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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • nucleus 4
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
 extracellular: 20408568
plastid: 22065420
mitochondrion: 27297264
plasma membrane: 27341663
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
msms PMID: 22065420 doi
W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk
Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G100690.1 Barley nucleus, plastid 100.0 100.0
Zm00001d045475_P001 Maize nucleus, plastid 100.0 100.0
Zm00001d029394_P003 Maize nucleus, plastid 100.0 100.0
Zm00001d016908_P006 Maize nucleus, plastid 100.0 100.0
Bra003745.1-P Field mustard nucleus, plastid 100.0 100.0
Solyc04g074580.1.1 Tomato nucleus, plastid 100.0 100.0
Solyc11g010230.1.1 Tomato nucleus 100.0 100.0
TraesCS7A01G158300.1 Wheat nucleus, plastid 100.0 100.0
Zm00001d003493_P001 Maize nucleus, plastid 99.26 99.26
Zm00001d041823_P003 Maize mitochondrion, vacuole 28.68 7.98
Zm00001d039702_P001 Maize plastid 25.74 7.43
Zm00001d048323_P001 Maize endoplasmic reticulum, golgi, vacuole 25.0 7.42
Zm00001d017906_P003 Maize plastid 26.47 7.16
Zm00001d045763_P002 Maize golgi, plastid 25.74 7.01
Zm00001d029008_P001 Maize mitochondrion 25.74 7.01
Zm00001d037367_P001 Maize plastid 25.74 7.0
Zm00001d008692_P001 Maize mitochondrion 25.74 6.99
Zm00001d037199_P001 Maize mitochondrion 26.47 6.73
Zm00001d027842_P003 Maize endoplasmic reticulum, golgi, plasma membrane 25.0 6.26
Zm00001d012362_P001 Maize plastid 25.0 6.24
Zm00001d002742_P002 Maize endoplasmic reticulum, peroxisome, plasma membrane, plastid 21.32 5.79
Zm00001d010112_P001 Maize cytosol, plastid 22.79 5.36
Zm00001d050483_P002 Maize golgi 22.06 5.18
Zm00001d002668_P004 Maize golgi 22.06 5.15
Zm00001d038263_P001 Maize plastid 21.32 5.06
Zm00001d021448_P002 Maize mitochondrion 18.38 4.21
Zm00001d020643_P002 Maize plasma membrane, plastid 19.12 3.38
Protein Annotations
Gene3D:1.10.20.10EntrezGene:100192746EntrezGene:100194139EntrezGene:103627323EntrezGene:103638137MapMan:12.1.4
ProteinID:AQK71917.1ProteinID:AQK71918.1ProteinID:AQK71919.1ProteinID:AQK71920.1ProteinID:AQK71921.1ProteinID:AQK71922.1
ProteinID:AQK80197.1ProteinID:AQL02337.1UniProt:B4FCH2EMBL:BT034810EMBL:BT042286EMBL:BT043468
EMBL:BT087344EMBL:EU952417EMBL:EU952814EMBL:EU952884EMBL:EU953487EMBL:EU958923
EMBL:EU958930EMBL:EU974018GO:GO:0000786GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005694GO:GO:0005730GO:GO:0030875GO:GO:0046982InterPro:Histone-foldInterPro:Histone_H2A/H2B/H3
InterPro:Histone_H3/CENP-AInterPro:IPR009072ProteinID:ONL98646.1ProteinID:ONL98647.1ProteinID:ONL98649.1PFAM:PF00125
PRINTS:PR00622ScanProsite:PS00322ScanProsite:PS00959PANTHER:PTHR11426PANTHER:PTHR11426:SF163SMART:SM00428
SUPFAM:SSF47113UniParc:UPI0000000067EnsemblPlantsGene:Zm00001d036036EnsemblPlants:Zm00001d036036_P001EnsemblPlants:Zm00001d036036_T001:
Description
Histone H3
Coordinates
chr6:-:67784534..67785534
Molecular Weight (calculated)
15407.0 Da
IEP (calculated)
11.739
GRAVY (calculated)
-0.602
Length
136 amino acids
Sequence
(BLAST)
001: MARTKQTARK STGGKAPRKQ LATKAARKSA PTTGGVKKPH RYRPGTVALR EIRKYQKSTE LLIRKLPFQR LVREIAQDFK TDLRFQSHAV LALQEAAEAY
101: LVGLFEDTNL CAIHAKRVTI MPKDIQLARR IRGERA
Best Arabidopsis Sequence Match ( AT4G40040.1 )
(BLAST)
001: MARTKQTARK STGGKAPRKQ LATKAARKSA PTTGGVKKPH RYRPGTVALR EIRKYQKSTE LLIRKLPFQR LVREIAQDFK TDLRFQSHAV LALQEAAEAY
101: LVGLFEDTNL CAIHAKRVTI MPKDIQLARR IRGERA
Arabidopsis Description
HTR8Histone H3.3 [Source:UniProtKB/Swiss-Prot;Acc:P59169]
SUBAcon: [nucleus,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.