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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plastid 3
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009626.1-P Field mustard plastid 98.16 98.77
CDY10480 Canola plastid 92.79 92.37
CDY55908 Canola plastid 80.67 82.45
AT5G01100.1 Thale cress plastid 79.75 82.41
CDY48112 Canola cytosol, mitochondrion, peroxisome, plasma membrane, plastid 70.71 78.94
Os05t0451900-01 Rice cytosol 39.72 61.67
KRH65987 Soybean cytosol 46.32 61.63
OQU87869 Sorghum mitochondrion 41.72 58.0
VIT_08s0007g01650.t01 Wine grape plastid 52.91 55.83
CDX78207 Canola plastid 52.61 53.18
CDX73509 Canola plastid 52.45 53.11
KRH75793 Soybean plastid 50.92 51.96
PGSC0003DMT400052382 Potato plastid 51.07 51.87
Solyc09g011860.2.1 Tomato plastid 51.07 51.71
PGSC0003DMT400028801 Potato plastid 50.77 51.64
TraesCS3B01G397600.1 Wheat plastid 43.4 51.45
TraesCS3D01G358900.2 Wheat plastid 43.25 51.09
TraesCS3A01G365800.1 Wheat plastid 43.25 50.72
Solyc10g085050.1.1 Tomato cytosol 46.01 49.75
HORVU1Hr1G073150.1 Barley plastid 45.4 49.42
TraesCS1B01G288800.1 Wheat plastid 45.55 49.17
Zm00001d038263_P001 Maize plastid 42.94 48.87
Zm00001d012362_P001 Maize plastid 40.8 48.81
GSMUA_Achr5P28820_001 Banana plastid 39.26 48.48
TraesCS1A01G279800.1 Wheat plastid 45.09 48.36
CDY18412 Canola plastid 53.07 48.06
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, plasma membrane, plastid 42.79 48.02
CDX93336 Canola plastid 53.22 47.73
KXG22127 Sorghum plastid 44.63 47.63
TraesCS1D01G279000.1 Wheat plastid 41.56 47.54
Zm00001d010112_P001 Maize cytosol, plastid 41.56 46.89
Os01t0851100-02 Rice plastid 30.37 46.26
CDY60465 Canola mitochondrion 31.75 46.0
CDY14499 Canola plastid 50.61 45.96
CDY07758 Canola plastid 50.46 45.82
CDY43245 Canola cytosol 31.6 45.78
CDX74650 Canola nucleus, plastid 43.1 43.98
CDY33687 Canola nucleus, plastid 43.1 43.7
CDX78650 Canola golgi 33.44 42.91
CDY04145 Canola cytosol 24.08 42.78
CDX70647 Canola golgi 33.13 42.6
CDY18704 Canola mitochondrion 33.28 42.47
CDX81230 Canola mitochondrion 33.13 42.44
CDX70637 Canola golgi 33.13 42.35
CDY26456 Canola golgi 32.67 41.93
CDX69504 Canola golgi 32.67 41.85
CDX74265 Canola cytosol, endoplasmic reticulum, golgi 32.21 40.86
CDX91985 Canola golgi 31.9 40.47
CDY24821 Canola cytosol, endoplasmic reticulum, golgi 31.9 40.39
CDY62211 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 30.37 39.68
CDX96871 Canola cytosol, endoplasmic reticulum, nucleus, plastid 30.21 39.56
CDY64492 Canola cytosol, endoplasmic reticulum, golgi, plastid 28.53 39.08
CDY34713 Canola cytosol 27.45 38.41
CDY34715 Canola cytosol, endoplasmic reticulum, golgi 22.7 38.14
CDY36425 Canola cytosol, endoplasmic reticulum, plasma membrane 26.23 37.09
CDY04814 Canola golgi 31.44 36.87
CDY69289 Canola cytosol 19.79 32.58
CDY50845 Canola cytosol, endoplasmic reticulum, golgi, plastid 25.77 31.58
CDY53645 Canola mitochondrion 25.61 31.51
CDY32271 Canola plastid 26.07 30.91
CDY64279 Canola golgi 26.07 30.8
CDY54803 Canola golgi 26.07 30.8
CDY60713 Canola mitochondrion 26.07 30.74
CDX90501 Canola mitochondrion 26.07 30.74
