CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29524	Canola	extracellular, golgi, plasma membrane	97.34	97.34
AT1G20550.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	89.01	89.01
CDX73250	Canola	golgi	83.33	80.89
CDX87622	Canola	nucleus	79.26	79.54
KRH60950	Soybean	endoplasmic reticulum	69.68	68.59
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	69.5	68.41
KRH51625	Soybean	golgi, mitochondrion, vacuole	68.62	67.3
PGSC0003DMT400075381	Potato	golgi	68.26	64.92
Solyc12g094590.1.1	Tomato	unclear	67.55	64.25
GSMUA_Achr3P14740_001	Banana	mitochondrion	59.04	63.79
GSMUA_Achr8P13270_001	Banana	endoplasmic reticulum, golgi, plasma membrane	49.65	63.21
CDY69289	Canola	cytosol	43.79	62.37
Solyc12g098400.1.1	Tomato	unclear	57.09	60.3
Os04t0563000-01	Rice	endoplasmic reticulum, golgi	58.69	59.96
PGSC0003DMT400011606	Potato	golgi	56.38	59.66
KXG26900	Sorghum	golgi	60.11	58.55
Zm00001d002668_P004	Maize	golgi	60.28	58.42
TraesCS2B01G423100.1	Wheat	golgi	58.33	57.52
TraesCS2D01G401900.1	Wheat	golgi	58.33	57.42
GSMUA_Achr5P19070_001	Banana	endoplasmic reticulum, golgi, plasma membrane	61.88	57.4
EES15207	Sorghum	golgi	58.33	56.82
CDY54803	Canola	golgi	55.5	56.7
CDY64279	Canola	golgi	55.32	56.52
Zm00001d050483_P002	Maize	golgi	57.62	56.13
Os08t0554050-01	Rice	golgi	59.4	56.11
HORVU2Hr1G096100.42	Barley	mitochondrion, plastid	57.09	55.52
TraesCS7D01G276100.1	Wheat	golgi	58.51	55.0
TraesCS7A01G276200.2	Wheat	golgi	58.69	54.98
TraesCS7B01G174000.1	Wheat	golgi	58.33	54.47
HORVU5Hr1G086560.1	Barley	golgi	55.67	54.23
TraesCS5D01G353700.1	Wheat	golgi	55.5	53.97
TraesCS5B01G348700.1	Wheat	golgi	55.5	53.97
TraesCS5A01G347600.2	Wheat	golgi	55.32	53.24
OQU89872	Sorghum	endoplasmic reticulum, golgi, plasma membrane	56.03	53.11
Zm00001d021448_P002	Maize	mitochondrion	55.67	52.86
TraesCS2A01G405000.3	Wheat	golgi	58.51	52.72
HORVU7Hr1G058080.1	Barley	plastid	59.04	51.31
CDY53645	Canola	mitochondrion	46.45	49.43
CDY50845	Canola	cytosol, endoplasmic reticulum, golgi, plastid	46.45	49.25
CDY32271	Canola	plastid	47.34	48.55
CDX90501	Canola	mitochondrion	47.52	48.46
CDY40517	Canola	mitochondrion	47.34	48.46
CDY60713	Canola	mitochondrion	46.45	47.38
CDY04145	Canola	cytosol	25.35	38.96
CDY60465	Canola	mitochondrion	29.26	36.67
CDY43245	Canola	cytosol	29.08	36.44
CDX81230	Canola	mitochondrion	32.45	35.95
CDY18704	Canola	mitochondrion	32.45	35.81
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	29.96	35.5
CDY26456	Canola	golgi	31.91	35.43
CDX78650	Canola	golgi	31.74	35.24
CDX69504	Canola	golgi	31.74	35.17
CDX70647	Canola	golgi	31.56	35.11
CDX70637	Canola	golgi	31.56	34.9
CDY04814	Canola	golgi	33.51	33.99
CDY34715	Canola	cytosol, endoplasmic reticulum, golgi	22.87	33.25
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	29.26	33.13
CDX91985	Canola	golgi	30.14	33.07
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	29.26	33.07
CDY24821	Canola	cytosol, endoplasmic reticulum, golgi	30.14	33.01
CDX74265	Canola	cytosol, endoplasmic reticulum, golgi	29.96	32.88
CDY34713	Canola	cytosol	26.06	31.55
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	23.4	28.63
CDX74650	Canola	nucleus, plastid	32.27	28.48
CDX78207	Canola	plastid	32.27	28.22
CDY33687	Canola	nucleus, plastid	32.09	28.15
CDX73509	Canola	plastid	31.91	27.95
CDY40321	Canola	plastid	30.5	26.38
CDY55908	Canola	plastid	29.79	26.33
CDY10480	Canola	plastid	30.14	25.95
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	25.89	25.0
CDY18412	Canola	plastid	31.21	24.44
CDX93336	Canola	plastid	30.85	23.93
CDY14499	Canola	plastid	30.32	23.82
CDY07758	Canola	plastid	30.32	23.82
CDY69490	Canola	nucleus, plastid	5.67	23.53
CDY68289	Canola	nucleus, plastid	5.67	23.53
CDY39044	Canola	nucleus, plastid	5.67	23.53
CDY13557	Canola	nucleus, plastid	5.67	23.53
CDX85906	Canola	nucleus, plastid	5.67	23.53
CDX85735	Canola	nucleus, plastid	5.67	23.53
CDX78406	Canola	nucleus, plastid	5.67	23.53
CDX70375	Canola	nucleus, plastid	5.67	23.53
CDX69362	Canola	nucleus, plastid	5.67	23.53
CDX68121	Canola	nucleus, plastid	5.67	23.53

