Factsheet for GSMUA_Achr5P19070_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
endoplasmic reticulum 2
golgi 3
extracellular 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P13270_001	Banana	endoplasmic reticulum, golgi, plasma membrane	54.77	75.17
GSMUA_Achr3P14740_001	Banana	mitochondrion	61.68	71.84
Os04t0563000-01	Rice	endoplasmic reticulum, golgi	61.02	67.21
KXG26900	Sorghum	golgi	62.01	65.11
Zm00001d002668_P004	Maize	golgi	61.84	64.6
TraesCS2D01G401900.1	Wheat	golgi	60.36	64.05
TraesCS2B01G423100.1	Wheat	golgi	59.87	63.64
VIT_03s0038g03240.t01	Wine grape	mitochondrion	61.68	63.34
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	59.54	63.18
PGSC0003DMT400048017	Potato	golgi	56.58	63.12
Solyc01g112070.2.1	Tomato	nucleus	56.25	63.1
HORVU2Hr1G096100.42	Barley	mitochondrion, plastid	59.7	62.59
AT1G20550.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	57.89	62.41
KRH60950	Soybean	endoplasmic reticulum	58.55	62.13
CDY69289	Canola	cytosol	40.46	62.12
Bra025826.1-P	Field mustard	extracellular, golgi, plasma membrane	57.57	61.95
CDY31477	Canola	extracellular, golgi, plasma membrane	57.4	61.88
CDY29524	Canola	extracellular, golgi, plasma membrane	57.4	61.88
KRH51625	Soybean	golgi, mitochondrion, vacuole	57.89	61.22
KRH74090	Soybean	endoplasmic reticulum, golgi, plasma membrane	56.09	61.11
AT1G76270.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	56.74	60.31
KRH14026	Soybean	golgi	56.09	60.14
Bra015771.1-P	Field mustard	golgi	57.07	59.72
CDX87622	Canola	nucleus	54.77	59.25
PGSC0003DMT400075381	Potato	golgi	57.73	59.19
AT4G38390.1	Thale cress	endoplasmic reticulum, nucleus, plasma membrane	53.62	59.17
CDX73250	Canola	golgi	56.41	59.04
Solyc12g094590.1.1	Tomato	unclear	57.57	59.02
TraesCS2A01G405000.3	Wheat	golgi	60.69	58.95
Solyc12g098400.1.1	Tomato	unclear	50.82	57.87
PGSC0003DMT400011606	Potato	golgi	50.49	57.6
CDY54803	Canola	golgi	51.32	56.52
CDY64279	Canola	golgi	51.32	56.52
Bra033562.1-P	Field mustard	golgi	51.15	56.44
PGSC0003DMT400043331	Potato	extracellular	49.01	54.98
GSMUA_Achr7P07030_001	Banana	golgi	45.56	53.68
Solyc10g074490.1.1	Tomato	golgi	55.26	52.09
GSMUA_Achr1P04270_001	Banana	plastid	45.89	51.48
GSMUA_Achr5P27790_001	Banana	cytosol	29.61	42.86
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	29.93	41.65
GSMUA_Achr9P18530_001	Banana	endoplasmic reticulum, golgi	28.95	38.6
GSMUA_Achr10P...	Banana	golgi, mitochondrion, vacuole	30.26	37.63
GSMUA_Achr8P16870_001	Banana	endoplasmic reticulum, plasma membrane, plastid	29.28	36.4
GSMUA_Achr7P20110_001	Banana	cytosol	29.28	35.46
GSMUA_Achr3P06610_001	Banana	mitochondrion, vacuole	30.76	35.02
GSMUA_Achr10P...	Banana	cytosol	29.11	34.71
GSMUA_Achr4P09700_001	Banana	cytosol	28.78	34.59
GSMUA_Achr3P10660_001	Banana	cytosol, golgi, plasma membrane	28.78	34.18
GSMUA_Achr2P14760_001	Banana	golgi, plasma membrane, vacuole	29.28	34.17
GSMUA_Achr4P24230_001	Banana	golgi	17.6	31.01
GSMUA_Achr4P24250_001	Banana	plasma membrane	21.88	30.02
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	26.15	27.37
GSMUA_Achr9P16090_001	Banana	nucleus, peroxisome, plasma membrane	26.97	26.97
GSMUA_Achr5P28820_001	Banana	plastid	23.03	26.52
GSMUA_Achr9P14950_001	Banana	golgi, plasma membrane	6.91	5.63

