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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • mitochondrion 2
  • golgi 3
  • extracellular 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G347600.2 Wheat golgi 93.09 91.98
TraesCS5B01G348700.1 Wheat golgi 92.06 91.9
TraesCS5D01G353700.1 Wheat golgi 91.71 91.55
OQU89872 Sorghum endoplasmic reticulum, golgi, plasma membrane 76.51 74.45
Zm00001d021448_P002 Maize mitochondrion 75.82 73.91
GSMUA_Achr3P14740_001 Banana mitochondrion 56.82 63.03
HORVU7Hr1G058080.1 Barley plastid 68.22 60.86
CDY69289 Canola cytosol 41.62 60.86
VIT_18s0001g00100.t01 Wine grape endoplasmic reticulum, golgi, mitochondrion 58.89 59.51
KRH60950 Soybean endoplasmic reticulum 58.03 58.64
KRH51625 Soybean golgi, mitochondrion, vacuole 57.69 58.09
AT1G20550.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 56.13 57.62
AT1G76270.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 55.96 56.64
PGSC0003DMT400075381 Potato golgi 57.69 56.32
Solyc12g098400.1.1 Tomato unclear 51.81 56.18
Solyc12g094590.1.1 Tomato unclear 57.51 56.16
PGSC0003DMT400011606 Potato golgi 51.47 55.91
VIT_03s0038g03240.t01 Wine grape mitochondrion 56.99 55.74
KRH74090 Soybean endoplasmic reticulum, golgi, plasma membrane 53.71 55.73
CDY29524 Canola extracellular, golgi, plasma membrane 54.23 55.67
CDY31477 Canola extracellular, golgi, plasma membrane 54.23 55.67
Bra025826.1-P Field mustard extracellular, golgi, plasma membrane 54.23 55.58
Bra015771.1-P Field mustard golgi 55.61 55.42
KRH14026 Soybean golgi 54.23 55.38
CDX73250 Canola golgi 55.44 55.25
AT4G38390.1 Thale cress endoplasmic reticulum, nucleus, plasma membrane 52.5 55.17
CDX87622 Canola nucleus 53.2 54.8
PGSC0003DMT400048017 Potato golgi 51.3 54.5
Solyc01g112070.2.1 Tomato nucleus 50.95 54.43
CDY54803 Canola golgi 51.81 54.35
Bra033562.1-P Field mustard golgi 51.64 54.27
CDY64279 Canola golgi 51.64 54.17
HORVU2Hr1G096100.42 Barley mitochondrion, plastid 54.06 53.97
PGSC0003DMT400043331 Potato extracellular 48.53 51.84
HORVU2Hr1G097570.8 Barley plastid 43.52 50.2
Solyc10g074490.1.1 Tomato golgi 52.85 47.44
HORVU3Hr1G017120.2 Barley cytosol, plastid 23.66 43.63
HORVU4Hr1G051230.6 Barley endoplasmic reticulum, golgi, mitochondrion 32.64 37.65
HORVU4Hr1G074960.11 Barley endoplasmic reticulum, golgi, plasma membrane 28.67 35.39
HORVU2Hr1G086020.2 Barley mitochondrion 29.71 35.25
HORVU7Hr1G036450.20 Barley golgi 31.43 34.47
HORVU5Hr1G070810.1 Barley golgi 28.84 33.33
HORVU7Hr1G043230.10 Barley golgi, plastid 28.67 32.74
HORVU6Hr1G072260.25 Barley cytosol 27.98 31.52
HORVU1Hr1G073150.1 Barley plastid 30.05 29.05
HORVU5Hr1G061540.6 Barley nucleus, plasma membrane, plastid 29.53 26.84
HORVU7Hr1G033030.1 Barley extracellular 4.66 19.85
HORVU7Hr1G100690.1 Barley nucleus, plastid 4.66 19.85
Protein Annotations
MapMan:35.1UniProt:A0A287S4J0InterPro:FucosylTrfase_plnInterPro:GDP-Fuc_O-FucTrfaseGO:GO:0003674GO:GO:0003824
GO:GO:0005975GO:GO:0006004GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757
EnsemblPlantsGene:HORVU5Hr1G086560EnsemblPlants:HORVU5Hr1G086560.1PFAM:PF10250PIRSF:PIRSF009360PANTHER:PTHR31818PANTHER:PTHR31818:SF2
SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000B467B8CSEG:seg::
Description
No Description!
Coordinates
chrchr5H:+:576898728..576903441
Molecular Weight (calculated)
64565.8 Da
IEP (calculated)
7.774
GRAVY (calculated)
-0.494
Length
579 amino acids
Sequence
(BLAST)
001: MGHPRRRAHP RRGALLPAVA ALLLLFLAVS LLSIAISAPP LADRHPGLSR RSLRRPPTSR RTARDDLWGS ELASNFYGCS NSSGKFLDSS VATQPDRFLI
101: IVTSGGLNQQ RTGIVDAVVA ARILNATLVV PKLDQTSFWK DSSNFSEIFD IDWFISFLAK DIKIIKEPPE KGGKAVRPYK MRVPRKCTPQ CYLKRVLPAL
201: LKKHVIRMTK YDYRLSNKLE TDLQKLRCRV NYHALRFTDP IQDLGEKLIQ RMREKSKYFI ALHLRFESDM LAFSGCYYGG GEKERRDLGA IRKRWKTLHT
301: SNPEKGRRQG RCPLTPEEVG LLLRALGYGS DVHIYAASGE IYGGEETLAP LKALFPNYHT KESLSSKDEL TPFLAHSSRM AAIDFIVCDG SDAFVTNNNG
401: NMAKILAGRR RYFGHRRTIR PNAKQLYPLF TNRGNMSWGE FSSQVRVVQK GFMGDPMEVM PGRGEFHAYP AACICEKADE NKSSPGSNQE IINHTGVRKA
501: IGEPAYPVYT DEEADGSDAE DDPTGTGEEE MITEDDPATG EEAVAEDDPS ATEEAIDTEA DDDSSGRQEG LELEAILSD
Best Arabidopsis Sequence Match ( AT1G20550.1 )
(BLAST)
001: MAFQRRRNNY YNRLRRLLPF ICAVSGALLI LFALLSILSP PPDDSDRRIS KHINYGANDE KKNTPVVFTV PRGGGRSDRD IWRSWNAEFF YGCCNASSKF
101: PNAKAITRND RYLAIATSGG LNQQRTGIVD AVVAARILNA TLVIPKLDQK SYWKDASDFS NIFDVDWFMS FLSKDVKIIE KLPQKGGQTW SPRRMRVPRK
201: CNEKCYINRV LPVLQKRHAV QLNKFDYRLS NKLRDDLQKL RCRVNYHALK FTDPILEMGN ELVRRMRKRS KHFIALHLRF EPDMLAFSGC YYGGGEKEKK
301: ELGTIRRRWK TLHVNNPEKQ RRQGRCPLTP EEVGLMLRAL GYGSDVHIYV ASGEVYGGEK SLAPLKALFP HFYSKDTIAT KMELKPFSSY SSRMAALDFL
401: VCDESDVFVT NNNGNMARIL AGRRRYFGHK PTIRPNAKKL YKLFMSKENT TWEEFASRVR TFQKGFMGEP KEVRAGKGEF HENPAACICE DTDAKVKAGK
501: MDSRKFGKKE QKEDEDAELS SSETDYEEDQ TDLQDRGLYN GTRLDYDDAL SVSEEPELEE MLSD
Arabidopsis Description
OFUT6O-fucosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HSU3]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.