Factsheet for TraesCS4A01G018000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G284800.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	97.66	97.66
TraesCS4B01G286100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	96.82	96.82
HORVU4Hr1G074960.11	Barley	endoplasmic reticulum, golgi, plasma membrane	95.33	95.74
EER92792	Sorghum	endoplasmic reticulum, golgi	85.14	87.55
Os03t0169000-01	Rice	endoplasmic reticulum, golgi, vacuole	84.5	85.41
Zm00001d048323_P001	Maize	endoplasmic reticulum, golgi, vacuole	82.8	85.15
Zm00001d027842_P003	Maize	endoplasmic reticulum, golgi, plasma membrane	82.59	71.64
PGSC0003DMT400072871	Potato	cytosol, extracellular	57.54	69.67
Solyc01g010930.2.1	Tomato	cytosol, extracellular	39.07	68.91
CDY04145	Canola	cytosol	50.11	64.31
GSMUA_Achr8P16870_001	Banana	endoplasmic reticulum, plasma membrane, plastid	64.97	62.58
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	66.24	62.03
AT1G14020.1	Thale cress	cytosol, endoplasmic reticulum, golgi	64.97	61.32
CDY62211	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	64.54	60.92
CDX96871	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	64.33	60.84
Bra016714.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	64.33	60.84
KRH50557	Soybean	cytosol	64.12	60.52
KRH70785	Soybean	cytosol, nucleus, vacuole	63.48	59.09
KRH74924	Soybean	cytosol	63.48	59.09
KRG89556	Soybean	mitochondrion, plastid	45.01	58.89
CDY64492	Canola	cytosol, endoplasmic reticulum, golgi, plastid	59.45	58.82
TraesCS3A01G095200.2	Wheat	mitochondrion	59.66	57.0
TraesCS5A01G251600.3	Wheat	golgi	59.87	56.97
AT2G03280.2	Thale cress	cytosol, endoplasmic reticulum, golgi	60.93	56.5
TraesCS4A01G131200.2	Wheat	mitochondrion, plastid	59.24	56.02
CDY36425	Canola	cytosol, endoplasmic reticulum, plasma membrane	53.29	54.45
TraesCS7A01G213300.1	Wheat	mitochondrion, plastid	56.26	53.11
TraesCS6A01G287900.1	Wheat	mitochondrion	56.05	53.01
Bra017390.1-P	Field mustard	nucleus	58.39	40.38
TraesCS2A01G355500.1	Wheat	mitochondrion	41.83	40.37
TraesCS7A01G177400.1	Wheat	golgi, mitochondrion, vacuole	42.68	38.07
TraesCS3A01G365800.1	Wheat	plastid	41.83	35.43
TraesCS2A01G414000.1	Wheat	plastid	36.52	33.99
TraesCS5A01G209100.1	Wheat	plastid	43.1	32.07
TraesCS1A01G279800.1	Wheat	plastid	39.92	30.92
TraesCS5A01G347600.2	Wheat	golgi	36.31	29.18
TraesCS7A01G276200.2	Wheat	golgi	37.16	29.07
TraesCS2A01G405000.3	Wheat	golgi	36.73	27.64
TraesCS2A01G318900.1	Wheat	nucleus, plastid	7.43	25.74
TraesCS7A01G067800.1	Wheat	nucleus, plastid	7.43	25.74
TraesCS7A01G158300.1	Wheat	nucleus, plastid	7.43	25.74
TraesCS4A01G423800.1	Wheat	nucleus, plastid	7.43	25.74
TraesCS4A01G421900.1	Wheat	nucleus, plastid	7.43	25.74
TraesCS7A01G442900.1	Wheat	nucleus, plastid	7.43	25.74
TraesCS4A01G421500.1	Wheat	nucleus, plastid	7.43	25.74

Protein Annotations

EnsemblPlants:TraesCS4A01G018000.1	EnsemblPlantsGene:TraesCS4A01G018000	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	PANTHER:PTHR31741	PANTHER:PTHR31741:SF3
PFAM:PF10250	PIRSF:PIRSF009360	SEG:seg	SignalP:SignalP-TM	TIGR:cd11299	TMHMM:TMhelix
MapMan:21.3.2.1.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:11808307..11811296

Molecular Weight (calculated)

53514.9 Da

IEP (calculated)

9.795

GRAVY (calculated)

-0.317

Length

471 amino acids

Sequence
(BLAST)

001: MARSRPRFWL VAGCVALLLW ASVAQLVAVG RLLSLFGLAG SAPGPSPPPS SPPPPPPPPR IYKSNGYLKI SCNGGLNQMR SEICDMVAVA RLLNLTMVVP
101: ELDKRSFWAD QSNFGDIFDV RHFITSLRDE VRIVKRLPKR FGPTDSGIML DMSPVSWSDE KYYLHQILPL FSKYKVIHFN KTDARLANNG ISTELQLVRC
201: RVNFRALKFT PQIEALGNKL VQKLRDKGSF VALHLRYEMD MLAFSGCNHG LNPEEAEELK RMRYAYPWWR DKEIDSKTKR SEGLCPLTPE ETSLVLKALG
301: FEKDTLIYIA AGEIYGGEKR LKPLRAAFPK LVRKEMLLDS EPLRQFQNHS SQMAALDFIV STASDVFLPT YDGNMAKLVE GHRRFLGFRK SVLPDRRKLV
401: ELIDLYNNKT ISWENFTSSV QEVHRGRVVQ PSCRRKLENK PKEEDYFYAN PHECLANSSL CSGSKDTVTV R

Best Arabidopsis Sequence Match ( AT1G14020.1 )
(BLAST)

001: MEVRSESNIT QARSDKLPLP PAVPKPRVQV WFVRVCSSIL VWTCLVQLFA AGELWHSRIF TGLTNQISRF SAPVEPVPLP PPLPPPRNYT SNGILLVSCN
101: GGLNQMRSAI CDMVTVARLL NLTLVVPELD KTSFWADPSG FEDIFDVRHF IDSLRDEVRI LRRLPKRFSR KYGYQMFEMP PVSWSDEKYY LKQVLPLFSK
201: HKVVHFNRTD TRLANNGLPL SLQWLRCRVN FQGLKFTPQL EALGSKLVRI LQQRGPFVAL HLRYEMDMLA FSGCTHGCTE EEAEELKKMR YTYPWWREKE
301: IVSEERRAQG LCPLTPEEVA LVLKALGFEK NTQIYIAAGE IYGSEHRLSV LREAFPRIVK KEMLLESAEL QQFQNHSSQM AALDFMVSVA SNTFIPTYDG
401: NMAKVVEGHR RYLGYKKTIL LDRKRLVELL DLHHNKTLTW DQFAVAVKEA HERRAGAPTH RRVISDKPKE EDYFYANPQE CLCEGTNCHD LFGHRNLTH

Arabidopsis Description

OFUT3O-fucosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ51]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.