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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G317300.1 Wheat golgi, mitochondrion, plastid 80.93 84.9
TraesCS6A01G287900.1 Wheat mitochondrion 81.32 83.94
TraesCS6D01G268600.1 Wheat mitochondrion 80.93 83.53
Os02t0726500-01 Rice golgi, mitochondrion, peroxisome, plastid 76.07 76.67
HORVU7Hr1G043230.10 Barley golgi, plastid 73.74 74.75
GSMUA_Achr9P18530_001 Banana endoplasmic reticulum, golgi 65.76 74.12
OQU85485 Sorghum mitochondrion 71.79 73.95
KRH03183 Soybean cytosol 52.53 73.77
Zm00001d017906_P003 Maize plastid 70.43 71.97
HORVU5Hr1G070810.1 Barley golgi 66.54 68.26
GSMUA_Achr3P10660_001 Banana cytosol, golgi, plasma membrane 67.12 67.38
CDY60465 Canola mitochondrion 58.95 67.33
CDY43245 Canola cytosol 58.95 67.33
PGSC0003DMT400010442 Potato golgi 64.59 67.21
PGSC0003DMT400063300 Potato cytosol 64.98 66.93
Solyc06g069380.2.1 Tomato mitochondrion 64.2 66.8
Solyc03g114730.2.1 Tomato cytosol 64.79 66.73
VIT_17s0000g04810.t01 Wine grape golgi 66.73 66.73
GSMUA_Achr7P20110_001 Banana cytosol 64.98 66.53
GSMUA_Achr4P09700_001 Banana cytosol 65.37 66.4
GSMUA_Achr10P... Banana cytosol 65.56 66.08
HORVU3Hr1G017120.2 Barley cytosol, plastid 39.88 65.29
KRH56756 Soybean golgi, peroxisome, plastid 65.37 65.24
PGSC0003DMT400006095 Potato cytosol 63.03 64.8
KRH54757 Soybean cytosol 65.56 64.07
Solyc12g038670.1.1 Tomato cytosol 62.65 63.14
KRH63160 Soybean cytosol 64.2 63.1
VIT_14s0083g00940.t01 Wine grape cytosol, vacuole 63.81 63.08
KRH45128 Soybean golgi 61.09 62.93
KRG93722 Soybean cytosol 62.84 62.72
AT5G15740.1 Thale cress golgi 61.87 62.6
Bra006319.1-P Field mustard golgi 61.67 62.4
CDY26456 Canola golgi 61.48 62.2
CDX70647 Canola golgi 61.28 62.13
Bra021472.1-P Field mustard mitochondrion 56.42 62.1
CDX78650 Canola golgi 61.28 62.01
KRH01414 Soybean golgi 60.89 61.98
CDX69504 Canola golgi 61.28 61.89
Bra008679.1-P Field mustard golgi 61.09 61.69
CDX70637 Canola golgi 61.09 61.57
AT3G02250.1 Thale cress golgi 60.89 61.13
CDX74265 Canola cytosol, endoplasmic reticulum, golgi 60.89 60.89
CDY24821 Canola cytosol, endoplasmic reticulum, golgi 60.89 60.78
Bra001038.1-P Field mustard cytosol, endoplasmic reticulum, golgi, mitochondrion 60.7 60.7
CDX91985 Canola golgi 60.7 60.7
Bra039166.1-P Field mustard cytosol, endoplasmic reticulum, golgi, mitochondrion 59.14 59.14
CDY34715 Canola cytosol, endoplasmic reticulum, golgi 43.19 57.22
CDY34713 Canola cytosol 51.56 56.87
HORVU4Hr1G074960.11 Barley endoplasmic reticulum, golgi, plasma membrane 48.25 52.88
HORVU4Hr1G051230.6 Barley endoplasmic reticulum, golgi, mitochondrion 51.36 52.59
HORVU2Hr1G086020.2 Barley mitochondrion 36.97 38.93
HORVU7Hr1G036450.20 Barley golgi 37.16 36.17
HORVU1Hr1G073150.1 Barley plastid 36.58 31.39
HORVU5Hr1G061540.6 Barley nucleus, plasma membrane, plastid 38.33 30.93
HORVU2Hr1G097570.8 Barley plastid 30.16 30.88
HORVU2Hr1G096100.42 Barley mitochondrion, plastid 32.3 28.62
HORVU5Hr1G086560.1 Barley golgi 31.52 27.98
HORVU7Hr1G058080.1 Barley plastid 32.49 25.73
HORVU7Hr1G100690.1 Barley nucleus, plastid 6.61 25.0
HORVU7Hr1G033030.1 Barley extracellular 6.61 25.0
Protein Annotations
EnsemblPlants:HORVU6Hr1G072260.25EnsemblPlantsGene:HORVU6Hr1G072260GO:GO:0003674GO:GO:0003824GO:GO:0005975GO:GO:0006004
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757InterPro:FucosylTrfase_plnInterPro:GDP-Fuc_O-FucTrfase
PANTHER:PTHR31741PANTHER:PTHR31741:SF41PFAM:PF10250SEG:segUniParc:UPI000B4809A8UniProt:A0A287UMV4
MapMan:21.3.2.1.1:::::
Description
No Description!
