Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- golgi 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G76270.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT1G76270.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT1G76270.1 | CDY23174 | AT3G51920.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87622 | Canola | nucleus | 92.25 | 95.37 |
| AT1G76270.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 90.88 | 92.31 |
| CDY29524 | Canola | extracellular, golgi, plasma membrane | 82.1 | 84.57 |
| CDY31477 | Canola | extracellular, golgi, plasma membrane | 80.89 | 83.33 |
| VIT_18s0001g00100.t01 | Wine grape | endoplasmic reticulum, golgi, mitochondrion | 68.33 | 69.28 |
| KRH60950 | Soybean | endoplasmic reticulum | 68.16 | 69.11 |
| KRH51625 | Soybean | golgi, mitochondrion, vacuole | 67.47 | 68.17 |
| PGSC0003DMT400075381 | Potato | golgi | 67.64 | 66.27 |
| GSMUA_Achr3P14740_001 | Banana | mitochondrion | 59.21 | 65.9 |
| Solyc12g094590.1.1 | Tomato | unclear | 67.13 | 65.77 |
| GSMUA_Achr8P13270_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 47.85 | 62.75 |
| Solyc12g098400.1.1 | Tomato | unclear | 56.8 | 61.8 |
| PGSC0003DMT400011606 | Potato | golgi | 56.11 | 61.16 |
| CDY69289 | Canola | cytosol | 41.31 | 60.61 |
| Os04t0563000-01 | Rice | endoplasmic reticulum, golgi | 56.11 | 59.06 |
| EES15207 | Sorghum | golgi | 58.52 | 58.72 |
| Zm00001d050483_P002 | Maize | golgi | 57.66 | 57.86 |
| KXG26900 | Sorghum | golgi | 57.66 | 57.86 |
| Os08t0554050-01 | Rice | golgi | 59.04 | 57.45 |
| Zm00001d002668_P004 | Maize | golgi | 57.49 | 57.39 |
| TraesCS2B01G423100.1 | Wheat | golgi | 55.59 | 56.47 |
| GSMUA_Achr5P19070_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 59.04 | 56.41 |
| TraesCS2D01G401900.1 | Wheat | golgi | 55.59 | 56.37 |
| TraesCS7D01G276100.1 | Wheat | golgi | 58.18 | 56.33 |
| TraesCS7A01G276200.2 | Wheat | golgi | 57.83 | 55.81 |
| TraesCS7B01G174000.1 | Wheat | golgi | 58.0 | 55.79 |
| CDY54803 | Canola | golgi | 52.84 | 55.62 |
| TraesCS5B01G348700.1 | Wheat | golgi | 55.42 | 55.52 |
| HORVU5Hr1G086560.1 | Barley | golgi | 55.25 | 55.44 |
| CDY64279 | Canola | golgi | 52.67 | 55.43 |
| TraesCS5D01G353700.1 | Wheat | golgi | 55.08 | 55.17 |
| Zm00001d021448_P002 | Maize | mitochondrion | 56.11 | 54.88 |
| OQU89872 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 56.11 | 54.79 |
| HORVU2Hr1G096100.42 | Barley | mitochondrion, plastid | 54.56 | 54.66 |
| TraesCS5A01G347600.2 | Wheat | golgi | 55.08 | 54.61 |
| HORVU7Hr1G058080.1 | Barley | plastid | 58.35 | 52.23 |
| TraesCS2A01G405000.3 | Wheat | golgi | 55.94 | 51.92 |
| CDY53645 | Canola | mitochondrion | 46.13 | 50.57 |
| CDY50845 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 45.96 | 50.19 |
| CDX90501 | Canola | mitochondrion | 46.82 | 49.19 |
| CDY32271 | Canola | plastid | 46.3 | 48.91 |
