Factsheet for HORVU4Hr1G051230.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi

Predictor Summary:

mitochondrion 2
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion
Any Predictor:	endoplasmic reticulum, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
TargetP:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G131200.2	Wheat	mitochondrion, plastid	97.01	97.79
TraesCS4B01G173400.1	Wheat	mitochondrion	96.81	97.59
TraesCS4D01G175500.2	Wheat	mitochondrion, plastid	96.22	96.99
Os03t0328100-01	Rice	mitochondrion	85.66	86.35
EER92325	Sorghum	mitochondrion	82.47	82.8
Zm00001d029008_P001	Maize	mitochondrion	81.67	82.16
GSMUA_Achr5P27790_001	Banana	cytosol	62.15	74.29
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	62.55	71.85
HORVU3Hr1G017120.2	Barley	cytosol, plastid	44.62	71.34
HORVU4Hr1G074960.11	Barley	endoplasmic reticulum, golgi, plasma membrane	55.38	59.28
HORVU7Hr1G043230.10	Barley	golgi, plastid	56.97	56.41
HORVU5Hr1G070810.1	Barley	golgi	54.98	55.09
HORVU6Hr1G072260.25	Barley	cytosol	52.59	51.36
HORVU2Hr1G086020.2	Barley	mitochondrion	38.05	39.14
HORVU7Hr1G036450.20	Barley	golgi	40.44	38.45
HORVU2Hr1G097570.8	Barley	plastid	35.26	35.26
HORVU1Hr1G073150.1	Barley	plastid	40.04	33.56
HORVU5Hr1G086560.1	Barley	golgi	37.65	32.64
HORVU5Hr1G061540.6	Barley	nucleus, plasma membrane, plastid	41.04	32.34
HORVU2Hr1G096100.42	Barley	mitochondrion, plastid	34.86	30.17
HORVU7Hr1G058080.1	Barley	plastid	36.45	28.2
HORVU7Hr1G033030.1	Barley	extracellular	6.97	25.74
HORVU7Hr1G100690.1	Barley	nucleus, plastid	6.97	25.74

Protein Annotations

MapMan:21.3.2.1.1	UniProt:A0A287P0P2	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	EnsemblPlantsGene:HORVU4Hr1G051230	EnsemblPlants:HORVU4Hr1G051230.6	PFAM:PF10250
PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF22	TMHMM:TMhelix	UniParc:UPI000B475446	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:419294235..419297927

Molecular Weight (calculated)

57094.3 Da

IEP (calculated)

9.780

GRAVY (calculated)

-0.275

Length

502 amino acids

Sequence
(BLAST)

001: SEAHMAKQKA SLPVIRRRIG GVGLLRWAVR VASSILLWTA VLQLSTFFGL PLPPLRAARP SCIGNRNISA TAYAVTAVAS DDVGDLAPPA LPTRRSYRSN
101: GYLLISCNGG LNQMRAAICD MVTVARYLNL TMVVPELDKQ SFWADPSDFG DIFDVNHFIY SLRDEVKVIR ELPHKFNGKV PLSMQPVSWS SEKYYLRQIL
201: PLVRKHKVIR FSRTDSRLAN NGLPLKLQKL RCRVNYNALR FTPSIEALGN KMISSLRSTG YFVVLHLRYE MDMLAFSGCT HGCSGQETAE LTRMRYAYPW
301: WKEKEIDSEK KRLEGLCPLT PGETTLVLKA LGFPRDTRIY IASGEIYGGE KRLAALKAEF PNIVRKEMLL SEDELHLFQK HSTQMAALDY LVSVASDVFI
401: PSNDGNMAKV VEGHRRFMGF HRTIQLDRKK LVELIDLFED QELSWNEFCT AVKELHEGRM SQPTRRKVIA GQPKEEDYFY ANPYECLGPA RKRREKLKHT
501: EA

Best Arabidopsis Sequence Match ( AT2G03280.1 )
(BLAST)

001: MSVVVGDRSE STLMRSDYKA PPSQAIPKAR LQVWFFRVCS CILVWTCLIQ LFWHSQIFTG LTNHISRFSL PVQSVPLPPP LPPRNYTSNG ILLVSCNGGL
101: NQMRAAICDM VTVARLLNLT LVVPELDKKS FWADTSDFED IFDIKHFIDS LRDEVRIIRR LPKRYSKKYG FKLFEMPPVS WSNDKYYLQQ VLPRFSKRKV
201: IHFVRSDTRL ANNGLSLDLQ RLRCRVNFQG LRFTPRIEAL GSKLVRILQQ RGSFVALHLR YEMDMLAFSG CTHGCTDEEA EELKKMRYAY PWWREKEIVS
301: EERRVQGLCP LTPEEAVLVL KALGFQKDTQ IYIAAGEIFG GAKRLALLKE SFPRIVKKEM LLDPTELQQF QNHSSQMAAL DFIVSVASNT FIPTYYGNMA
401: KVVEGHRRYL GFKKTILLDR KRLVELLDLH NNKTLSWDQF AVAVKDAHQG RRMGEPTHRK VISVRPKEED YFYANPQECI S

Arabidopsis Description

SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.