Coordinates
chrchr6H:-:502462082..502465032
Molecular Weight (calculated)
57466.0 Da
IEP (calculated)
7.242
GRAVY (calculated)
-0.381
Length
514 amino acids
Sequence
(BLAST)
001: GVQGDGGGGG NGPQGGRGGQ AEAPVGGGCG GAVADDEAVG APRHLHGAAL DLPRPAHGRR GDVGAARPHG LAVVPDGAAR DDGARRGEGR PADKDVVHLG
101: TDMNEPELGI YRNNGYLMVS CNGGLNQMRA AICDMVAIAR YLNVTLIVPE LDKTSFWNDP SEFQDIFDVE HFITSLRGEV HILRELPPRM KQRVEVGMFH
201: SMPPISWSDI SYYHNQILPL IQKHKVLHLN RTDARLANNG LPLDIQKLRC RVNYASLKFT PQIEELGRRV IQILRKNGPF LVLHLRYEMD MLAFSGCTEG
301: CTREEADELT RMRYAYPWWK EKVIDSYVKR KDGFCPLTPE EIALVLRALE IDRSMQIYIA AGEIYGGKRR MASLTSAYPN VVRKETLLEP SDLRFFQNHS
401: SQMAALDYLV SLESDIFVPT YDGNMAKVVE GHRRFMGFKK TILLDRKLIV DLVDQYKSGS LPWDEFSKLI KSVHANRMGS ASRRTVIPDK PKEEDYFYAN
501: PQECLHDPDL LRTL
Best Arabidopsis Sequence Match ( AT1G14020.1 )
(BLAST)
001: MEVRSESNIT QARSDKLPLP PAVPKPRVQV WFVRVCSSIL VWTCLVQLFA AGELWHSRIF TGLTNQISRF SAPVEPVPLP PPLPPPRNYT SNGILLVSCN
101: GGLNQMRSAI CDMVTVARLL NLTLVVPELD KTSFWADPSG FEDIFDVRHF IDSLRDEVRI LRRLPKRFSR KYGYQMFEMP PVSWSDEKYY LKQVLPLFSK
201: HKVVHFNRTD TRLANNGLPL SLQWLRCRVN FQGLKFTPQL EALGSKLVRI LQQRGPFVAL HLRYEMDMLA FSGCTHGCTE EEAEELKKMR YTYPWWREKE
301: IVSEERRAQG LCPLTPEEVA LVLKALGFEK NTQIYIAAGE IYGSEHRLSV LREAFPRIVK KEMLLESAEL QQFQNHSSQM AALDFMVSVA SNTFIPTYDG
401: NMAKVVEGHR RYLGYKKTIL LDRKRLVELL DLHHNKTLTW DQFAVAVKEA HERRAGAPTH RRVISDKPKE EDYFYANPQE CLCEGTNCHD LFGHRNLTH
Arabidopsis Description
OFUT3O-fucosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ51]
SUBAcon: [cytosol,golgi,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.