Factsheet for PGSC0003DMT400063300

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
golgi 2
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g114730.2.1	Tomato	cytosol	98.4	98.4
PGSC0003DMT400010442	Potato	golgi	86.77	87.65
PGSC0003DMT400006095	Potato	cytosol	85.37	85.2
KRH03183	Soybean	cytosol	61.12	83.33
VIT_17s0000g04810.t01	Wine grape	golgi	84.17	81.71
KRH56756	Soybean	golgi, peroxisome, plastid	80.56	78.06
GSMUA_Achr9P18530_001	Banana	endoplasmic reticulum, golgi	71.14	77.85
KRH63160	Soybean	cytosol	80.96	77.25
KRH54757	Soybean	cytosol	80.76	76.62
Zm00001d045763_P002	Maize	golgi, plastid	76.55	76.55
TraesCS7B01G120300.1	Wheat	mitochondrion, plastid	76.35	76.35
TraesCS7A01G213300.1	Wheat	mitochondrion, plastid	76.35	76.35
TraesCS7D01G215200.1	Wheat	mitochondrion, plastid	76.15	76.15
Zm00001d037367_P001	Maize	plastid	75.55	75.4
Os06t0284200-02	Rice	mitochondrion	76.75	75.39
HORVU7Hr1G043230.10	Barley	golgi, plastid	76.35	75.15
EER89610	Sorghum	plastid	76.35	74.27
OQU85485	Sorghum	mitochondrion	73.55	73.55
GSMUA_Achr4P09700_001	Banana	cytosol	74.55	73.52
TraesCS6D01G268600.1	Wheat	mitochondrion	73.35	73.49
TraesCS6B01G317300.1	Wheat	golgi, mitochondrion, plastid	72.14	73.47
TraesCS6A01G287900.1	Wheat	mitochondrion	73.15	73.29
GSMUA_Achr3P10660_001	Banana	cytosol, golgi, plasma membrane	75.15	73.24
Zm00001d017906_P003	Maize	plastid	73.35	72.76
Os02t0726500-01	Rice	golgi, mitochondrion, peroxisome, plastid	74.35	72.75
GSMUA_Achr10P...	Banana	cytosol	73.55	71.96
GSMUA_Achr7P20110_001	Banana	cytosol	72.34	71.91
TraesCS5A01G251600.3	Wheat	golgi	68.14	68.69
HORVU5Hr1G070810.1	Barley	golgi	68.14	67.86
TraesCS5D01G259500.1	Wheat	golgi	68.34	67.79
EER99050	Sorghum	golgi, mitochondrion, plastid	67.54	67.67
TraesCS5B01G249700.2	Wheat	golgi	67.94	67.66
HORVU6Hr1G072260.25	Barley	cytosol	66.93	64.98
PGSC0003DMT400072871	Potato	cytosol, extracellular	50.1	64.27
PGSC0003DMT400045812	Potato	cytosol	30.66	45.67
PGSC0003DMT400079224	Potato	endoplasmic reticulum, golgi, plasma membrane	41.48	38.98
PGSC0003DMT400036338	Potato	cytosol, golgi, mitochondrion	37.27	34.77
PGSC0003DMT400048017	Potato	golgi	35.07	32.11
PGSC0003DMT400011606	Potato	golgi	34.07	31.89
PGSC0003DMT400030987	Potato	mitochondrion	34.07	31.48
PGSC0003DMT400028801	Potato	plastid	40.28	31.36
PGSC0003DMT400052382	Potato	plastid	40.08	31.15
PGSC0003DMT400043331	Potato	extracellular	32.46	29.89
PGSC0003DMT400075381	Potato	golgi	35.47	29.85
PGSC0003DMT400012157	Potato	golgi, plastid, vacuole	34.87	29.54
PGSC0003DMT400041662	Potato	nucleus, plastid	7.21	26.47
PGSC0003DMT400043254	Potato	nucleus, plastid	7.21	26.47
PGSC0003DMT400009656	Potato	nucleus, plastid	7.21	26.47
PGSC0003DMT400079216	Potato	nucleus, plastid	7.21	26.47

Protein Annotations

EnsemblPlants:PGSC0003DMT400063300	EnsemblPlantsGene:PGSC0003DMG400024619	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0006004
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase
PANTHER:PTHR31741	PANTHER:PTHR31741:SF5	PFAM:PF10250	PGSC:PGSC0003DMG400024619	PIRSF:PIRSF009360	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002949620	UniProt:M1CAF3	MapMan:21.3.2.1.1	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400024619]

Coordinates

chr3:-:54709796..54713578

Molecular Weight (calculated)

57305.6 Da

IEP (calculated)

8.704

GRAVY (calculated)

-0.286

Length

499 amino acids

Sequence
(BLAST)

001: MGFKAAALGD SRVEKLKSSM VSRSRMKLWM IRAATSILLW TCVVQLMTLG ETWGPRVLKG WPSCFSQEST AAFALQSSPE VPARVLPPKR VYKNNGYLMV
101: SCNGGLNQMR SAICDMVAIA RYLNVTLIVP ELDKTSFWAD PSEFQDIFDV DHFITSLRDE VRILRKLPPR LKRRVELGML YTMPPISWSD ISYYHNQILP
201: LIQKYKVVHL NRTDARLANN GQPMEMQKLR CRVNFDALKF TPQIEELGRK VIRLLRQKGP FMVLHLRYEM DMLAFSGCSQ GCNKDEIDEL TRMRYAYPWW
301: KEKIINSDLK RRDGLCPLTP EETALTLRAL DIDSSIQVYI AAGEIYGGRR RMASLAAAYP NLVRKETLLE PSDLMFFQNH SSQMAALDYL VSLESDIFVP
401: TYDGNMAKVV EGHRRYLGYK KTILLDRKLL VDLIDQHTAG SLTWDEFSNA VKHAHAERMG NPTKRLVIPD RPKEEDYFYS NPWECLESSN EDETLSSSI

Best Arabidopsis Sequence Match ( AT5G15740.1 )
(BLAST)

001: MCKMEKFLYH RKLWEMNVKL LGESKVEKLK NSFVSRPRMS LWMIRAVTVL LLWSCFVHLM ALGEMWGPRL FKGWPSCFNH HQLSTAAEMT SLPTKIALPP
101: KRVYVNNGYL MVSCNGGLNQ MRAAICDMVT VARYMNVTLI VPELDKTSFW NDPSEFKDIF DVDHFISSLR DEVRILKELP PRLKKRVELG VYHEMPPISW
201: SNMSYYQNQI LPLVKKHKVL HLNRTDTRLA NNGLPVEVQK LRCRVNFNGL KFTPQIEELG RRVVKILREK GPFLVLHLRY EMDMLAFSGC SHGCNPEEEE
301: ELTRMRYAYP WWKEKVINSE LKRKDGLCPL TPEETALTLT ALGIDRNVQI YIAAGEIYGG QRRMKALTDA FPNVVRKETL LESSDLDFCR NHSSQMAALD
401: YLVALESDIF VPTNDGNMAR VVEGHRRFLG FKKTIQLNRR FLVKLIDEYT EGLLSWDVFS STVKAFHSTR MGSPKRRLVI PNRPKEEDYF YANPQECLQL
501: LDEPLRVI

Arabidopsis Description

OFUT34O-fucosyltransferase 34 [Source:UniProtKB/Swiss-Prot;Acc:Q4V398]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.