Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- endoplasmic reticulum 3
- golgi 4
- extracellular 2
- plasma membrane 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
26455813
|
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011606 | Potato | golgi | 93.45 | 93.62 |
| Solyc12g094590.1.1 | Tomato | unclear | 71.54 | 64.42 |
| VIT_18s0001g00100.t01 | Wine grape | endoplasmic reticulum, golgi, mitochondrion | 63.86 | 59.51 |
| KRH60950 | Soybean | endoplasmic reticulum | 62.92 | 58.64 |
| KRH51625 | Soybean | golgi, mitochondrion, vacuole | 62.73 | 58.26 |
| GSMUA_Achr3P14740_001 | Banana | mitochondrion | 56.55 | 57.85 |
| AT1G20550.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 60.49 | 57.27 |
| GSMUA_Achr8P13270_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 47.38 | 57.11 |
| CDY31477 | Canola | extracellular, golgi, plasma membrane | 60.3 | 57.09 |
| AT1G76270.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 61.05 | 56.99 |
| Bra025826.1-P | Field mustard | extracellular, golgi, plasma membrane | 60.3 | 56.99 |
| CDX73250 | Canola | golgi | 61.8 | 56.8 |
| CDY29524 | Canola | extracellular, golgi, plasma membrane | 59.93 | 56.74 |
| Bra015771.1-P | Field mustard | golgi | 61.61 | 56.63 |
| CDX87622 | Canola | nucleus | 59.18 | 56.23 |
| Solyc01g112070.2.1 | Tomato | nucleus | 56.18 | 55.35 |
| EES15207 | Sorghum | golgi | 58.43 | 53.89 |
| Os04t0563000-01 | Rice | endoplasmic reticulum, golgi | 55.06 | 53.26 |
| Zm00001d050483_P002 | Maize | golgi | 57.49 | 53.02 |
| TraesCS2D01G401900.1 | Wheat | golgi | 56.74 | 52.88 |
| KXG26900 | Sorghum | golgi | 56.93 | 52.5 |
| TraesCS2B01G423100.1 | Wheat | golgi | 56.18 | 52.45 |
| Os08t0554050-01 | Rice | golgi | 58.24 | 52.09 |
| TraesCS7D01G276100.1 | Wheat | golgi | 58.43 | 52.0 |
| TraesCS5B01G348700.1 | Wheat | golgi | 56.37 | 51.9 |
| TraesCS7A01G276200.2 | Wheat | golgi | 58.43 | 51.83 |
| HORVU5Hr1G086560.1 | Barley | golgi | 56.18 | 51.81 |
| Zm00001d002668_P004 | Maize | golgi | 56.18 | 51.55 |
| TraesCS7B01G174000.1 | Wheat | golgi | 58.24 | 51.49 |
| TraesCS5D01G353700.1 | Wheat | golgi | 55.81 | 51.38 |
| HORVU2Hr1G096100.42 | Barley | mitochondrion, plastid | 55.43 | 51.03 |
| TraesCS5A01G347600.2 | Wheat | golgi | 55.99 | 51.02 |
| GSMUA_Achr5P19070_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 57.87 | 50.82 |
| OQU89872 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 55.99 | 50.25 |
| Zm00001d021448_P002 | Maize | mitochondrion | 55.43 | 49.83 |
| Solyc06g060750.2.1 | Tomato | mitochondrion | 49.44 | 48.89 |
| TraesCS2A01G405000.3 | Wheat | golgi | 56.37 | 48.08 |
| HORVU7Hr1G058080.1 | Barley | plastid | 58.05 | 47.77 |
| Solyc10g074490.1.1 | Tomato | golgi | 57.3 | 47.44 |
| Solyc08g078540.2.1 | Tomato | mitochondrion, plastid | 49.25 | 44.43 |
| Solyc01g010930.2.1 | Tomato | cytosol, extracellular | 22.1 | 44.19 |
| Solyc11g005870.1.1 | Tomato | mitochondrion | 33.71 | 36.51 |
| Solyc05g013140.2.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 32.96 | 34.99 |
| Solyc06g069380.2.1 | Tomato | mitochondrion | 31.84 | 34.41 |
| Solyc03g114730.2.1 | Tomato | cytosol | 32.02 | 34.27 |
| Solyc12g038670.1.1 | Tomato | cytosol | 32.02 | 33.53 |
| Solyc04g074670.2.1 | Tomato | mitochondrion | 33.33 | 33.27 |
| Solyc03g096370.2.1 | Tomato | golgi, mitochondrion, nucleus | 29.96 | 30.36 |
| Solyc10g085050.1.1 | Tomato | cytosol | 30.9 | 27.36 |
| Solyc09g011860.2.1 | Tomato | plastid | 32.96 | 27.33 |
| Solyc07g041750.2.1 | Tomato | plastid | 32.4 | 26.78 |
| Solyc11g010230.1.1 | Tomato | nucleus | 5.62 | 22.06 |
| Solyc05g051500.2.1 | Tomato | nucleus, plastid | 5.62 | 22.06 |
| Solyc04g081150.2.1 | Tomato | nucleus, plastid | 5.62 | 22.06 |
| Solyc04g074580.1.1 | Tomato | nucleus, plastid | 5.62 | 22.06 |
Protein Annotations
| MapMan:35.1 | InterPro:FucosylTrfase_pln | InterPro:GDP-Fuc_O-FucTrfase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0006004 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0016757 | UniProt:K4DHL3 | PFAM:PF10250 | PIRSF:PIRSF009360 | PANTHER:PTHR31818 |
| PANTHER:PTHR31818:SF1 | EnsemblPlantsGene:Solyc12g098400.1 | EnsemblPlants:Solyc12g098400.1.1 | TMHMM:TMhelix | UniParc:UPI000276A1F1 | SEG:seg |
Description
No Description!
