Factsheet for PGSC0003DMT400036338

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, cytosol

Predictor Summary:

nucleus 1
vacuole 2
golgi 3
plastid 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	golgi
Plant-mPloc:	golgi, plastid
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g096370.2.1	Tomato	golgi, mitochondrion, nucleus	91.4	92.79
VIT_13s0019g03250.t01	Wine grape	cytosol	51.4	60.18
Os05t0451900-01	Rice	cytosol	45.05	57.38
OQU87869	Sorghum	mitochondrion	46.54	53.09
KRH73118	Soybean	mitochondrion	51.22	52.29
KRH15012	Soybean	cytosol	51.03	52.1
TraesCS3B01G397600.1	Wheat	plastid	48.41	47.09
TraesCS3A01G365800.1	Wheat	plastid	48.6	46.76
TraesCS3D01G358900.2	Wheat	plastid	48.22	46.74
PGSC0003DMT400052382	Potato	plastid	56.07	46.73
GSMUA_Achr5P28820_001	Banana	plastid	45.61	46.21
PGSC0003DMT400028801	Potato	plastid	55.14	46.02
Zm00001d038263_P001	Maize	plastid	49.16	45.9
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	49.53	45.61
Os01t0851100-02	Rice	plastid	36.07	45.09
KXG22127	Sorghum	plastid	51.4	45.01
Zm00001d012362_P001	Maize	plastid	45.79	44.95
TraesCS1B01G288800.1	Wheat	plastid	50.65	44.87
HORVU1Hr1G073150.1	Barley	plastid	49.91	44.57
PGSC0003DMT400072871	Potato	cytosol, extracellular	32.34	44.47
TraesCS1A01G279800.1	Wheat	plastid	50.47	44.41
Zm00001d010112_P001	Maize	cytosol, plastid	47.1	43.6
TraesCS1D01G279000.1	Wheat	plastid	46.17	43.33
PGSC0003DMT400045812	Potato	cytosol	26.73	42.69
PGSC0003DMT400010442	Potato	golgi	35.7	38.66
PGSC0003DMT400079224	Potato	endoplasmic reticulum, golgi, plasma membrane	37.57	37.85
PGSC0003DMT400063300	Potato	cytosol	34.77	37.27
PGSC0003DMT400006095	Potato	cytosol	34.39	36.8
PGSC0003DMT400011606	Potato	golgi	30.65	30.77
PGSC0003DMT400030987	Potato	mitochondrion	29.35	29.07
PGSC0003DMT400048017	Potato	golgi	28.97	28.44
PGSC0003DMT400012157	Potato	golgi, plastid, vacuole	29.53	26.83
PGSC0003DMT400075381	Potato	golgi	29.72	26.81
PGSC0003DMT400043331	Potato	extracellular	26.92	26.57
PGSC0003DMT400009656	Potato	nucleus, plastid	6.36	25.0
PGSC0003DMT400079216	Potato	nucleus, plastid	6.36	25.0
PGSC0003DMT400043254	Potato	nucleus, plastid	6.36	25.0
PGSC0003DMT400041662	Potato	nucleus, plastid	6.36	25.0

Protein Annotations

MapMan:35.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	UniProt:M1B3I0	PFAM:PF10250	EnsemblPlantsGene:PGSC0003DMG400013980	PGSC:PGSC0003DMG400013980
EnsemblPlants:PGSC0003DMT400036338	PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF4	TMHMM:TMhelix	UniParc:UPI0002948409

Description

Axi 1 protein from Nicotiana tabacum [Source:PGSC_GENE;Acc:PGSC0003DMG400013980]

Coordinates

chr3:-:34495920..34498881

Molecular Weight (calculated)

61636.8 Da

IEP (calculated)

10.104

GRAVY (calculated)

-0.444

Length

535 amino acids

Sequence
(BLAST)

001: MSNSPLATGT ITTRRRPIDS VEYVEENGNG KVNIGQHHHH RRITSSVNSL MRPGRYLSRW IFGALMLLMI STMFVKIILI HLFLRVNATM TSHHDFLQLP
101: PHVMHAQNSE IWAKLGSDKF YKCIDRSSIK TRGKSMSNGY ILVHANGGLN QMRSGISDMV AVAKLMNASL VLPMLDHKSF WTDPSEFKDI FDWQHFRKSL
201: EDDIEVLESL PPSVANVKPF LKAPVSWSKA SYYNRDILKI LKRHKVIEFT HTDSRLANNG IPDSIQKLRC HAMYEAIRFT EKIEQLGTKL VNRLKENGEP
301: YIALHLRYEK DMLAFTGCNH NLTQKEAEEL RKLRYKTKHW KEKRINGTEK RVLGLCPMTP REAAIFLESM EYPSNTKICI VAGDIFGQNG LKALQERYPN
401: VYYHSNLATE QELKPFMQRH NQLAALDYIL ALHADVFLYT YDGNMAKAVR GHRLFQGFWK TINPDKQNFV RLMDGMDNKK LSWKEFATQV RGLHVNRTGA
501: PNARVVGHSP KLEENFYANP FPGCICLKPK HEKSR

Best Arabidopsis Sequence Match ( AT1G14020.1 )
(BLAST)

001: MEVRSESNIT QARSDKLPLP PAVPKPRVQV WFVRVCSSIL VWTCLVQLFA AGELWHSRIF TGLTNQISRF SAPVEPVPLP PPLPPPRNYT SNGILLVSCN
101: GGLNQMRSAI CDMVTVARLL NLTLVVPELD KTSFWADPSG FEDIFDVRHF IDSLRDEVRI LRRLPKRFSR KYGYQMFEMP PVSWSDEKYY LKQVLPLFSK
201: HKVVHFNRTD TRLANNGLPL SLQWLRCRVN FQGLKFTPQL EALGSKLVRI LQQRGPFVAL HLRYEMDMLA FSGCTHGCTE EEAEELKKMR YTYPWWREKE
301: IVSEERRAQG LCPLTPEEVA LVLKALGFEK NTQIYIAAGE IYGSEHRLSV LREAFPRIVK KEMLLESAEL QQFQNHSSQM AALDFMVSVA SNTFIPTYDG
401: NMAKVVEGHR RYLGYKKTIL LDRKRLVELL DLHHNKTLTW DQFAVAVKEA HERRAGAPTH RRVISDKPKE EDYFYANPQE CLCEGTNCHD LFGHRNLTH

Arabidopsis Description

OFUT3O-fucosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ51]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.