Protein Annotations

EnsemblPlants:GSMUA_Achr5P19070_001	EnsemblPlants:GSMUA_Achr5T19070_001	EnsemblPlantsGene:GSMUA_Achr5G19070_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	InterPro:FucosylTrfase_pln
InterPro:GDP-Fuc_O-FucTrfase	PANTHER:PTHR31818	PANTHER:PTHR31818:SF1	PFAM:PF10250	PIRSF:PIRSF009360	SEG:seg
TMHMM:TMhelix	UniParc:UPI000294D2A9	UniProt:M0SZT6	MapMan:35.1	:	:

Description

Putative DUF246 domain-containing protein At1g04910 [Source:GMGC_GENE;Acc:GSMUA_Achr5G19070_001]

Coordinates

chr5:-:20565749..20572235

Molecular Weight (calculated)

67863.1 Da

IEP (calculated)

9.716

GRAVY (calculated)

-0.406

Length

608 amino acids

Sequence
(BLAST)

001: MGLQRRRRPE RRVVPSVPVP AALSAAALLL LLVLASHSLL ASSPTAVPKP RTKPSSILVR SSKALVLTRS SSSFLYSDII GLQLKNPVEV RRNAAGAIDV
101: FRVPSGGGGP VADLWGSKLS KDYYGCSNAS SGFATAESNS LPNRYLMIAT SGGLNQQRTG ITDAVVAARI LNATLVVPIL DQKSFWKDAS DFADIFDVDW
201: FIATLRKDVK IIKQLPEKGG KIIRTPYTMR VPRKCTPRCY ESRVLPALMK KHVVKLTKFD YRLSNKLETD LQKLRCRVNY HSLKFTDQIQ AMGDTLIQRM
301: KAKSKHFIAL HLRFEPDMLA FSGCYYGGGE KEKTELGAIR KRWKSLHTRN PEKERRHGKC PLTPEEIGLM LRALGFGNDV HLYVASGEIY GGEETLAPLK
401: TLFPNFHSKE TLATEEELAP FSSYSSRMAA LDFIVCDGSD VFVTNNNGNM ARILAGRRRY FGHKRTIRPN AKKLYSLFPN RTNMTWETFS SKVRTFQKGF
501: MGEPDELRPG RGEFHEYPAA CICEGSKVAA HSNSNDRTEV SHKNGISNVS RSAGEAIDYH SSNEDSDWID LDYGENTPLG RSFSNGTESE YDVFIRQEDP
601: ELDEVLSD

Best Arabidopsis Sequence Match ( AT1G76270.1 )
(BLAST)

001: MNFHRRRYPY YNRLRRLLPL VIAVSLSLLI LFAFLSFLAP PPGDSDRLPP RVRYSSNDAI KATGFHIPRA GGRSDRDIWR SRNAEFFFGC SNASSKFANS
101: KAVTRNDRYL VIATSGGLNQ QRTGIVDAVV AARILNATLV VPKLDQKSYW KDASDFSHIF DVDWFISFLS GDVRIIKQLP LKGGRTWSTS RMRVPRKCNE
201: RCYINRVLPV LLKRHAVQLN KFDYRLSNKL SDDLQKLRCR VNYHALKFTD PILTMGNELV RRMRLRSKHF IALHLRYEPD MLAFSGCYYG GGDKERRELA
301: AIRRRWKTLH INNPEKQRRQ GRCPLTPEEV GLMLRALGYG SDVHIYVASG EVYGGEESLA PLKALFPHFY SKDTIATKEE LEPFSSYSSR MAALDFLVCD
401: ESDVFVTNNN GNMAKILAGR RRYLGHKPTV RPNAKKLYRL FMNKENTTWE EFSSKVRSFQ RGFMGEPKEV RAGRGEFHEN PSTCICEDTE AKAKAQLESR
501: KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS DLQDRGLYNG TSLDYDDPST SDEPELEAML SD

Arabidopsis Description

OFUT16O-fucosyltransferase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q949U4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.