Hr1G086560.1 Barley golgi 56.32 57.69
TraesCS5B01G348700.1 Wheat golgi 56.16 57.41
KXG26900 Sorghum golgi 55.65 56.99
Zm00001d002668_P004 Maize golgi 55.82 56.87
TraesCS5D01G353700.1 Wheat golgi 55.48 56.72
TraesCS5A01G347600.2 Wheat golgi 55.99 56.66
TraesCS2D01G401900.1 Wheat golgi 54.47 56.37
TraesCS2B01G423100.1 Wheat golgi 53.79 55.77
PGSC0003DMT400043331 Potato extracellular 50.93 55.72
OQU89872 Sorghum endoplasmic reticulum, golgi, plasma membrane 55.48 55.29
Zm00001d021448_P002 Maize mitochondrion 55.14 55.05
HORVU2Hr1G096100.42 Barley mitochondrion, plastid 52.95 54.14
HORVU7Hr1G058080.1 Barley plastid 58.68 53.62
TraesCS2A01G405000.3 Wheat golgi 54.13 51.28
PGSC0003DMT400030987 Potato mitochondrion 46.37 50.93
PGSC0003DMT400012157 Potato golgi, plastid, vacuole 47.72 48.05
PGSC0003DMT400045812 Potato cytosol 25.13 44.48
PGSC0003DMT400072871 Potato cytosol, extracellular 28.16 42.93
PGSC0003DMT400010442 Potato golgi 30.52 36.64
PGSC0003DMT400006095 Potato cytosol 30.02 35.6
PGSC0003DMT400063300 Potato cytosol 29.85 35.47
PGSC0003DMT400079224 Potato endoplasmic reticulum, golgi, plasma membrane 31.2 34.84
PGSC0003DMT400036338 Potato cytosol, golgi, mitochondrion 26.81 29.72
PGSC0003DMT400028801 Potato plastid 29.85 27.61
PGSC0003DMT400052382 Potato plastid 29.51 27.26
PGSC0003DMT400041662 Potato nucleus, plastid 5.23 22.79
PGSC0003DMT400043254 Potato nucleus, plastid 5.23 22.79
PGSC0003DMT400009656 Potato nucleus, plastid 5.23 22.79
PGSC0003DMT400079216 Potato nucleus, plastid 5.23 22.79
Protein Annotations
EntrezGene:102579823MapMan:35.1InterPro:FucosylTrfase_plnInterPro:GDP-Fuc_O-FucTrfaseGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005975GO:GO:0006004GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016757UniProt:M1CV23PFAM:PF10250EnsemblPlantsGene:PGSC0003DMG400029317
PGSC:PGSC0003DMG400029317EnsemblPlants:PGSC0003DMT400075381PIRSF:PIRSF009360PANTHER:PTHR31818PANTHER:PTHR31818:SF1TMHMM:TMhelix
UniParc:UPI000294987ERefSeq:XP_006342543.1SEG:seg:::
Description
Auxin-independent growth promoter protein [Source:PGSC_GENE;Acc:PGSC0003DMG400029317]
Coordinates
chr12:-:57408975..57414915
Molecular Weight (calculated)
67619.2 Da
IEP (calculated)
8.456
GRAVY (calculated)
-0.637
Length
593 amino acids
Sequence
(BLAST)
001: MAIPRRRHQH HHSRVRFLFP AIFAVSAIIL FLFLFLSILA PSPNDDNHLR HLHRDDSSGG KGGGNEIKVP SSRVKISAGV HNRDLWSSKN SKFFYGCSNA
101: SSKFAKAKTI THPNRYLLIV TSGGLNQQRT GITDAVVAAR ILNATLVVPK LDKTSFWKDS SDFSDIFDVD WFIKHLTTDV TIIKDLPLRR GQIWTPHRMR
201: VPRKCSDRCY INRVLPVLMK RHAVQISKFD YRLANKLDTD LQKLRCRVNY HALKFADPIL KMGEKLVQRM RMSSKHYIAL HLRFEPDMLA FSGCYYGGGD
301: KERTELGKIR RRWKTLHNSN PEKARRQGRC PLTPEEVGLM LRALGYGEDV HIYVASGEVY GGEETLAPLK ALFPNFYSKD TIASKEELEP FSTYSSRMAA
401: LDFIVCDESD VFVTNNNGNM AKILAGRRRY FGHKPTIRPN AKKLNRVFLN RNNMTTEEFS SRVHTFQRGF MGDPKEVRPG RGEFHENPST CICEDAEAEK
501: KMDWDHRKSG KDNVAKKEDG DDRKKDIEAV AHDENVDYEP EMTDPEDEEE DEDNPLGEVS LGSSKSEAFS NGTSTDYDSS MSEDTELDEL LSD
Best Arabidopsis Sequence Match ( AT1G76270.1 )
(BLAST)
001: MNFHRRRYPY YNRLRRLLPL VIAVSLSLLI LFAFLSFLAP PPGDSDRLPP RVRYSSNDAI KATGFHIPRA GGRSDRDIWR SRNAEFFFGC SNASSKFANS
101: KAVTRNDRYL VIATSGGLNQ QRTGIVDAVV AARILNATLV VPKLDQKSYW KDASDFSHIF DVDWFISFLS GDVRIIKQLP LKGGRTWSTS RMRVPRKCNE
201: RCYINRVLPV LLKRHAVQLN KFDYRLSNKL SDDLQKLRCR VNYHALKFTD PILTMGNELV RRMRLRSKHF IALHLRYEPD MLAFSGCYYG GGDKERRELA
301: AIRRRWKTLH INNPEKQRRQ GRCPLTPEEV GLMLRALGYG SDVHIYVASG EVYGGEESLA PLKALFPHFY SKDTIATKEE LEPFSSYSSR MAALDFLVCD
401: ESDVFVTNNN GNMAKILAGR RRYLGHKPTV RPNAKKLYRL FMNKENTTWE EFSSKVRSFQ RGFMGEPKEV RAGRGEFHEN PSTCICEDTE AKAKAQLESR
501: KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS DLQDRGLYNG TSLDYDDPST SDEPELEAML SD
Arabidopsis Description
OFUT16O-fucosyltransferase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q949U4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.