| CDY40517 | Canola | mitochondrion | 46.3 | 48.82 |
| CDY60713 | Canola | mitochondrion | 46.3 | 48.64 |
| CDY04145 | Canola | cytosol | 24.96 | 39.51 |
| CDY60465 | Canola | mitochondrion | 29.26 | 37.78 |
| CDY43245 | Canola | cytosol | 29.09 | 37.56 |
| CDY64492 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 29.6 | 36.13 |
| CDY26456 | Canola | golgi | 31.15 | 35.63 |
| CDX69504 | Canola | golgi | 31.15 | 35.56 |
| CDX70637 | Canola | golgi | 30.98 | 35.29 |
| CDX78650 | Canola | golgi | 30.81 | 35.24 |
| CDX70647 | Canola | golgi | 30.64 | 35.11 |
| CDY18704 | Canola | mitochondrion | 30.64 | 34.83 |
| CDX81230 | Canola | mitochondrion | 30.46 | 34.77 |
| CDY62211 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 29.6 | 34.47 |
| CDX96871 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 29.43 | 34.34 |
| CDY34715 | Canola | cytosol, endoplasmic reticulum, golgi | 22.89 | 34.28 |
| CDX91985 | Canola | golgi | 30.12 | 34.05 |
| CDY24821 | Canola | cytosol, endoplasmic reticulum, golgi | 30.12 | 33.98 |
| CDX74265 | Canola | cytosol, endoplasmic reticulum, golgi | 29.95 | 33.85 |
| CDY04814 | Canola | golgi | 32.36 | 33.81 |
| CDY34713 | Canola | cytosol | 25.47 | 31.76 |
| CDY36425 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 23.41 | 29.5 |
| CDX78207 | Canola | plastid | 31.33 | 28.22 |
| CDX74650 | Canola | nucleus, plastid | 30.81 | 28.01 |
| CDX73509 | Canola | plastid | 30.98 | 27.95 |
| CDY33687 | Canola | nucleus, plastid | 30.64 | 27.68 |
| CDY55908 | Canola | plastid | 28.57 | 26.02 |
| CDY40321 | Canola | plastid | 29.09 | 25.92 |
| CDY10480 | Canola | plastid | 28.92 | 25.65 |
| CDY48112 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 25.3 | 25.17 |
| CDY18412 | Canola | plastid | 30.64 | 24.72 |
| CDX93336 | Canola | plastid | 30.29 | 24.21 |
| CDY14499 | Canola | plastid | 29.43 | 23.82 |
| CDY07758 | Canola | plastid | 29.43 | 23.82 |
| CDY69490 | Canola | nucleus, plastid | 5.51 | 23.53 |
| CDY68289 | Canola | nucleus, plastid | 5.51 | 23.53 |
| CDY39044 | Canola | nucleus, plastid | 5.51 | 23.53 |
| CDY13557 | Canola | nucleus, plastid | 5.51 | 23.53 |
| CDX85906 | Canola | nucleus, plastid | 5.51 | 23.53 |
| CDX85735 | Canola | nucleus, plastid | 5.51 | 23.53 |
| CDX78406 | Canola | nucleus, plastid | 5.51 | 23.53 |
| CDX70375 | Canola | nucleus, plastid | 5.51 | 23.53 |
| CDX69362 | Canola | nucleus, plastid | 5.51 | 23.53 |
| CDX68121 | Canola | nucleus, plastid | 5.51 | 23.53 |
Protein Annotations
| EnsemblPlants:CDX73250 | EnsemblPlantsGene:GSBRNA2T00103752001 | InterPro:FucosylTrfase_pln | InterPro:GDP-Fuc_O-FucTrfase | KEGG:00052+2.4.1.22 | KEGG:00514+2.4.1.221 |
| PANTHER:PTHR31818 | PANTHER:PTHR31818:SF1 | PFAM:PF10250 | PIRSF:PIRSF009360 | ProteinID:CDX73250 | ProteinID:CDX73250.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDF116 | UniPathway:UPA00378 | MapMan:35.1 | : |
