Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69289 | Canola | cytosol | 52.82 | 59.09 |
| GSMUA_Achr3P14740_001 | Banana | mitochondrion | 69.53 | 59.0 |
| GSMUA_Achr5P19070_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 75.17 | 54.77 |
| Os04t0563000-01 | Rice | endoplasmic reticulum, golgi | 66.59 | 53.44 |
| VIT_18s0001g00100.t01 | Wine grape | endoplasmic reticulum, golgi, mitochondrion | 67.27 | 52.01 |
| TraesCS2B01G423100.1 | Wheat | golgi | 65.69 | 50.87 |
| TraesCS2D01G401900.1 | Wheat | golgi | 65.69 | 50.79 |
| KXG26900 | Sorghum | golgi | 66.37 | 50.78 |
| PGSC0003DMT400048017 | Potato | golgi | 62.3 | 50.64 |
| Solyc01g112070.2.1 | Tomato | nucleus | 61.85 | 50.55 |
| Zm00001d002668_P004 | Maize | golgi | 66.37 | 50.52 |
| HORVU2Hr1G096100.42 | Barley | mitochondrion, plastid | 65.46 | 50.0 |
| KRH74090 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 62.98 | 50.0 |
| KRH60950 | Soybean | endoplasmic reticulum | 64.56 | 49.91 |
| VIT_03s0038g03240.t01 | Wine grape | mitochondrion | 66.59 | 49.83 |
| CDY31477 | Canola | extracellular, golgi, plasma membrane | 63.21 | 49.65 |
| CDX87622 | Canola | nucleus | 62.98 | 49.64 |
| Bra025826.1-P | Field mustard | extracellular, golgi, plasma membrane | 63.21 | 49.56 |
| CDY29524 | Canola | extracellular, golgi, plasma membrane | 62.98 | 49.47 |
| AT1G20550.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 62.75 | 49.29 |
| KRH51625 | Soybean | golgi, mitochondrion, vacuole | 63.88 | 49.22 |
| KRH14026 | Soybean | golgi | 62.98 | 49.21 |
| PGSC0003DMT400043331 | Potato | extracellular | 59.82 | 48.89 |
| AT1G76270.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 62.98 | 48.78 |
| Solyc12g094590.1.1 | Tomato | unclear | 65.01 | 48.57 |
| PGSC0003DMT400075381 | Potato | golgi | 65.01 | 48.57 |
| AT4G38390.1 | Thale cress | endoplasmic reticulum, nucleus, plasma membrane | 60.05 | 48.28 |
| Bra015771.1-P | Field mustard | golgi | 62.98 | 48.02 |
| CDX73250 | Canola | golgi | 62.75 | 47.85 |
| PGSC0003DMT400011606 | Potato | golgi | 57.11 | 47.47 |
| Solyc12g098400.1.1 | Tomato | unclear | 57.11 | 47.38 |
| TraesCS2A01G405000.3 | Wheat | golgi | 65.69 | 46.49 |
| GSMUA_Achr7P07030_001 | Banana | golgi | 53.72 | 46.12 |
| CDY54803 | Canola | golgi | 56.88 | 45.65 |
| CDY64279 | Canola | golgi | 56.66 | 45.47 |
| Bra033562.1-P | Field mustard | golgi | 56.43 | 45.37 |
| GSMUA_Achr1P04270_001 | Banana | plastid | 54.18 | 44.28 |
| Solyc10g074490.1.1 | Tomato | golgi | 60.5 | 41.55 |
| GSMUA_Achr5P27790_001 | Banana | cytosol | 37.47 | 39.52 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular | 38.37 | 38.9 |
| GSMUA_Achr9P18530_001 | Banana | endoplasmic reticulum, golgi | 36.79 | 35.75 |
| GSMUA_Achr10P... | Banana | golgi, mitochondrion, vacuole | 36.57 | 33.13 |
| GSMUA_Achr8P16870_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 35.67 | 32.31 |
| GSMUA_Achr7P20110_001 | Banana | cytosol | 35.67 | 31.47 |
| GSMUA_Achr3P10660_001 | Banana | cytosol, golgi, plasma membrane | 36.34 | 31.45 |
| GSMUA_Achr4P09700_001 | Banana | cytosol | 35.89 | 31.42 |
| GSMUA_Achr10P... | Banana | cytosol | 35.89 | 31.18 |
| GSMUA_Achr3P06610_001 | Banana | mitochondrion, vacuole | 37.47 | 31.09 |
| GSMUA_Achr2P14760_001 | Banana | golgi, plasma membrane, vacuole | 35.67 | 30.33 |
| GSMUA_Achr4P24250_001 | Banana | plasma membrane | 25.96 | 25.96 |