Protein Annotations

KEGG:00052+2.4.1.22	KEGG:00514+2.4.1.221	MapMan:35.1	GO:A0A078H1V9	UniProt:A0A078H1V9	EnsemblPlants:CDY31477
ProteinID:CDY31477	ProteinID:CDY31477.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSBRNA2T00047753001	PFAM:PF10250	PIRSF:PIRSF009360
PANTHER:PTHR31818	PANTHER:PTHR31818:SF1	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EED61C	SEG:seg

Description

BnaC05g15860DBnaC05g15860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1V9]

Coordinates

chrLK032273:-:140707..143404

Molecular Weight (calculated)

65175.9 Da

IEP (calculated)

9.747

GRAVY (calculated)

-0.670

Length

564 amino acids

Sequence
(BLAST)

001: MAFQRRRYNY YNRLRRLLPL ICGFSGALLI LFALLSVFSP PPDDSDRRIS KQQINYGVND EKKHVAVVVF RVPRSGGRLD RDIWRSWNAQ LFYGCCNAST
101: KFPNAKAITR SDRYLAIATS GGLNQQRTGI VDAVVAARIL NATLVIPKLD QKSYWKDASD FSHIFQVDWF ISFLSKDVKI IEQLPPKRGR TWSPSRMRVP
201: RKCNEKCYIN RVLPVLQKRH AVQLNKFDYR LSNKLRDDLQ KLRCRVNYHA LKFTDPILKM GNELVRRMRS RSKHYIALHL RFEPDMLAFS GCYYGGGDKE
301: KKELGSIRRR WKTLHVNNPE KQRRQGRCPL TPEEVGLMLR ALGYGSDVHI YVASGEVYGG EESLAPLKAL FPHFYSKDTI ATKEELEPFS SYSSRMAALD
401: FLVCDESDVF VTNNNGNMAR ILAGRRRYFG HKPTIRPNAK KLYKLFLSKE NTTWEEFASR VRTFQKGFMG EPKEVRAGRG EFHENPSTCI CEAKAKEGGM
501: DSRKLGKKNK KEGDEPKEDE DAEWSSDYEE DQTDLHDRGL YNGTRLDYED MSSDEPELEE MLSD

Best Arabidopsis Sequence Match ( AT1G20550.1 )
(BLAST)

001: MAFQRRRNNY YNRLRRLLPF ICAVSGALLI LFALLSILSP PPDDSDRRIS KHINYGANDE KKNTPVVFTV PRGGGRSDRD IWRSWNAEFF YGCCNASSKF
101: PNAKAITRND RYLAIATSGG LNQQRTGIVD AVVAARILNA TLVIPKLDQK SYWKDASDFS NIFDVDWFMS FLSKDVKIIE KLPQKGGQTW SPRRMRVPRK
201: CNEKCYINRV LPVLQKRHAV QLNKFDYRLS NKLRDDLQKL RCRVNYHALK FTDPILEMGN ELVRRMRKRS KHFIALHLRF EPDMLAFSGC YYGGGEKEKK
301: ELGTIRRRWK TLHVNNPEKQ RRQGRCPLTP EEVGLMLRAL GYGSDVHIYV ASGEVYGGEK SLAPLKALFP HFYSKDTIAT KMELKPFSSY SSRMAALDFL
401: VCDESDVFVT NNNGNMARIL AGRRRYFGHK PTIRPNAKKL YKLFMSKENT TWEEFASRVR TFQKGFMGEP KEVRAGKGEF HENPAACICE DTDAKVKAGK
501: MDSRKFGKKE QKEDEDAELS SSETDYEEDQ TDLQDRGLYN GTRLDYDDAL SVSEEPELEE MLSD

Arabidopsis Description

OFUT6O-fucosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HSU3]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.