CDY40517 Canola mitochondrion 25.92 30.67
CDY31477 Canola extracellular, golgi, plasma membrane 26.38 30.5
CDY29524 Canola extracellular, golgi, plasma membrane 26.38 30.5
CDX73250 Canola golgi 25.92 29.09
CDX87622 Canola nucleus 24.23 28.11
CDX78406 Canola nucleus, plastid 4.75 22.79
CDY39044 Canola nucleus, plastid 4.75 22.79
CDX85735 Canola nucleus, plastid 4.75 22.79
CDX85906 Canola nucleus, plastid 4.75 22.79
CDY69490 Canola nucleus, plastid 4.75 22.79
CDX70375 Canola nucleus, plastid 4.75 22.79
CDX69362 Canola nucleus, plastid 4.75 22.79
CDY13557 Canola nucleus, plastid 4.75 22.79
CDY68289 Canola nucleus, plastid 4.75 22.79
CDX68121 Canola nucleus, plastid 4.75 22.79
Protein Annotations
KEGG:00052+2.4.1.22KEGG:00514+2.4.1.221MapMan:35.1GO:A0A078HRJ5UniProt:A0A078HRJ5EnsemblPlants:CDY40321
ProteinID:CDY40321ProteinID:CDY40321.1InterPro:FucosylTrfase_plnInterPro:GDP-Fuc_O-FucTrfaseGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005975GO:GO:0006004GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0016757EnsemblPlantsGene:GSBRNA2T00069502001PFAM:PF10250PIRSF:PIRSF009360
PANTHER:PTHR31741PANTHER:PTHR31741:SF4TMHMM:TMhelixUniPathway:UPA00378UniParc:UPI0004EF0B6FSEG:seg
Description
BnaA10g27470DBnaA10g27470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRJ5]
Coordinates
chrLK032468:+:106490..109696
Molecular Weight (calculated)
73526.7 Da
IEP (calculated)
8.845
GRAVY (calculated)
-0.404
Length
652 amino acids
Sequence
(BLAST)
001: MSVGVPVNTS SSSQLPAATT RRRVADSQED HCNVSTVGGG NAVVYVPDEE EEATSCSSLS DGGGISSCCP SGSHNNYLVG FLSLRRVRLV WMLMVDNKSQ
101: WTAKNMRSAS NLGRVILSLL GILVFTFFLI VAFSGGRRQH VEEKHEFVFS IHPRNSIEKI IREEESSSDS IQLLLPRRKP IPEIWNQPDT GSYHKCLTRP
201: KNQRPIKQTN GYLVVHANGG LNQMRTGICD MVAIAKIMNA SLVLPFLDHS SFWSDPSTFK DIFDWRHFIN VLAEDVNIVE YLPQELASIK PLEKNPVSWS
301: KASYYRNSIS KLLKKHKVIV FNHTDSRLAN NSPPPSIQRL RCRANYEALR YSPEIDNLSK VLTSRLRENN EPYLALHLRY EKDMLAFTGC NHSLTSEESI
401: ALEKMRYSIP HWKEKVINGT ERRLEGNCPM TPREAAVFLK AVGFPSSTKI YIVAGEIYGE NSMTAFHQEF PNVFSHSTLA TEEELSTIKP YQNRLAALDY
501: NVALESDVFA YTYDGNMAKA VQGHRRFEGF RKTINPDRQR LVKLIDRLDA GLMSWEDFSS KVKRLHGKRI GAPYVRRAGL SPKLEENFYA NPLPGCLCDT
601: SSDEPRQPRG QTTARVSNLQ TEQYSCLSSQ TPLKEKRGTS ICISLSFVNL EA
Best Arabidopsis Sequence Match ( AT5G01100.1 )
(BLAST)
001: MSVGVPVNPS SSSQLPAAPT TTTRRRVADS QEDHSHVNTV GGGNAVVYVP DEEETATSCC GGGGGGGSLS CCPSGSHHNY LVGFLSLRKF RLVWMLMVEN
101: KSKWTAGIAR NMRSTTNLGR FILTLLSILV VTFFLIVALS GGVGRRRKHV EKHEFVVSIH PRPTIEKIIR EDESSNSFQV LVPKTTSIPE IWNQPEVGNY
201: QKCVARPKNQ RPIKQTNGYL LVHANGGLNQ MRTGICDMVA IAKIMNATLV LPFLDHSSFW SDPSSFKDIF DWKHFIKVLA EDVNIVEYLP QEFASIKPLE
301: KNPVSWSKSS YYRNSISKLL KKHKVIVFNH TDSRLANNSP PPSIQRLRCR ANYEALRYSE DIENLSNVLS SRLRENNEPY LALHLRYEKD MLAFTGCNHS
401: LSNEESIDLE KMRFSIPHWK EKVINGTERR LEGNCPMTPR EAAVFLKAMG FPSTTNIYIV AGKIYGQNSM TAFHEEFPNV FFHNTLATEE ELSTIKPYQN
501: RLAALDYNLA LESDIFAYTY DGNMAKAVQG HRRFEGFRKT INPDRQRFVR LIDRLDAGLI SWEDFSSKVK KMHQHRIGAP YLRQPGKAGM SPKLEENFYA
601: NPLPGCVCDT SEEQTGLNRF ERPSLRAQSL R
Arabidopsis Description
FRB1FRB1 [Source:UniProtKB/TrEMBL;Acc:A0A178U817]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.