Coordinates
chr12:+:65919002..65922488
Molecular Weight (calculated)
61364.6 Da
IEP (calculated)
9.805
GRAVY (calculated)
-0.479
Length
534 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSRRRHHH FFTHGRWLIP AITVASIFLL LFFFLSILAP SPNGNRIFLL PHRDSSGEND DAEDSPLPVP AKERVSKRDM WSSRNSNLFY GCSDASKKFR
101: KAQDITHPNR YLSIVTSGGL NQQRTGITDA VVAARILNAT LVVPKLDKSS YWKDSSVFSD IFDVDWFIKY LANDVSVVKE LPLRKGQIWL PYRMRVPRKC
201: SDSCYIHRVL PVLKKKHAVQ IMKFDYRLAN SLDTDLQKLR CRVNYHAVKF TDPILRMGEK LVHRMRMKSK HFIALHLRFE PDMLAFSGCY YGGGDKEREE
301: LGKIRKKWKT LPESHPDKAR RHGRCPMTPE EVGLMLRSLG YSEDVHIYVA SGETYGGNET LTPLKTLFPN FYTKDTLASK DELAPFSAFS SRMAALDFIV
401: CDESDVFVAN NHGNMAKILA GRRRYFGHKP TIRPNGRKLF RVFLNKNYMS HKEFVYRINK YQKGFMGEPK EVSPTWGVFH ENPYSCICEK VDNSTQGEVS
501: NSTSRVETFT RVTKTTDYDP DTPDDPEVDV LLSD
101: KAQDITHPNR YLSIVTSGGL NQQRTGITDA VVAARILNAT LVVPKLDKSS YWKDSSVFSD IFDVDWFIKY LANDVSVVKE LPLRKGQIWL PYRMRVPRKC
201: SDSCYIHRVL PVLKKKHAVQ IMKFDYRLAN SLDTDLQKLR CRVNYHAVKF TDPILRMGEK LVHRMRMKSK HFIALHLRFE PDMLAFSGCY YGGGDKEREE
301: LGKIRKKWKT LPESHPDKAR RHGRCPMTPE EVGLMLRSLG YSEDVHIYVA SGETYGGNET LTPLKTLFPN FYTKDTLASK DELAPFSAFS SRMAALDFIV
401: CDESDVFVAN NHGNMAKILA GRRRYFGHKP TIRPNGRKLF RVFLNKNYMS HKEFVYRINK YQKGFMGEPK EVSPTWGVFH ENPYSCICEK VDNSTQGEVS
501: NSTSRVETFT RVTKTTDYDP DTPDDPEVDV LLSD
001: MNFHRRRYPY YNRLRRLLPL VIAVSLSLLI LFAFLSFLAP PPGDSDRLPP RVRYSSNDAI KATGFHIPRA GGRSDRDIWR SRNAEFFFGC SNASSKFANS
101: KAVTRNDRYL VIATSGGLNQ QRTGIVDAVV AARILNATLV VPKLDQKSYW KDASDFSHIF DVDWFISFLS GDVRIIKQLP LKGGRTWSTS RMRVPRKCNE
201: RCYINRVLPV LLKRHAVQLN KFDYRLSNKL SDDLQKLRCR VNYHALKFTD PILTMGNELV RRMRLRSKHF IALHLRYEPD MLAFSGCYYG GGDKERRELA
301: AIRRRWKTLH INNPEKQRRQ GRCPLTPEEV GLMLRALGYG SDVHIYVASG EVYGGEESLA PLKALFPHFY SKDTIATKEE LEPFSSYSSR MAALDFLVCD
401: ESDVFVTNNN GNMAKILAGR RRYLGHKPTV RPNAKKLYRL FMNKENTTWE EFSSKVRSFQ RGFMGEPKEV RAGRGEFHEN PSTCICEDTE AKAKAQLESR
501: KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS DLQDRGLYNG TSLDYDDPST SDEPELEAML SD
101: KAVTRNDRYL VIATSGGLNQ QRTGIVDAVV AARILNATLV VPKLDQKSYW KDASDFSHIF DVDWFISFLS GDVRIIKQLP LKGGRTWSTS RMRVPRKCNE
201: RCYINRVLPV LLKRHAVQLN KFDYRLSNKL SDDLQKLRCR VNYHALKFTD PILTMGNELV RRMRLRSKHF IALHLRYEPD MLAFSGCYYG GGDKERRELA
301: AIRRRWKTLH INNPEKQRRQ GRCPLTPEEV GLMLRALGYG SDVHIYVASG EVYGGEESLA PLKALFPHFY SKDTIATKEE LEPFSSYSSR MAALDFLVCD
401: ESDVFVTNNN GNMAKILAGR RRYLGHKPTV RPNAKKLYRL FMNKENTTWE EFSSKVRSFQ RGFMGEPKEV RAGRGEFHEN PSTCICEDTE AKAKAQLESR
501: KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS DLQDRGLYNG TSLDYDDPST SDEPELEAML SD
Arabidopsis Description
OFUT16O-fucosyltransferase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q949U4]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.