Factsheet for TraesCS4B01G173400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
vacuole 1
plastid 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G131200.2	Wheat	mitochondrion, plastid	98.8	98.8
TraesCS4D01G175500.2	Wheat	mitochondrion, plastid	97.99	97.99
HORVU4Hr1G051230.6	Barley	endoplasmic reticulum, golgi, mitochondrion	97.59	96.81
Os03t0328100-01	Rice	mitochondrion	86.35	86.35
EER92325	Sorghum	mitochondrion	83.53	83.2
Zm00001d029008_P001	Maize	mitochondrion	82.73	82.57
GSMUA_Achr5P27790_001	Banana	cytosol	62.25	73.81
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	62.25	70.94
TraesCS3B01G110800.1	Wheat	mitochondrion	64.66	65.71
TraesCS4B01G286100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	56.22	59.45
TraesCS7B01G120300.1	Wheat	mitochondrion, plastid	56.63	56.51
TraesCS6B01G317300.1	Wheat	golgi, mitochondrion, plastid	55.42	56.33
TraesCS5B01G249700.2	Wheat	golgi	54.82	54.49
TraesCS2B01G372800.1	Wheat	mitochondrion	38.15	38.93
TraesCS7B01G082500.2	Wheat	golgi	40.76	38.45
TraesCS3B01G397600.1	Wheat	plastid	38.96	35.27
TraesCS2B01G432900.2	Wheat	plastid	34.94	34.39
TraesCS1B01G288800.1	Wheat	plastid	39.96	32.95
TraesCS5B01G348700.1	Wheat	golgi	37.75	32.41
TraesCS5B01G207300.2	Wheat	cytosol, plasma membrane, plastid	40.76	32.12
TraesCS2B01G423100.1	Wheat	golgi	35.94	31.29
TraesCS7B01G174000.1	Wheat	golgi	36.55	30.13
TraesCS7B01G062700.1	Wheat	nucleus, plastid	7.03	25.74
TraesCS7B01G063000.1	Wheat	plastid	7.03	25.74
TraesCS2B01G337200.1	Wheat	nucleus, plastid	7.03	25.74
TraesCS7B01G341600.1	Wheat	nucleus, plastid	7.03	25.74

Protein Annotations

EnsemblPlants:TraesCS4B01G173400.1	EnsemblPlantsGene:TraesCS4B01G173400	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	PANTHER:PTHR31741	PANTHER:PTHR31741:SF22
PFAM:PF10250	PIRSF:PIRSF009360	SEG:seg	TIGR:cd11299	TMHMM:TMhelix	MapMan:21.3.2.1.1

Description

No Description!

Coordinates

chr4B:+:379416350..379419416

Molecular Weight (calculated)

56546.7 Da

IEP (calculated)

9.878

GRAVY (calculated)

-0.278

Length

498 amino acids

Sequence
(BLAST)

001: MAKRKASLPV IRRRIGGVGL LRWAVRVASS IVLWTALLQL STFFGLPLSP LRAARPSCIG NRNTSATASA VTAVASDDVG DLAPPALPTR RSYRSNGYLL
101: ISCNGGLNQM RAAICDMVTV ARYLNLTMVV PELDKQSFWA DPSDFGDIFD VDHFIYSLRD EVKVIRELPH KFNGKVPLSM QPVSWSSEKY YLRQILPLVR
201: KHKVIRFSRT DSRLANNGLP LKLQKLRCHV NYNALRFTPS IEALGNKMIS SLRKTGSFVV LHLRYEMDML AFSGCTHGCS GQETAELTRM RYAYPWWKEK
301: EIDSEKKRLE GLCPLTPGET TLVLKALGFP RDTRIYIASG EIYGGEKRLA ALKAEFPNIV RKEMLLSEDE LHLFQKHSTQ MAALDYLVSV ASDVFIPSND
401: GNMAKVVEGH RRFMGFHRTI QLDRKKLVEL IDLFEDQELS WNEFCAAVKE LHEGRMSQPT RRKVIAGQPK EEDYFYANPY ECLGPARKRR EKLKHTET

Best Arabidopsis Sequence Match ( AT1G14020.1 )
(BLAST)

001: MEVRSESNIT QARSDKLPLP PAVPKPRVQV WFVRVCSSIL VWTCLVQLFA AGELWHSRIF TGLTNQISRF SAPVEPVPLP PPLPPPRNYT SNGILLVSCN
101: GGLNQMRSAI CDMVTVARLL NLTLVVPELD KTSFWADPSG FEDIFDVRHF IDSLRDEVRI LRRLPKRFSR KYGYQMFEMP PVSWSDEKYY LKQVLPLFSK
201: HKVVHFNRTD TRLANNGLPL SLQWLRCRVN FQGLKFTPQL EALGSKLVRI LQQRGPFVAL HLRYEMDMLA FSGCTHGCTE EEAEELKKMR YTYPWWREKE
301: IVSEERRAQG LCPLTPEEVA LVLKALGFEK NTQIYIAAGE IYGSEHRLSV LREAFPRIVK KEMLLESAEL QQFQNHSSQM AALDFMVSVA SNTFIPTYDG
401: NMAKVVEGHR RYLGYKKTIL LDRKRLVELL DLHHNKTLTW DQFAVAVKEA HERRAGAPTH RRVISDKPKE EDYFYANPQE CLCEGTNCHD LFGHRNLTH

Arabidopsis Description

OFUT3O-fucosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ51]
SUBAcon: [cytosol,golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.