CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
endoplasmic reticulum 1
plastid 1
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53645	Canola	mitochondrion	96.99	97.36
Bra040745.1-P	Field mustard	mitochondrion	96.43	96.98
CDY40517	Canola	mitochondrion	93.05	89.84
CDY32271	Canola	plastid	92.86	89.82
CDX90501	Canola	mitochondrion	93.05	89.51
AT4G16650.2	Thale cress	mitochondrion, plastid	92.29	89.44
CDY60713	Canola	mitochondrion	90.98	87.52
VIT_00s0229g00100.t01	Wine grape	cytosol, golgi, plastid	72.56	67.48
KRH04145	Soybean	golgi, mitochondrion, plastid	69.36	67.34
KRH77356	Soybean	plastid	68.61	66.48
PGSC0003DMT400030987	Potato	mitochondrion	67.29	66.3
KRH28091	Soybean	plastid	68.8	66.18
Solyc06g060750.2.1	Tomato	mitochondrion	66.73	65.74
GSMUA_Achr7P07030_001	Banana	golgi	62.78	64.73
TraesCS2B01G432900.2	Wheat	plastid	60.9	64.03
TraesCS2D01G410600.1	Wheat	plastid	60.9	64.03
HORVU2Hr1G097570.8	Barley	plastid	60.15	63.74
EES12618	Sorghum	plastid	59.77	63.6
Zm00001d002742_P002	Maize	endoplasmic reticulum, peroxisome, plasma membrane, plastid	59.77	63.47
TraesCS2A01G414000.1	Wheat	plastid	60.34	63.44
Solyc08g078540.2.1	Tomato	mitochondrion, plastid	69.92	62.84
PGSC0003DMT400012157	Potato	golgi, plastid, vacuole	69.36	62.65
Os04t0551300-01	Rice	cytosol, golgi, mitochondrion, plastid	36.47	62.38
GSMUA_Achr1P04270_001	Banana	plastid	63.35	62.18
KRH57421	Soybean	mitochondrion, plasma membrane, plastid, vacuole	69.17	60.13
CDY69289	Canola	cytosol	39.85	53.54
CDX87622	Canola	nucleus	49.81	47.15
CDY54803	Canola	golgi	48.68	46.92
CDY64279	Canola	golgi	48.5	46.74
CDY29524	Canola	extracellular, golgi, plasma membrane	49.25	46.45
CDY31477	Canola	extracellular, golgi, plasma membrane	49.25	46.45
CDX73250	Canola	golgi	50.19	45.96
CDY04145	Canola	cytosol	28.76	41.69
CDY60465	Canola	mitochondrion	34.4	40.67
CDY43245	Canola	cytosol	34.21	40.44
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	34.4	38.45
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	35.9	38.35
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	35.71	38.08
CDY24821	Canola	cytosol, endoplasmic reticulum, golgi	35.34	36.5
CDX74265	Canola	cytosol, endoplasmic reticulum, golgi	35.15	36.38
CDX91985	Canola	golgi	35.15	36.38
CDY34715	Canola	cytosol, endoplasmic reticulum, golgi	26.5	36.34
CDY26456	Canola	golgi	34.4	36.02
CDX69504	Canola	golgi	34.4	35.95
CDX78650	Canola	golgi	34.21	35.83
CDX70647	Canola	golgi	34.02	35.7
CDX70637	Canola	golgi	34.21	35.69
CDY18704	Canola	mitochondrion	34.02	35.42
CDX81230	Canola	mitochondrion	33.27	34.77
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	29.7	34.27
CDY34713	Canola	cytosol	29.7	33.91
CDY04814	Canola	golgi	34.21	32.73
CDY33687	Canola	nucleus, plastid	34.4	28.46
CDX74650	Canola	nucleus, plastid	34.02	28.33
CDX73509	Canola	plastid	33.65	27.8
CDX78207	Canola	plastid	33.46	27.6
CDY40321	Canola	plastid	31.58	25.77
CDY55908	Canola	plastid	30.64	25.55
CDY10480	Canola	plastid	31.39	25.5
CDY18412	Canola	plastid	34.02	25.14
CDX93336	Canola	plastid	33.83	24.76
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	26.88	24.49
CDY14499	Canola	plastid	32.89	24.37
CDY07758	Canola	plastid	32.89	24.37
CDX70375	Canola	nucleus, plastid	4.7	18.38
CDX69362	Canola	nucleus, plastid	4.7	18.38
CDX68121	Canola	nucleus, plastid	4.7	18.38
CDY13557	Canola	nucleus, plastid	4.7	18.38
CDX78406	Canola	nucleus, plastid	4.7	18.38
CDY69490	Canola	nucleus, plastid	4.7	18.38
CDY68289	Canola	nucleus, plastid	4.7	18.38
CDX85906	Canola	nucleus, plastid	4.7	18.38
CDY39044	Canola	nucleus, plastid	4.7	18.38
CDX85735	Canola	nucleus, plastid	4.7	18.38

