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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033562.1-P Field mustard golgi 97.98 70.42
CDY54803 Canola golgi 96.97 69.57
CDY64279 Canola golgi 96.72 69.38
AT4G38390.1 Thale cress endoplasmic reticulum, nucleus, plasma membrane 83.08 59.71
GSMUA_Achr8P13270_001 Banana endoplasmic reticulum, golgi, plasma membrane 59.09 52.82
GSMUA_Achr3P14740_001 Banana mitochondrion 64.65 49.04
PGSC0003DMT400043331 Potato extracellular 63.64 46.49
PGSC0003DMT400048017 Potato golgi 62.37 45.32
Solyc01g112070.2.1 Tomato nucleus 61.62 45.02
KRH74090 Soybean endoplasmic reticulum, golgi, plasma membrane 62.12 44.09
Os04t0563000-01 Rice endoplasmic reticulum, golgi 61.36 44.02
CDY31477 Canola extracellular, golgi, plasma membrane 62.37 43.79
CDY29524 Canola extracellular, golgi, plasma membrane 62.12 43.62
VIT_03s0038g03240.t01 Wine grape mitochondrion 64.9 43.41
KRH14026 Soybean golgi 62.12 43.39
CDX87622 Canola nucleus 60.86 42.88
Os08t0554050-01 Rice golgi 64.65 42.88
KXG26900 Sorghum golgi 62.37 42.66
EES15207 Sorghum golgi 62.37 42.66
Zm00001d002668_P004 Maize golgi 62.12 42.27
TraesCS2D01G401900.1 Wheat golgi 61.11 42.23
TraesCS2B01G423100.1 Wheat golgi 60.86 42.13
TraesCS5B01G348700.1 Wheat golgi 61.62 42.07
Zm00001d050483_P002 Maize golgi 61.11 41.8
TraesCS5D01G353700.1 Wheat golgi 61.11 41.72
HORVU5Hr1G086560.1 Barley golgi 60.86 41.62
HORVU2Hr1G096100.42 Barley mitochondrion, plastid 60.86 41.55
TraesCS7D01G276100.1 Wheat golgi 62.88 41.5
TraesCS5A01G347600.2 Wheat golgi 61.36 41.47
CDX73250 Canola golgi 60.61 41.31
TraesCS7B01G174000.1 Wheat golgi 62.63 41.06
TraesCS7A01G276200.2 Wheat golgi 62.12 40.86
GSMUA_Achr5P19070_001 Banana endoplasmic reticulum, golgi, plasma membrane 62.12 40.46
CDY53645 Canola mitochondrion 53.79 40.19
Zm00001d021448_P002 Maize mitochondrion 59.85 39.9
CDY50845 Canola cytosol, endoplasmic reticulum, golgi, plastid 53.54 39.85
OQU89872 Sorghum endoplasmic reticulum, golgi, plasma membrane 59.85 39.83
CDX90501 Canola mitochondrion 54.29 38.88
CDY40517 Canola mitochondrion 54.04 38.84
CDY32271 Canola plastid 53.79 38.73
TraesCS2A01G405000.3 Wheat golgi 60.86 38.5
Solyc10g074490.1.1 Tomato golgi 62.63 38.45
CDY60713 Canola mitochondrion 53.54 38.34
HORVU7Hr1G058080.1 Barley plastid 62.12 37.9
CDY04145 Canola cytosol 31.82 34.33
CDY60465 Canola mitochondrion 37.88 33.33
CDY43245 Canola cytosol 37.63 33.11
CDY34713 Canola cytosol 36.62 31.12
CDY64492 Canola cytosol, endoplasmic reticulum, golgi, plastid 37.37 31.09
CDX78650 Canola golgi 39.65 30.91
CDX70647 Canola golgi 39.39 30.77
CDX69504 Canola golgi 39.39 30.65
CDX70637 Canola golgi 39.39 30.59
CDY26456 Canola golgi 39.14 30.51
CDX81230 Canola mitochondrion 38.38 29.86
CDY18704 Canola mitochondrion 38.38 29.75
CDY62211 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 37.37 29.66
CDX96871 Canola cytosol, endoplasmic reticulum, nucleus, plastid 37.12 29.52
CDX74265 Canola cytosol, endoplasmic reticulum, golgi 37.88 29.18
CDY24821 Canola cytosol, endoplasmic reticulum, golgi 37.88 29.13
CDX91985 Canola golgi 37.63 28.99
