Factsheet for PGSC0003DMT400010442

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
golgi 3
plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g069380.2.1	Tomato	mitochondrion	97.77	97.77
PGSC0003DMT400063300	Potato	cytosol	87.65	86.77
PGSC0003DMT400006095	Potato	cytosol	83.81	82.8
KRH03183	Soybean	cytosol	59.51	80.33
VIT_17s0000g04810.t01	Wine grape	golgi	81.98	78.79
GSMUA_Achr9P18530_001	Banana	endoplasmic reticulum, golgi	70.04	75.88
TraesCS7A01G213300.1	Wheat	mitochondrion, plastid	76.11	75.35
TraesCS7B01G120300.1	Wheat	mitochondrion, plastid	76.11	75.35
KRH56756	Soybean	golgi, peroxisome, plastid	78.54	75.34
TraesCS7D01G215200.1	Wheat	mitochondrion, plastid	75.91	75.15
Zm00001d045763_P002	Maize	golgi, plastid	75.3	74.55
KRH54757	Soybean	cytosol	79.15	74.33
Zm00001d037367_P001	Maize	plastid	75.1	74.2
GSMUA_Achr4P09700_001	Banana	cytosol	75.91	74.11
KRH63160	Soybean	cytosol	78.34	74.0
HORVU7Hr1G043230.10	Barley	golgi, plastid	75.91	73.96
TraesCS6B01G317300.1	Wheat	golgi, mitochondrion, plastid	73.28	73.88
Os06t0284200-02	Rice	mitochondrion	75.3	73.23
EER89610	Sorghum	plastid	75.71	72.9
TraesCS6D01G268600.1	Wheat	mitochondrion	73.28	72.69
TraesCS6A01G287900.1	Wheat	mitochondrion	73.28	72.69
GSMUA_Achr3P10660_001	Banana	cytosol, golgi, plasma membrane	74.9	72.27
OQU85485	Sorghum	mitochondrion	72.87	72.14
GSMUA_Achr7P20110_001	Banana	cytosol	73.08	71.91
GSMUA_Achr10P...	Banana	cytosol	73.48	71.18
Os02t0726500-01	Rice	golgi, mitochondrion, peroxisome, plastid	73.28	70.98
Zm00001d017906_P003	Maize	plastid	72.06	70.78
TraesCS5A01G251600.3	Wheat	golgi	68.22	68.08
HORVU5Hr1G070810.1	Barley	golgi	68.22	67.27
TraesCS5D01G259500.1	Wheat	golgi	68.42	67.2
TraesCS5B01G249700.2	Wheat	golgi	68.02	67.07
EER99050	Sorghum	golgi, mitochondrion, plastid	66.8	66.27
PGSC0003DMT400072871	Potato	cytosol, extracellular	51.01	64.78
HORVU6Hr1G072260.25	Barley	cytosol	67.21	64.59
PGSC0003DMT400045812	Potato	cytosol	31.58	46.57
PGSC0003DMT400079224	Potato	endoplasmic reticulum, golgi, plasma membrane	42.71	39.74
PGSC0003DMT400036338	Potato	cytosol, golgi, mitochondrion	38.66	35.7
PGSC0003DMT400011606	Potato	golgi	35.02	32.46
PGSC0003DMT400048017	Potato	golgi	35.63	32.29
PGSC0003DMT400030987	Potato	mitochondrion	35.22	32.22
PGSC0003DMT400028801	Potato	plastid	41.3	31.83
PGSC0003DMT400052382	Potato	plastid	41.3	31.78
PGSC0003DMT400043331	Potato	extracellular	34.21	31.18
PGSC0003DMT400075381	Potato	golgi	36.64	30.52
PGSC0003DMT400012157	Potato	golgi, plastid, vacuole	36.23	30.39
PGSC0003DMT400043254	Potato	nucleus, plastid	7.89	28.68
PGSC0003DMT400009656	Potato	nucleus, plastid	7.89	28.68
PGSC0003DMT400041662	Potato	nucleus, plastid	7.89	28.68
PGSC0003DMT400079216	Potato	nucleus, plastid	7.89	28.68

Protein Annotations

EntrezGene:102601962	MapMan:21.3.2.1.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005975	GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757
UniProt:M0ZY23	PFAM:PF10250	EnsemblPlantsGene:PGSC0003DMG400004078	PGSC:PGSC0003DMG400004078	EnsemblPlants:PGSC0003DMT400010442	PIRSF:PIRSF009360
PANTHER:PTHR31741	PANTHER:PTHR31741:SF5	TMHMM:TMhelix	UniParc:UPI000294AEDD	RefSeq:XP_006354743.1	SEG:seg

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400004078]

Coordinates

chr6:-:51146950..51150905

Molecular Weight (calculated)

56797.9 Da

IEP (calculated)

7.960

GRAVY (calculated)

-0.267

Length

494 amino acids

Sequence
(BLAST)

001: MGLKVTALAE SRLEKLKSSM SSKSRMKLWM IRITTSVLIW ICLVQLTILG ETWGPRVLKG WPPCPSHESA AVLAVKSSSE VPARVLPPKR VYRNNGYLMV
101: SCNGGLNQMR SAICDMVAIA RYLNVTLIVP ELDKTSFWAD SSEFQDIFDV DHFIMSLRDE VRILKELPPR LKRRVELGVT HTMAPISWSD ISYYHNQILP
201: LIQQYKVVHL NRTDARLANN GLPMEIQKLR CRVNFGALKF TPQIEELGRK VVRILRQEGP FMVLHLRYEM DMLAFSGCTQ GCKQEEVEEL TRMRYAYPWW
301: KEKIINSDLK RRDGLCPLTP EETALTLRAL DIDPSIQVYI AAGEIYGGER RMASLAAAYP NLVRKETLLE SSELRFFQNH SSQMAALDYL VSLESDIFVP
401: TYDGNMAKVV EGHRRYLGYK KTILLDRKHL VDLIDQHNAG SLTWDEFSTA VKEAHAERMG NPTKRLVIQD RPKEEDYFYS NPWECLEPSY DDEL

Best Arabidopsis Sequence Match ( AT5G15740.1 )
(BLAST)

001: MCKMEKFLYH RKLWEMNVKL LGESKVEKLK NSFVSRPRMS LWMIRAVTVL LLWSCFVHLM ALGEMWGPRL FKGWPSCFNH HQLSTAAEMT SLPTKIALPP
101: KRVYVNNGYL MVSCNGGLNQ MRAAICDMVT VARYMNVTLI VPELDKTSFW NDPSEFKDIF DVDHFISSLR DEVRILKELP PRLKKRVELG VYHEMPPISW
201: SNMSYYQNQI LPLVKKHKVL HLNRTDTRLA NNGLPVEVQK LRCRVNFNGL KFTPQIEELG RRVVKILREK GPFLVLHLRY EMDMLAFSGC SHGCNPEEEE
301: ELTRMRYAYP WWKEKVINSE LKRKDGLCPL TPEETALTLT ALGIDRNVQI YIAAGEIYGG QRRMKALTDA FPNVVRKETL LESSDLDFCR NHSSQMAALD
401: YLVALESDIF VPTNDGNMAR VVEGHRRFLG FKKTIQLNRR FLVKLIDEYT EGLLSWDVFS STVKAFHSTR MGSPKRRLVI PNRPKEEDYF YANPQECLQL
501: LDEPLRVI

Arabidopsis Description

OFUT34O-fucosyltransferase 34 [Source:UniProtKB/Swiss-Prot;Acc:Q4V398]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.