Factsheet for TraesCS7A01G158300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G421500.1	Wheat	nucleus, plastid	100.0	100.0
Zm00001d045475_P001	Maize	nucleus, plastid	100.0	100.0
Zm00001d036036_P001	Maize	plastid	100.0	100.0
TraesCS7D01G158900.1	Wheat	nucleus, plastid	100.0	100.0
TraesCS7B01G341600.1	Wheat	nucleus, plastid	100.0	100.0
TraesCS7A01G442900.1	Wheat	nucleus, plastid	100.0	100.0
TraesCS7A01G067800.1	Wheat	nucleus, plastid	100.0	100.0
TraesCS4A01G423800.1	Wheat	nucleus, plastid	100.0	100.0
TraesCS4A01G421900.1	Wheat	nucleus, plastid	100.0	100.0
Bra003745.1-P	Field mustard	nucleus, plastid	100.0	100.0
KRG97549	Soybean	nucleus, plastid	100.0	100.0
Solyc04g074580.1.1	Tomato	nucleus, plastid	100.0	100.0
PGSC0003DMT400079216	Potato	nucleus, plastid	100.0	100.0
Solyc11g010230.1.1	Tomato	nucleus	100.0	100.0
KXG26432	Sorghum	nucleus, plastid	100.0	100.0
TraesCS2A01G318900.1	Wheat	nucleus, plastid	100.0	100.0
HORVU7Hr1G100690.1	Barley	nucleus, plastid	100.0	100.0
TraesCS2A01G355500.1	Wheat	mitochondrion	28.68	7.99
TraesCS4A01G018000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion	25.74	7.43
TraesCS5A01G251600.3	Wheat	golgi	25.74	7.07
TraesCS4A01G131200.2	Wheat	mitochondrion, plastid	25.74	7.03
TraesCS3A01G095200.2	Wheat	mitochondrion	25.0	6.9
TraesCS6A01G287900.1	Wheat	mitochondrion	25.0	6.83
TraesCS7A01G213300.1	Wheat	mitochondrion, plastid	25.0	6.81
TraesCS7A01G177400.1	Wheat	golgi, mitochondrion, vacuole	25.74	6.63
TraesCS1A01G279800.1	Wheat	plastid	27.94	6.25
TraesCS3A01G365800.1	Wheat	plastid	24.26	5.94
TraesCS2A01G414000.1	Wheat	plastid	21.32	5.73
TraesCS5A01G209100.1	Wheat	plastid	24.26	5.21
TraesCS7A01G276200.2	Wheat	golgi	22.06	4.98
TraesCS2A01G405000.3	Wheat	golgi	22.06	4.79
TraesCS5A01G347600.2	Wheat	golgi	20.59	4.78

Protein Annotations

Gene3D:1.10.20.10	MapMan:12.1.4	GO:GO:0000786	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0046982
InterPro:Histone-fold	InterPro:Histone_H2A/H2B/H3	InterPro:Histone_H3/CENP-A	InterPro:IPR009072	PFAM:PF00125	PRINTS:PR00622
ScanProsite:PS00322	ScanProsite:PS00959	PANTHER:PTHR11426	PANTHER:PTHR11426:SF163	SMART:SM00428	SUPFAM:SSF47113
EnsemblPlantsGene:TraesCS7A01G158300	EnsemblPlants:TraesCS7A01G158300.1	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:113370937..113371639

Molecular Weight (calculated)

15407.0 Da

IEP (calculated)

11.739

GRAVY (calculated)

-0.602

Length

136 amino acids

Sequence
(BLAST)

001: MARTKQTARK STGGKAPRKQ LATKAARKSA PTTGGVKKPH RYRPGTVALR EIRKYQKSTE LLIRKLPFQR LVREIAQDFK TDLRFQSHAV LALQEAAEAY
101: LVGLFEDTNL CAIHAKRVTI MPKDIQLARR IRGERA

Best Arabidopsis Sequence Match ( AT4G40030.3 )
(BLAST)

001: MARTKQTARK STGGKAPRKQ LATKAARKSA PTTGGVKKPH RYRPGTVALR EIRKYQKSTE LLIRKLPFQR LVREIAQDFK TDLRFQSHAV LALQEAAEAY
101: LVGLFEDTNL CAIHAKRVTI MPKDIQLARR IRGERA

Arabidopsis Description

Histone superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MRL0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.