Description
BnaC06g36980D
Coordinates
chrLK031797:-:2881451..2884113
Molecular Weight (calculated)
66481.9 Da
IEP (calculated)
9.522
GRAVY (calculated)
-0.640
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFQRRRYPY YNRLRRLLPL VFAVSLSLLV LFAFLSFLAP HPGDSDRLPP RVRHTSINIG GGSDSIKSAA FRVPRDGGRS DRDVWRSRNA EFFCGCSNAS
101: TKFPNSKAVT RNDRYLAIAT SGGLNQQRTG IVDAVVAARI LNATLVVPKL DQKSYWKDAS DFSHIFDVDW FVSFLSDDVR VVKQLPQKGG RPWSPSRMRV
201: PRKCNERCYI NRVLPVLHKR HAVQLNKFDY RLSNKLSDEL QKLRCRVNYH ALKFTDPILK MGNELVRRMR LRSKHFIALH LRFEPDMLAF SGCYYGGGDK
301: ERRELAAIRR RWKTLHINNP EKQRRQGRCP LTPEEVGLML RALGYGSDVH IYVASGEVYG GEESLAPLKA LFPHFYSKDT IATKEELEPF ASYSSRMAAL
401: DFLVCDESDV FVTNNNGNMA KILAGRRRYF GHKPTVRPNA KKLYRLFLNK ENTTWEEFTS RVRSFQRGFM GEPKEVRAGR GEFHENPSTC ICEDTEAKAK
501: AQIESRKLGK KNKSTNKDTA AAVVTVPNDG QSEEDEPDWS EPDYEEEQSD LQDRGLYNGT SLDYDDPSTS DEPELEEMLS D
101: TKFPNSKAVT RNDRYLAIAT SGGLNQQRTG IVDAVVAARI LNATLVVPKL DQKSYWKDAS DFSHIFDVDW FVSFLSDDVR VVKQLPQKGG RPWSPSRMRV
201: PRKCNERCYI NRVLPVLHKR HAVQLNKFDY RLSNKLSDEL QKLRCRVNYH ALKFTDPILK MGNELVRRMR LRSKHFIALH LRFEPDMLAF SGCYYGGGDK
301: ERRELAAIRR RWKTLHINNP EKQRRQGRCP LTPEEVGLML RALGYGSDVH IYVASGEVYG GEESLAPLKA LFPHFYSKDT IATKEELEPF ASYSSRMAAL
401: DFLVCDESDV FVTNNNGNMA KILAGRRRYF GHKPTVRPNA KKLYRLFLNK ENTTWEEFTS RVRSFQRGFM GEPKEVRAGR GEFHENPSTC ICEDTEAKAK
501: AQIESRKLGK KNKSTNKDTA AAVVTVPNDG QSEEDEPDWS EPDYEEEQSD LQDRGLYNGT SLDYDDPSTS DEPELEEMLS D
001: MNFHRRRYPY YNRLRRLLPL VIAVSLSLLI LFAFLSFLAP PPGDSDRLPP RVRYSSNDAI KATGFHIPRA GGRSDRDIWR SRNAEFFFGC SNASSKFANS
101: KAVTRNDRYL VIATSGGLNQ QRTGIVDAVV AARILNATLV VPKLDQKSYW KDASDFSHIF DVDWFISFLS GDVRIIKQLP LKGGRTWSTS RMRVPRKCNE
201: RCYINRVLPV LLKRHAVQLN KFDYRLSNKL SDDLQKLRCR VNYHALKFTD PILTMGNELV RRMRLRSKHF IALHLRYEPD MLAFSGCYYG GGDKERRELA
301: AIRRRWKTLH INNPEKQRRQ GRCPLTPEEV GLMLRALGYG SDVHIYVASG EVYGGEESLA PLKALFPHFY SKDTIATKEE LEPFSSYSSR MAALDFLVCD
401: ESDVFVTNNN GNMAKILAGR RRYLGHKPTV RPNAKKLYRL FMNKENTTWE EFSSKVRSFQ RGFMGEPKEV RAGRGEFHEN PSTCICEDTE AKAKAQLESR
501: KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS DLQDRGLYNG TSLDYDDPST SDEPELEAML SD
101: KAVTRNDRYL VIATSGGLNQ QRTGIVDAVV AARILNATLV VPKLDQKSYW KDASDFSHIF DVDWFISFLS GDVRIIKQLP LKGGRTWSTS RMRVPRKCNE
201: RCYINRVLPV LLKRHAVQLN KFDYRLSNKL SDDLQKLRCR VNYHALKFTD PILTMGNELV RRMRLRSKHF IALHLRYEPD MLAFSGCYYG GGDKERRELA
301: AIRRRWKTLH INNPEKQRRQ GRCPLTPEEV GLMLRALGYG SDVHIYVASG EVYGGEESLA PLKALFPHFY SKDTIATKEE LEPFSSYSSR MAALDFLVCD
401: ESDVFVTNNN GNMAKILAGR RRYLGHKPTV RPNAKKLYRL FMNKENTTWE EFSSKVRSFQ RGFMGEPKEV RAGRGEFHEN PSTCICEDTE AKAKAQLESR
501: KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS DLQDRGLYNG TSLDYDDPST SDEPELEAML SD
Arabidopsis Description
OFUT16O-fucosyltransferase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q949U4]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.