Factsheet for PGSC0003DMT400072871

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

nucleus 1
extracellular 3
golgi 3
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	97.43	75.35
KRG89556	Soybean	mitochondrion, plastid	60.41	65.28
CDY04145	Canola	cytosol	60.67	64.31
AT1G14020.1	Thale cress	cytosol, endoplasmic reticulum, golgi	78.92	61.52
KRH50557	Soybean	cytosol	78.66	61.32
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	77.38	60.44
Bra016714.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	77.38	60.44
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	77.12	60.12
KRH70785	Soybean	cytosol, nucleus, vacuole	77.89	59.88
KRH74924	Soybean	cytosol	77.89	59.88
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	72.24	59.03
EER92792	Sorghum	endoplasmic reticulum, golgi	67.87	57.64
TraesCS4A01G018000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	69.67	57.54
HORVU4Hr1G074960.11	Barley	endoplasmic reticulum, golgi, plasma membrane	68.89	57.14
TraesCS4D01G284800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	69.15	57.11
TraesCS4B01G286100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	69.15	57.11
GSMUA_Achr8P16870_001	Banana	endoplasmic reticulum, plasma membrane, plastid	71.72	57.06
Zm00001d048323_P001	Maize	endoplasmic reticulum, golgi, vacuole	66.32	56.33
AT2G03280.2	Thale cress	cytosol, endoplasmic reticulum, golgi	73.26	56.1
Os03t0169000-01	Rice	endoplasmic reticulum, golgi, vacuole	67.1	56.01
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	64.27	54.23
PGSC0003DMT400010442	Potato	golgi	64.78	51.01
PGSC0003DMT400063300	Potato	cytosol	64.27	50.1
PGSC0003DMT400006095	Potato	cytosol	64.27	50.0
Zm00001d027842_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	66.32	47.51
PGSC0003DMT400045812	Potato	cytosol	38.56	44.78
Bra017390.1-P	Field mustard	nucleus	73.01	41.7
PGSC0003DMT400079224	Potato	endoplasmic reticulum, golgi, plasma membrane	46.79	34.27
PGSC0003DMT400036338	Potato	cytosol, golgi, mitochondrion	44.47	32.34
PGSC0003DMT400043331	Potato	extracellular	42.67	30.63
PGSC0003DMT400048017	Potato	golgi	41.65	29.72
PGSC0003DMT400011606	Potato	golgi	40.62	29.64
PGSC0003DMT400030987	Potato	mitochondrion	39.85	28.7
PGSC0003DMT400028801	Potato	plastid	46.53	28.24
PGSC0003DMT400075381	Potato	golgi	42.93	28.16
PGSC0003DMT400052382	Potato	plastid	45.76	27.73
PGSC0003DMT400012157	Potato	golgi, plastid, vacuole	41.13	27.16
PGSC0003DMT400079216	Potato	nucleus, plastid	7.2	20.59
PGSC0003DMT400009656	Potato	nucleus, plastid	7.2	20.59
PGSC0003DMT400043254	Potato	nucleus, plastid	7.2	20.59
PGSC0003DMT400041662	Potato	nucleus, plastid	7.2	20.59

Protein Annotations

MapMan:21.3.2.1.1	Gene3D:3.40.50.11350	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757
UniProt:M1CR38	PFAM:PF10250	EnsemblPlantsGene:PGSC0003DMG400028347	PGSC:PGSC0003DMG400028347	EnsemblPlants:PGSC0003DMT400072871	PIRSF:PIRSF009360
PANTHER:PTHR31741	PANTHER:PTHR31741:SF3	UniParc:UPI00029559A9	:	:	:

Description

Axi 1 protein from Nicotiana tabacum [Source:PGSC_GENE;Acc:PGSC0003DMG400028347]

Coordinates

chr5:-:70562..74866

Molecular Weight (calculated)

45186.5 Da

IEP (calculated)

8.065

GRAVY (calculated)

-0.406

Length

389 amino acids

Sequence
(BLAST)

001: MVTIARLLNL TLVVPELDKT SFWADPSNFD DIFDVRHFID SLRDEVRIIK RLPKRFSRRY GYQLLEMPPV SWSNEKYYLQ QILPLFSKHQ VIHFNRTDTR
101: LANNGIPLEL QKLRCRVNFQ ALKFTPDIEA LGEKLVRMLQ ERGPFVALHL RYEMDMLAFS GCTHGCTEEE AEELKRLRYA FPWWREKEIV SEEKRSQGLC
201: PLTPEEAALI LQALGFDKDI QIYIASGDIY GGERRLASLR AAFPKIVKKD MLLKPGELQH FQNHSSQMAA LDFIVSTASN VFVPTYDGNM AKVVEGHRRY
301: LGFKKTIRLY RKKLVELLDL HQNGTLTWDE FTATVRQSHE GRMGQLARRR VIADKPKEED YFYANPQECL CESKTCDDLF GPDNSTAVQ

Best Arabidopsis Sequence Match ( AT1G14020.1 )
(BLAST)

001: MEVRSESNIT QARSDKLPLP PAVPKPRVQV WFVRVCSSIL VWTCLVQLFA AGELWHSRIF TGLTNQISRF SAPVEPVPLP PPLPPPRNYT SNGILLVSCN
101: GGLNQMRSAI CDMVTVARLL NLTLVVPELD KTSFWADPSG FEDIFDVRHF IDSLRDEVRI LRRLPKRFSR KYGYQMFEMP PVSWSDEKYY LKQVLPLFSK
201: HKVVHFNRTD TRLANNGLPL SLQWLRCRVN FQGLKFTPQL EALGSKLVRI LQQRGPFVAL HLRYEMDMLA FSGCTHGCTE EEAEELKKMR YTYPWWREKE
301: IVSEERRAQG LCPLTPEEVA LVLKALGFEK NTQIYIAAGE IYGSEHRLSV LREAFPRIVK KEMLLESAEL QQFQNHSSQM AALDFMVSVA SNTFIPTYDG
401: NMAKVVEGHR RYLGYKKTIL LDRKRLVELL DLHHNKTLTW DQFAVAVKEA HERRAGAPTH RRVISDKPKE EDYFYANPQE CLCEGTNCHD LFGHRNLTH

Arabidopsis Description

OFUT3O-fucosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ51]
SUBAcon: [cytosol,golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.