CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
golgi 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002742_P002	Maize	endoplasmic reticulum, peroxisome, plasma membrane, plastid	94.6	94.41
Os04t0551300-01	Rice	cytosol, golgi, mitochondrion, plastid	53.6	86.17
TraesCS2B01G432900.2	Wheat	plastid	84.4	83.4
TraesCS2D01G410600.1	Wheat	plastid	84.2	83.2
TraesCS2A01G414000.1	Wheat	plastid	84.2	83.2
HORVU2Hr1G097570.8	Barley	plastid	82.6	82.27
GSMUA_Achr7P07030_001	Banana	golgi	66.0	63.95
Bra012697.1-P	Field mustard	endoplasmic reticulum	63.4	62.52
GSMUA_Achr1P04270_001	Banana	plastid	66.8	61.62
Solyc06g060750.2.1	Tomato	mitochondrion	65.2	60.37
CDY53645	Canola	mitochondrion	63.8	60.19
PGSC0003DMT400030987	Potato	mitochondrion	64.8	60.0
Bra040745.1-P	Field mustard	mitochondrion	63.4	59.92
CDY50845	Canola	cytosol, endoplasmic reticulum, golgi, plastid	63.6	59.77
KRH77356	Soybean	plastid	65.4	59.56
KRH28091	Soybean	plastid	65.2	58.95
AT4G16650.2	Thale cress	mitochondrion, plastid	64.4	58.65
KRH04145	Soybean	golgi, mitochondrion, plastid	64.2	58.58
Bra038495.1-P	Field mustard	plastid	64.2	58.36
CDY32271	Canola	plastid	64.2	58.36
CDY40517	Canola	mitochondrion	64.2	58.26
CDX90501	Canola	mitochondrion	64.2	58.05
Solyc08g078540.2.1	Tomato	mitochondrion, plastid	68.4	57.77
VIT_00s0229g00100.t01	Wine grape	cytosol, golgi, plastid	66.0	57.69
PGSC0003DMT400012157	Potato	golgi, plastid, vacuole	67.8	57.56
CDY60713	Canola	mitochondrion	63.6	57.5
KRH57421	Soybean	mitochondrion, plasma membrane, plastid, vacuole	65.2	53.27
KXG26900	Sorghum	golgi	53.2	45.94
EES15207	Sorghum	golgi	52.4	45.25
OQU89872	Sorghum	endoplasmic reticulum, golgi, plasma membrane	51.6	43.36
EER92792	Sorghum	endoplasmic reticulum, golgi	35.2	38.43
KXG31767	Sorghum	mitochondrion	35.6	36.11
EER92325	Sorghum	mitochondrion	35.4	35.4
OQU85485	Sorghum	mitochondrion	34.0	34.07
EES15789	Sorghum	mitochondrion	33.2	33.88
OQU87869	Sorghum	mitochondrion	31.6	33.69
EER89610	Sorghum	plastid	34.2	33.33
EER99050	Sorghum	golgi, mitochondrion, plastid	33.0	33.13
OQU76069	Sorghum	mitochondrion	35.6	33.09
KXG22127	Sorghum	plastid	34.4	28.15
EER96805	Sorghum	plastid	33.6	25.93
KXG26432	Sorghum	nucleus, plastid	5.8	21.32

Protein Annotations

MapMan:35.1	EntrezGene:8083369	UniProt:C5YDH7	EnsemblPlants:EES12618	ProteinID:EES12618	ProteinID:EES12618.1
InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975
GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31818	PANTHER:PTHR31818:SF3	EnsemblPlantsGene:SORBI_3006G170900
TMHMM:TMhelix	UniParc:UPI0001A8758E	RefSeq:XP_002448290.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:52736229..52740279

Molecular Weight (calculated)

57016.4 Da

IEP (calculated)

9.380

GRAVY (calculated)

-0.398

Length

500 amino acids

Sequence
(BLAST)

001: MGRKPDAAAK SYYSGGGGAG ASSPRAARKA PPSPVFLGTA LFVLGFVSLF TGHVVTDADW ARIRSRWRSK QHRNYEPIDI WESKYSSMYY GCSGRSADFR
101: SAVPENSSTG YLLIATSGGL NQQRIGITDA VVVAWILNAT LVVPELDHHS FWKDDSDFSD IFDVDWFISY LSKDVSIVKR IPYEVMMSMD KLPWTMRAPR
201: KSMPEFYIDE VLPILMRRRA LQLTKFDYRL SSDLDEDLQK LRCRVNFHAL KFTSSIHAMG QKLVQKLRLM NTRYVAIHLR FEPDMLAFSG CYYGGGEKER
301: KELGEIRKRW DTLPELSAEE ERSRGKCPLT PHEVGLMLRA LGFDNDTLLY VASGEIYGGD ETLQPLRELF PNFYTKEKLA GDDLNPFLPF SSRLAAIDFI
401: VCDESDVFVT NNNGNMAKVL AGRRRYMGHK RTIRPNAKKL NVLFQTRNQL GWDTFSRKVQ KVQRGLMGEP DDIRPKQDDF HEFPSSCICL RKPRNISVTT

Best Arabidopsis Sequence Match ( AT4G16650.1 )
(BLAST)

001: MGVVAEVWRS SVRLLTNSPQ LNGGSHKSAL WKWRFFSAQP KRTVMWTWVC GFMLFSLGVI SLFTGHVVSH LEWYSQQLSK RSLLDMSRRE PIDVWKSKYS
101: KFFYGCSERG RNFLPAVQEQ SSNGYLLIAA SGGLNQQRTG ITDAVVVARI LNATLVVPEL DHHSYWKDDS DFSDIFDVNW FISSLAKDVT IVKRVPDRVM
201: RAMEKPPYTT RVPRKSTLEY YLDQVLPILT RRHVLQLTKF DYRLANDLDE DMQKLRCRVN YHALRFTKRI QSVGMKVVKR MRKMAKRFIA VHLRFEPDML
301: AFSGCDFGGG EKERAELAEI RKRWDTLPDL DPLEERKRGK CPLTPHEVGL MLRALGFTND TYIYVASGEI YGGEKTLKPL RELFPNFYTK EMLANDELKP
401: LLPYSSRLAA IDYIVSDESD VFITNNNGNM AKILAGRRRY MGHKRTIRPN AKKLSALFMD REKMEWQTFA KKVKSCQRGF MGDPDEFKPG RGEFHEYPQS
501: CICQRPFSYD KTSTDDEEED MSEENHNSTS PGHVHLSSAD NERDEVFPD

Arabidopsis Description

OFUT29O-fucosyltransferase 29 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF8]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.