CDY34715 Canola cytosol, endoplasmic reticulum, golgi 26.77 27.32
CDY04814 Canola golgi 36.11 25.72
CDY36425 Canola cytosol, endoplasmic reticulum, plasma membrane 29.29 25.16
CDX74650 Canola nucleus, plastid 34.6 21.44
CDY33687 Canola nucleus, plastid 34.6 21.31
CDX70375 Canola nucleus, plastid 7.07 20.59
CDY69490 Canola nucleus, plastid 7.07 20.59
CDX69362 Canola nucleus, plastid 7.07 20.59
CDX68121 Canola nucleus, plastid 7.07 20.59
CDX78406 Canola nucleus, plastid 7.07 20.59
CDX85735 Canola nucleus, plastid 7.07 20.59
CDX85906 Canola nucleus, plastid 7.07 20.59
CDY68289 Canola nucleus, plastid 7.07 20.59
CDY39044 Canola nucleus, plastid 7.07 20.59
CDY13557 Canola nucleus, plastid 7.07 20.59
CDY40321 Canola plastid 32.58 19.79
CDX73509 Canola plastid 31.82 19.57
CDY10480 Canola plastid 32.32 19.54
CDX78207 Canola plastid 31.57 19.38
CDY55908 Canola plastid 31.06 19.28
CDY18412 Canola plastid 34.6 19.03
CDX93336 Canola plastid 34.6 18.84
CDY14499 Canola plastid 32.32 17.83
CDY07758 Canola plastid 32.32 17.83
CDY48112 Canola cytosol, mitochondrion, peroxisome, plasma membrane, plastid 24.49 16.61
Protein Annotations
KEGG:00052+2.4.1.22KEGG:00514+2.4.1.221MapMan:35.1UniProt:A0A078JR70EnsemblPlants:CDY69289ProteinID:CDY69289
ProteinID:CDY69289.1InterPro:FucosylTrfase_plnInterPro:GDP-Fuc_O-FucTrfaseGO:GO:0003674GO:GO:0003824GO:GO:0005975
GO:GO:0006004GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757EnsemblPlantsGene:GSBRNA2T00086173001
PFAM:PF10250PIRSF:PIRSF009360PANTHER:PTHR31818PANTHER:PTHR31818:SF0UniPathway:UPA00378UniParc:UPI0004EE97CB
Description
BnaA06g40810DBnaA06g40810D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JR70]
Coordinates
chrLK039053:-:2740..4350
Molecular Weight (calculated)
45821.2 Da
IEP (calculated)
9.672
GRAVY (calculated)
-0.618
Length
396 amino acids
Sequence
(BLAST)
001: LVIPKPRTKT TYWKDISNFE EIFDVDWFIS HLSKDVKIIK ELPKGEESRL IGLQSIRVPR KCTPSCYLQR VLPLLKKKHV VQLSKFDYRL ANHLDTELQK
101: LRCRVNYHAV RYTETINKMG QILVDRMRTK AKHFVALHLR FEPDMLAFSG CYYGGGQKER LELGVMRRRW KTLHAANPDK VREHGRCPLT PEEIGLMLRG
201: LGFGREVHLY VASGEVYGGD ATLAPLRALF PNLHTKETLT SKKELAPFAR FSSRMAALDF IVCDESDAFV TNNNGNMARI LAGRSRRYMG HKVTIRPNAK
301: KLHKIFTNRH NMTWDEFSTK VRKYQTGFMG EPDEMKAGEG EFHENPTSCI CRKKKANEEL KEDEHDSWPW EYSDIGNVPM ATRSGLDHQS EVDHEN
Best Arabidopsis Sequence Match ( AT4G38390.1 )
(BLAST)
001: MASLKLKKRD NGAEPDKKKL VIAGIRHQLL LLLRRRHRLF PLVSAVSGCL LLILFSFSTL SPPPLIHHNN QVAVEPNPTT PFRVPENGGR SDRQLWSSRL
101: SNLYYACSNA TDTFQVTDTR SQTNRYLLIA TSGGLNQQRT GIIDAVVAAY ILNATLVVPK LDQKSYWKDT SNFEDIFDVD WFISHLSKDV KIIKELPKEE
201: QSRISTSLQS MRVPRKCTPS CYLQRVLPIL TKKHVVQLSK FDYRLSNALD TELQKLRCRV NYHAVRYTES INRMGQLLVD RMRKKAKHFV ALHLRFEPDM
301: LAFSGCYYGG GQKERLELGA MRRRWKTLHA ANPEKVRRHG RCPLTPEEIG LMLRGLGFGK EVHLYVASGE VYGGEDTLAP LRALFPNLHT KETLTSKKEL
401: APFANFSSRM AALDFIVCDK SDAFVTNNNG NMARILAGRR RYLGHKVTIR PNAKKLYEIF KNRHNMTWGE FSSKVRRYQT GFMGEPDEMK PGEGEFHENP
501: ASCICRTSEA RVKEKAKHVN EDDSSEYSEI GNVPISSRSD LDHSQFDEVI F
Arabidopsis Description
RHS17RHS17 [Source:UniProtKB/TrEMBL;Acc:A0A178V2M6]
SUBAcon: [endoplasmic reticulum,nucleus,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.