Protein Annotations

KEGG:00052+2.4.1.22	KEGG:00514+2.4.1.221	MapMan:35.1	GO:A0A078III3	UniProt:A0A078III3	EnsemblPlants:CDY50845
ProteinID:CDY50845	ProteinID:CDY50845.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSBRNA2T00097585001	PFAM:PF10250	PIRSF:PIRSF009360
PANTHER:PTHR31818	PANTHER:PTHR31818:SF3	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EF14D5	SEG:seg

Description

BnaC08g47910DBnaC08g47910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078III3]

Coordinates

chrLK032944:-:20050..23444

Molecular Weight (calculated)

61264.5 Da

IEP (calculated)

9.465

GRAVY (calculated)

-0.536

Length

532 amino acids

Sequence
(BLAST)

001: MGVGVAQLNK SGGLWKWRSF SGQPKRTVMW KWVCGFMLFS LGVISLFTGH VVSHLEWAQQ LSKRSLLDMS RKEPIDVWKS KYSNFFYGCT ERGNSFPPAV
101: QEHKSNGYLL IAASGGLNQQ RTGITDAVVV ARILNATLVV PELDHHSYWK DDSDFNDIFD VNWFISSLTN DVTIVKRVPD RVMRSMEKPP YTMRVPRKST
201: PEYYLDQVLP ILSRRHVLQL TKFDYRLAND LDEDMQKLRC RVNYNALRFT KRIQSVGMKV VKRMRKMAKR FIAVHLRFEP DMLAFSGCDF GGGEKERAEL
301: AEIRKRWDTL PDLDPLEERK RGKCPLTPHE VGLMLRALGF ANNTYIYVAS GEIYGGEKTL RPLRELFPNF YTKEMLASDE LKPMLPFSSR LAAIDYTVSD
401: ESDVFITNNN GNMAKILAGR RRYMGHKRTI RPNAKKLSAL FMDREKMEWQ TFAKKVKSCQ RGFMGDPDEF KPGRGEFHEY PQACICQRPF SYDKTSTDDE
501: EKDIPGEFHN STSSGHGHLS SADNERDEVF PD

Best Arabidopsis Sequence Match ( AT4G16650.1 )
(BLAST)

001: MGVVAEVWRS SVRLLTNSPQ LNGGSHKSAL WKWRFFSAQP KRTVMWTWVC GFMLFSLGVI SLFTGHVVSH LEWYSQQLSK RSLLDMSRRE PIDVWKSKYS
101: KFFYGCSERG RNFLPAVQEQ SSNGYLLIAA SGGLNQQRTG ITDAVVVARI LNATLVVPEL DHHSYWKDDS DFSDIFDVNW FISSLAKDVT IVKRVPDRVM
201: RAMEKPPYTT RVPRKSTLEY YLDQVLPILT RRHVLQLTKF DYRLANDLDE DMQKLRCRVN YHALRFTKRI QSVGMKVVKR MRKMAKRFIA VHLRFEPDML
301: AFSGCDFGGG EKERAELAEI RKRWDTLPDL DPLEERKRGK CPLTPHEVGL MLRALGFTND TYIYVASGEI YGGEKTLKPL RELFPNFYTK EMLANDELKP
401: LLPYSSRLAA IDYIVSDESD VFITNNNGNM AKILAGRRRY MGHKRTIRPN AKKLSALFMD REKMEWQTFA KKVKSCQRGF MGDPDEFKPG RGEFHEYPQS
501: CICQRPFSYD KTSTDDEEED MSEENHNSTS PGHVHLSSAD NERDEVFPD

Arabidopsis Description

OFUT29O-fucosyltransferase 29 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.