Factsheet for PGSC0003DMT400030987

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
golgi 4
extracellular 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g060750.2.1	Tomato	mitochondrion	95.0	95.0
PGSC0003DMT400012157	Potato	golgi, plastid, vacuole	80.37	73.68
Bra012697.1-P	Field mustard	endoplasmic reticulum	66.11	70.41
VIT_00s0229g00100.t01	Wine grape	cytosol, golgi, plastid	73.15	69.06
AT4G16650.2	Thale cress	mitochondrion, plastid	68.89	67.76
CDY53645	Canola	mitochondrion	66.3	67.55
KRH77356	Soybean	plastid	68.52	67.4
CDY50845	Canola	cytosol, endoplasmic reticulum, golgi, plastid	66.3	67.29
KRH04145	Soybean	golgi, mitochondrion, plastid	68.15	67.15
Bra040745.1-P	Field mustard	mitochondrion	65.56	66.92
KRH28091	Soybean	plastid	68.33	66.73
CDY32271	Canola	plastid	67.78	66.55
Bra038495.1-P	Field mustard	plastid	67.78	66.55
CDY40517	Canola	mitochondrion	67.78	66.42
TraesCS2B01G432900.2	Wheat	plastid	62.22	66.4
TraesCS2D01G410600.1	Wheat	plastid	62.22	66.4
CDY60713	Canola	mitochondrion	67.96	66.37
CDX90501	Canola	mitochondrion	67.96	66.37
TraesCS2A01G414000.1	Wheat	plastid	61.85	66.01
HORVU2Hr1G097570.8	Barley	plastid	61.3	65.94
GSMUA_Achr7P07030_001	Banana	golgi	62.78	65.7
EES12618	Sorghum	plastid	60.0	64.8
Zm00001d002742_P002	Maize	endoplasmic reticulum, peroxisome, plasma membrane, plastid	59.63	64.27
GSMUA_Achr1P04270_001	Banana	plastid	64.44	64.21
Os04t0551300-01	Rice	cytosol, golgi, mitochondrion, plastid	36.85	63.99
KRH57421	Soybean	mitochondrion, plasma membrane, plastid, vacuole	67.96	59.97
PGSC0003DMT400011606	Potato	golgi	47.96	48.59
PGSC0003DMT400048017	Potato	golgi	47.59	47.16
PGSC0003DMT400075381	Potato	golgi	50.93	46.37
PGSC0003DMT400043331	Potato	extracellular	44.63	44.46
PGSC0003DMT400045812	Potato	cytosol	25.56	41.19
PGSC0003DMT400072871	Potato	cytosol, extracellular	28.7	39.85
PGSC0003DMT400010442	Potato	golgi	32.22	35.22
PGSC0003DMT400006095	Potato	cytosol	31.67	34.2
PGSC0003DMT400063300	Potato	cytosol	31.48	34.07
PGSC0003DMT400079224	Potato	endoplasmic reticulum, golgi, plasma membrane	32.41	32.96
PGSC0003DMT400036338	Potato	cytosol, golgi, mitochondrion	29.07	29.35
PGSC0003DMT400028801	Potato	plastid	32.22	27.15
PGSC0003DMT400052382	Potato	plastid	32.04	26.95
PGSC0003DMT400043254	Potato	nucleus, plastid	5.56	22.06
PGSC0003DMT400079216	Potato	nucleus, plastid	5.56	22.06
PGSC0003DMT400009656	Potato	nucleus, plastid	5.56	22.06
PGSC0003DMT400041662	Potato	nucleus, plastid	5.56	22.06

Protein Annotations

MapMan:35.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	UniProt:M1AV18	PFAM:PF10250	EnsemblPlantsGene:PGSC0003DMG400011874	PGSC:PGSC0003DMG400011874
EnsemblPlants:PGSC0003DMT400030987	PIRSF:PIRSF009360	PANTHER:PTHR31818	PANTHER:PTHR31818:SF3	TMHMM:TMhelix	UniParc:UPI00029656A7

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400011874]

Coordinates

chr6:+:43926778..43936749

Molecular Weight (calculated)

62441.3 Da

IEP (calculated)

9.752

GRAVY (calculated)

-0.373

Length

540 amino acids

Sequence
(BLAST)

001: MGVAKVWRYS CGVLANTQKQ HFFFSCWLWR RPISCTKVCG FMLFALGLIS LFTGYVASNL ELYSQRLAKG AWFYKQDGDA PIDIWKSRYS TSYYGCSERG
101: PRFASAVNVR SSNGYLLIAT SGGLNQQRTG ITDAVVVARI LNATLVVPEL DHHSFWKDDS DFFDIFDVKW FISYLAKDVT VVKRVPEKVM RLMGKPPYTM
201: RVPRKSEPEY YLDQVLPVLL KRRVLQLTKF DFRVANDLDE ELQKLRCRVN YHALRFTKPI RNFGQKLVVR MRKMARRFVA VHLRFEPDML AFSGCYYGGG
301: DKERYELAEI RKRWATLPEL IPDEERTRGR CPLTPHEVGL MLRALGFKNE TYLYVASGEV YGGEKTLQPL KELFPNFYTK EIVAGDELKP FLPYSSNLAA
401: IDYVVCDESD VFVTNNNGNM AKILAGSRRY MGHKRTIRPN AKRLSALFQA RNKMDWDTFS RKVKSCQSGF MGDPEEVRLG RGEFHEYPSS CICKTPFNHS
501: NFIEKYNNHT PSANPSLLDS RYRYIRNSSD LDDKILQKLY

Best Arabidopsis Sequence Match ( AT4G16650.1 )
(BLAST)

001: MGVVAEVWRS SVRLLTNSPQ LNGGSHKSAL WKWRFFSAQP KRTVMWTWVC GFMLFSLGVI SLFTGHVVSH LEWYSQQLSK RSLLDMSRRE PIDVWKSKYS
101: KFFYGCSERG RNFLPAVQEQ SSNGYLLIAA SGGLNQQRTG ITDAVVVARI LNATLVVPEL DHHSYWKDDS DFSDIFDVNW FISSLAKDVT IVKRVPDRVM
201: RAMEKPPYTT RVPRKSTLEY YLDQVLPILT RRHVLQLTKF DYRLANDLDE DMQKLRCRVN YHALRFTKRI QSVGMKVVKR MRKMAKRFIA VHLRFEPDML
301: AFSGCDFGGG EKERAELAEI RKRWDTLPDL DPLEERKRGK CPLTPHEVGL MLRALGFTND TYIYVASGEI YGGEKTLKPL RELFPNFYTK EMLANDELKP
401: LLPYSSRLAA IDYIVSDESD VFITNNNGNM AKILAGRRRY MGHKRTIRPN AKKLSALFMD REKMEWQTFA KKVKSCQRGF MGDPDEFKPG RGEFHEYPQS
501: CICQRPFSYD KTSTDDEEED MSEENHNSTS PGHVHLSSAD NERDEVFPD

Arabidopsis Description

OFUT29O-fucosyltransferase 29 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF8]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.