| GSMUA_Achr4P24230_001 | Banana | golgi | 18.96 | 24.35 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plasma membrane, plastid | 31.15 | 23.75 |
| GSMUA_Achr9P16090_001 | Banana | nucleus, peroxisome, plasma membrane | 31.15 | 22.7 |
| GSMUA_Achr5P28820_001 | Banana | plastid | 26.64 | 22.35 |
| GSMUA_Achr9P14950_001 | Banana | golgi, plasma membrane | 6.55 | 3.89 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P13270_001 | EnsemblPlants:GSMUA_Achr8T13270_001 | EnsemblPlantsGene:GSMUA_Achr8G13270_001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 |
| GO:GO:0006004 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | GO:GO:0016757 | InterPro:FucosylTrfase_pln |
| InterPro:GDP-Fuc_O-FucTrfase | PANTHER:PTHR31818 | PANTHER:PTHR31818:SF1 | PFAM:PF10250 | PIRSF:PIRSF009360 | UniParc:UPI000296EFE1 |
| UniProt:M0TQ30 | MapMan:35.1 | : | : | : | : |
Description
Putative DUF246 domain-containing protein At1g04910 [Source:GMGC_GENE;Acc:GSMUA_Achr8G13270_001]
Coordinates
chr8:-:10054226..10058499
Molecular Weight (calculated)
50988.0 Da
IEP (calculated)
9.644
GRAVY (calculated)
-0.219
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKIFCCLQI IDGVVAARIL NATLVVPILD QDSFWNDASD FSDIFDVDWF ITSLTKDVKI IKELPEKDGK VIWTPYTMRV PRKCTPRCYQ SRVLPVLTKK
101: HVVRLTKFDY RLSNKLDIDL QKLRCRVNYQ GLKFTDQIQV MGDTLIQRMK ARSKHFIALH LRFEPDMLAF SGCYYGGGEK ERTELGAIRK RWKNLHASNP
201: EKGHRHGKCP LIPEEVGLML RALGFGNDVH LYVASGEIYG GEETLAPLKA LFPNFHSKET LATKEELAPF SSYSSRMAAL DFIVCDGSDV FVTNNNGNMA
301: RMLAGQRRYF GHKRTIRPNA KKLYSLFLNR TSMTWETFSS RICIFQRGFM GEPNEVRPGR GGFHEHPSAC ICGSSEWSSK FSNKRYRNNK IFTLHKVLDI
401: RYLEIPLIIS STRRAWQILA ELEVHSLIIS SLSFICVLFT YFY
101: HVVRLTKFDY RLSNKLDIDL QKLRCRVNYQ GLKFTDQIQV MGDTLIQRMK ARSKHFIALH LRFEPDMLAF SGCYYGGGEK ERTELGAIRK RWKNLHASNP
201: EKGHRHGKCP LIPEEVGLML RALGFGNDVH LYVASGEIYG GEETLAPLKA LFPNFHSKET LATKEELAPF SSYSSRMAAL DFIVCDGSDV FVTNNNGNMA
301: RMLAGQRRYF GHKRTIRPNA KKLYSLFLNR TSMTWETFSS RICIFQRGFM GEPNEVRPGR GGFHEHPSAC ICGSSEWSSK FSNKRYRNNK IFTLHKVLDI
401: RYLEIPLIIS STRRAWQILA ELEVHSLIIS SLSFICVLFT YFY
001: MAFQRRRNNY YNRLRRLLPF ICAVSGALLI LFALLSILSP PPDDSDRRIS KHINYGANDE KKNTPVVFTV PRGGGRSDRD IWRSWNAEFF YGCCNASSKF
101: PNAKAITRND RYLAIATSGG LNQQRTGIVD AVVAARILNA TLVIPKLDQK SYWKDASDFS NIFDVDWFMS FLSKDVKIIE KLPQKGGQTW SPRRMRVPRK
201: CNEKCYINRV LPVLQKRHAV QLNKFDYRLS NKLRDDLQKL RCRVNYHALK FTDPILEMGN ELVRRMRKRS KHFIALHLRF EPDMLAFSGC YYGGGEKEKK
301: ELGTIRRRWK TLHVNNPEKQ RRQGRCPLTP EEVGLMLRAL GYGSDVHIYV ASGEVYGGEK SLAPLKALFP HFYSKDTIAT KMELKPFSSY SSRMAALDFL
401: VCDESDVFVT NNNGNMARIL AGRRRYFGHK PTIRPNAKKL YKLFMSKENT TWEEFASRVR TFQKGFMGEP KEVRAGKGEF HENPAACICE DTDAKVKAGK
501: MDSRKFGKKE QKEDEDAELS SSETDYEEDQ TDLQDRGLYN GTRLDYDDAL SVSEEPELEE MLSD
101: PNAKAITRND RYLAIATSGG LNQQRTGIVD AVVAARILNA TLVIPKLDQK SYWKDASDFS NIFDVDWFMS FLSKDVKIIE KLPQKGGQTW SPRRMRVPRK
201: CNEKCYINRV LPVLQKRHAV QLNKFDYRLS NKLRDDLQKL RCRVNYHALK FTDPILEMGN ELVRRMRKRS KHFIALHLRF EPDMLAFSGC YYGGGEKEKK
301: ELGTIRRRWK TLHVNNPEKQ RRQGRCPLTP EEVGLMLRAL GYGSDVHIYV ASGEVYGGEK SLAPLKALFP HFYSKDTIAT KMELKPFSSY SSRMAALDFL
401: VCDESDVFVT NNNGNMARIL AGRRRYFGHK PTIRPNAKKL YKLFMSKENT TWEEFASRVR TFQKGFMGEP KEVRAGKGEF HENPAACICE DTDAKVKAGK
501: MDSRKFGKKE QKEDEDAELS SSETDYEEDQ TDLQDRGLYN GTRLDYDDAL SVSEEPELEE MLSD
Arabidopsis Description
OFUT6O-fucosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HSU3]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.