Factsheet for GSMUA_Achr9P14950_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

plastid 1
nucleus 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78406	Canola	nucleus, plastid	18.23	100.0
KRH31323	Soybean	nucleus	18.23	100.0
Os03t0390600-02	Rice	nucleus	18.23	100.0
PGSC0003DMT400041662	Potato	nucleus, plastid	18.23	100.0
Solyc05g051500.2.1	Tomato	nucleus, plastid	18.23	100.0
TraesCS4A01G423800.1	Wheat	nucleus, plastid	18.23	100.0
TraesCS7B01G062700.1	Wheat	nucleus, plastid	18.23	100.0
TraesCS7D01G061500.1	Wheat	nucleus, plastid	18.23	100.0
GSMUA_Achr4P09700_001	Banana	cytosol	7.64	11.26
GSMUA_Achr7P20110_001	Banana	cytosol	7.51	11.16
GSMUA_Achr3P10660_001	Banana	cytosol, golgi, plasma membrane	7.64	11.13
GSMUA_Achr3P06610_001	Banana	mitochondrion, vacuole	7.77	10.86
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	8.45	10.84
GSMUA_Achr5P28820_001	Banana	plastid	7.64	10.8
GSMUA_Achr10P...	Banana	cytosol	7.24	10.59
GSMUA_Achr2P14760_001	Banana	golgi, plasma membrane, vacuole	7.24	10.36
GSMUA_Achr9P18530_001	Banana	endoplasmic reticulum, golgi	6.3	10.31
GSMUA_Achr4P24230_001	Banana	golgi	4.69	10.14
GSMUA_Achr10P...	Banana	golgi, mitochondrion, vacuole	6.57	10.02
GSMUA_Achr8P16870_001	Banana	endoplasmic reticulum, plasma membrane, plastid	6.57	10.02
GSMUA_Achr4P24250_001	Banana	plasma membrane	5.5	9.26
GSMUA_Achr9P16090_001	Banana	nucleus, peroxisome, plasma membrane	6.84	8.39
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	4.83	8.24
GSMUA_Achr5P27790_001	Banana	cytosol	4.42	7.86
GSMUA_Achr7P07030_001	Banana	golgi	5.23	7.56
GSMUA_Achr1P04270_001	Banana	plastid	5.36	7.38
GSMUA_Achr5P19070_001	Banana	endoplasmic reticulum, golgi, plasma membrane	5.63	6.91
GSMUA_Achr3P14740_001	Banana	mitochondrion	4.69	6.7
GSMUA_Achr8P13270_001	Banana	endoplasmic reticulum, golgi, plasma membrane	3.89	6.55

Protein Annotations

Gene3D:1.10.20.10	MapMan:12.1.4	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0000786	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	GO:GO:0046982	EnsemblPlantsGene:GSMUA_Achr9G14950_001	EnsemblPlants:GSMUA_Achr9P14950_001
EnsemblPlants:GSMUA_Achr9T14950_001	InterPro:Histone-fold	InterPro:Histone_H2A/H2B/H3	InterPro:Histone_H3/CENP-A	InterPro:IPR009072	UniProt:M0U0F3
PFAM:PF00125	PFAM:PF10250	PRINTS:PR00622	ScanProsite:PS00322	ScanProsite:PS00959	PANTHER:PTHR31741
PANTHER:PTHR31741:SF1	SMART:SM00428	SUPFAM:SSF47113	TMHMM:TMhelix	UniParc:UPI0002956D50	SEG:seg

Description

Histone H3.3 [Source:GMGC_GENE;Acc:GSMUA_Achr9G14950_001]

Coordinates

chr9:-:9774141..9783477

Molecular Weight (calculated)

84064.8 Da

IEP (calculated)

10.392

GRAVY (calculated)

-0.555

Length

746 amino acids

Sequence
(BLAST)

001: MQRRRVRPRR VTVMRLLLTI AVGTVFLVAL LAVQVSPSSS YSSSSSPGAY KLPKRHEIGY GSWRSEHKWV QEAVPPQLSK ASAAHHQWDS TSQETTEEFE
101: KLWKPPSDRG FVPCTKPSSS YSSPGESRGY LLVSTNGGLN QMRAGISDMV AVVRIINATL VIPKLDKSSF WQDSSNFSDV FDEDHFIHSL ANDVKIVKKL
201: PKELAASTKI VKYFKSWSGV EYYQDEISRL WNDNKVIRAA KSDSRLANNN LSSEIQKLRC RVFYESLRFA PSIEALGKLL VERMRSYGPF IALHLRFEKD
301: MLAFSGCTYG LSPHEANELT KIRENTPHWK VKDIDPMQQR SKGHCPLTPK EVGIFLSALG YPSSTPIYIA AGDIYGGDSH MADLQSRFPI LMSKEKLASA
401: EELDPFRPYA SQMAALDYIV SVESDVFVSS YLGNMARAVE GHRRFLGHRK TITPDRKSLV HLIDKIDRGS LKEGKKLSNM ILEAHKGRQG SPRKRKGPIS
501: GTRGKERFRS EEAFYENPLP DCLCRSESDD TTGHHHLKSS DNSSRSASLP CNKSQPFVSR QRNTARRDLD CPQAVEGLQI ALDLRCCQLW ISSGSKLRKE
601: EERTGGRSRE MARTKQTARK STGGKAPRKQ LATKAARKSA PTTGGVKKPH RYRPGTVALR EIRKYQKSTE LLIRKLPFQR LVREIAQDFK TDLRFQSHAV
701: LALQEAAEAY LVGLFEDTNL CAIHAKRVTI MPKDIQLARR IRGERA

Best Arabidopsis Sequence Match ( AT1G22460.1 )
(BLAST)

001: MRRRRKTVVV AVVIRRVLIW AICVMTLLCF LTVHIYVAPF NRLPKLHLNH HNTRRGYIID YNKSITEQSL TRNLSRPESN EIPLISNPKT NEIQYQSSIS
101: EHINNTELVP PHVSTSPSSS SKLNITSGIP DFDKLWKHPP NRNFVPCVSP NPSYTSPLES RGYLLVHTNG GLNQMRAGIC DMVAIARIIN ATLVVPELDK
201: RSFWQDTSKF SDVFDEDHFI NALSKDIRVI KKLPKGIDGL TKVVKHFKSY SGLSYYQNEI ASMWDEYKVI RAAKSDSRLA NNNLPPDIQK LRCRACYEAL
301: RFSTKIRSMG ELLVDRMRSY GLYIALHLRF EKEMLAFSGC NHGLSASEAA ELRRIRKNTA YWKVKDIDGR VQRLKGYCPL TPKEVGILLT ALGYSSDTPV
401: YIAAGEIYGG ESRLADLRSR FSMLMSKEKL ATREELKTFM NHSTQMAALD YIVSIESDVF IPSYSGNMAR AVEGHRRFLG HRKTISPDRK AIVRLVDRIG
501: RGAEKDNRKV YERINEIHKT RQGSPRRRKG PASGTKGLER HRSEESFYEN PLPDCLCQRD PSKAR

Arabidopsis Description

OFUT7O-fucosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:B7ZWR7]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.