Factsheet for GSMUA_Achr5P27790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
golgi 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	90.48	86.96
HORVU3Hr1G017120.2	Barley	cytosol, plastid	59.05	78.98
Zm00001d039702_P001	Maize	plastid	74.52	66.45
TraesCS3B01G110800.1	Wheat	mitochondrion	76.67	65.71
TraesCS3D01G095400.1	Wheat	mitochondrion	76.19	65.31
TraesCS3A01G095200.2	Wheat	mitochondrion	76.19	64.91
KXG31767	Sorghum	mitochondrion	75.24	64.1
EER92325	Sorghum	mitochondrion	75.0	63.0
Zm00001d029008_P001	Maize	mitochondrion	74.76	62.93
TraesCS4D01G175500.2	Wheat	mitochondrion, plastid	74.29	62.65
TraesCS4A01G131200.2	Wheat	mitochondrion, plastid	74.05	62.45
TraesCS4B01G173400.1	Wheat	mitochondrion	73.81	62.25
Os03t0328100-01	Rice	mitochondrion	73.81	62.25
HORVU4Hr1G051230.6	Barley	endoplasmic reticulum, golgi, mitochondrion	74.29	62.15
Zm00001d008692_P001	Maize	mitochondrion	74.05	62.08
GSMUA_Achr9P18530_001	Banana	endoplasmic reticulum, golgi	67.14	61.84
GSMUA_Achr8P16870_001	Banana	endoplasmic reticulum, plasma membrane, plastid	67.62	58.08
Os01t0168600-01	Rice	mitochondrion	39.52	56.85
GSMUA_Achr7P20110_001	Banana	cytosol	66.43	55.58
GSMUA_Achr3P10660_001	Banana	cytosol, golgi, plasma membrane	66.9	54.88
GSMUA_Achr10P...	Banana	cytosol	66.43	54.71
GSMUA_Achr4P09700_001	Banana	cytosol	65.0	53.95
GSMUA_Achr10P...	Banana	golgi, mitochondrion, vacuole	48.1	41.31
GSMUA_Achr3P06610_001	Banana	mitochondrion, vacuole	48.81	38.39
GSMUA_Achr2P14760_001	Banana	golgi, plasma membrane, vacuole	47.14	38.0
GSMUA_Achr8P13270_001	Banana	endoplasmic reticulum, golgi, plasma membrane	39.52	37.47
GSMUA_Achr3P14740_001	Banana	mitochondrion	42.86	34.48
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	47.14	34.08
GSMUA_Achr7P07030_001	Banana	golgi	41.19	33.53
GSMUA_Achr4P24230_001	Banana	golgi	27.14	33.04
GSMUA_Achr1P04270_001	Banana	plastid	42.62	33.03
GSMUA_Achr5P28820_001	Banana	plastid	41.43	32.95
GSMUA_Achr4P24250_001	Banana	plasma membrane	34.52	32.73
GSMUA_Achr9P16090_001	Banana	nucleus, peroxisome, plasma membrane	46.19	31.91
GSMUA_Achr5P19070_001	Banana	endoplasmic reticulum, golgi, plasma membrane	42.86	29.61
GSMUA_Achr9P14950_001	Banana	golgi, plasma membrane	7.86	4.42

Protein Annotations

MapMan:21.3.2.1.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:GSMUA_Achr5G27790_001
EnsemblPlants:GSMUA_Achr5P27790_001	EnsemblPlants:GSMUA_Achr5T27790_001	UniProt:M0T2A4	PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31741
PANTHER:PTHR31741:SF12	UniParc:UPI000296DC3F	SEG:seg	:	:	:

Description

Putative DUF246 domain-containing protein At1g04910 [Source:GMGC_GENE;Acc:GSMUA_Achr5G27790_001]

Coordinates

chr5:-:28234253..28236457

Molecular Weight (calculated)

48208.5 Da

IEP (calculated)

9.801

GRAVY (calculated)

-0.355

Length

420 amino acids

Sequence
(BLAST)

001: MSGIIKANSG VYKSNGYLKV SCNGGLNQMR AAICDMVTIA RYLNLTLVIP ELDKTSFWAD PSDFGDIFNV NHFINSLRDE VKIVKSLPKK FGRKIHTEPF
101: SMPPVSWSSE KYYLKQILPL IRKHKVIHFN RTDARLANNG LPLRLQRLRC RVNYEALRFT PEIEALGDKL ISILRRSGFF VVLHLRYEMD MLSFSGCTHG
201: CSDKETEELT RMRYAYPWWK EKEIVSEKKR LDGLCPLTPE ETALVLQALG FKRDTLIYIA SGGIYGGERR LAALRASYPK IVRKEMLLSA DELRPFQNHS
301: TQMAALDYLV SVASDVFVPT YDGNMAKVVE GHRRYTGFRR TIVLDRRELV ELLDLLRDGK LSWDQFSIAV KEVHKNRMGQ PTLRKVIPGR PKDEDYFYAN
401: PQECTGPPRS SNIESRKSDI

Best Arabidopsis Sequence Match ( AT1G14020.1 )
(BLAST)

001: MEVRSESNIT QARSDKLPLP PAVPKPRVQV WFVRVCSSIL VWTCLVQLFA AGELWHSRIF TGLTNQISRF SAPVEPVPLP PPLPPPRNYT SNGILLVSCN
101: GGLNQMRSAI CDMVTVARLL NLTLVVPELD KTSFWADPSG FEDIFDVRHF IDSLRDEVRI LRRLPKRFSR KYGYQMFEMP PVSWSDEKYY LKQVLPLFSK
201: HKVVHFNRTD TRLANNGLPL SLQWLRCRVN FQGLKFTPQL EALGSKLVRI LQQRGPFVAL HLRYEMDMLA FSGCTHGCTE EEAEELKKMR YTYPWWREKE
301: IVSEERRAQG LCPLTPEEVA LVLKALGFEK NTQIYIAAGE IYGSEHRLSV LREAFPRIVK KEMLLESAEL QQFQNHSSQM AALDFMVSVA SNTFIPTYDG
401: NMAKVVEGHR RYLGYKKTIL LDRKRLVELL DLHHNKTLTW DQFAVAVKEA HERRAGAPTH RRVISDKPKE EDYFYANPQE CLCEGTNCHD LFGHRNLTH

Arabidopsis Description

OFUT3O-fucosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ51]
SUBAcon: [cytosol,golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.