Factsheet for Solyc10g085050.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
golgi 1
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028801	Potato	plastid	92.87	87.36
KRH65987	Soybean	cytosol	54.56	67.14
Solyc09g011860.2.1	Tomato	plastid	69.82	65.37
VIT_08s0007g01650.t01	Wine grape	plastid	63.18	61.65
Os05t0451900-01	Rice	cytosol	42.62	61.19
KRH75793	Soybean	plastid	62.35	58.84
OQU87869	Sorghum	mitochondrion	45.27	58.21
Bra000033.1-P	Field mustard	plastid	57.71	55.5
AT3G54100.1	Thale cress	cytosol	58.54	55.33
AT2G37980.1	Thale cress	plastid	58.04	54.86
CDX78207	Canola	plastid	57.88	54.11
Bra007045.1-P	Field mustard	plastid	57.71	53.95
CDX73509	Canola	plastid	57.05	53.42
Solyc03g096370.2.1	Tomato	golgi, mitochondrion, nucleus	44.44	50.85
TraesCS3B01G397600.1	Wheat	plastid	45.94	50.36
TraesCS3D01G358900.2	Wheat	plastid	46.1	50.36
TraesCS3A01G365800.1	Wheat	plastid	46.1	50.0
TraesCS1D01G279000.1	Wheat	plastid	46.93	49.65
Os01t0851100-02	Rice	plastid	34.99	49.3
Bra017145.1-P	Field mustard	plastid	58.54	49.16
Solyc01g010930.2.1	Tomato	cytosol, extracellular	21.72	49.06
CDY18412	Canola	plastid	58.21	48.75
CDY07758	Canola	plastid	58.04	48.75
CDY14499	Canola	plastid	57.88	48.61
CDX93336	Canola	plastid	58.54	48.56
HORVU1Hr1G073150.1	Barley	plastid	48.09	48.41
Bra028889.1-P	Field mustard	plastid	50.41	48.18
TraesCS1B01G288800.1	Wheat	plastid	47.93	47.85
CDY55908	Canola	plastid	50.41	47.65
Zm00001d038263_P001	Maize	plastid	45.27	47.64
AT5G01100.1	Thale cress	plastid	49.75	47.54
TraesCS1A01G279800.1	Wheat	plastid	47.93	47.53
Zm00001d012362_P001	Maize	plastid	42.95	47.52
GSMUA_Achr5P28820_001	Banana	plastid	41.46	47.35
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plasma membrane, plastid	45.61	47.33
KXG22127	Sorghum	plastid	47.43	46.81
Zm00001d010112_P001	Maize	cytosol, plastid	44.61	46.54
Bra009626.1-P	Field mustard	plastid	49.92	46.45
CDY40321	Canola	plastid	49.75	46.01
CDY10480	Canola	plastid	49.42	45.5
CDY48112	Canola	cytosol, mitochondrion, peroxisome, plasma membrane, plastid	41.96	43.32
Solyc07g041750.2.1	Tomato	plastid	44.44	41.49
Solyc06g069380.2.1	Tomato	mitochondrion	32.34	39.47
Solyc11g005870.1.1	Tomato	mitochondrion	32.17	39.35
Solyc04g074670.2.1	Tomato	mitochondrion	34.49	38.88
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	32.34	38.77
Solyc03g114730.2.1	Tomato	cytosol	31.68	38.28
Solyc12g038670.1.1	Tomato	cytosol	32.01	37.84
Solyc12g098400.1.1	Tomato	unclear	27.36	30.9
Solyc06g060750.2.1	Tomato	mitochondrion	27.53	30.74
Solyc01g112070.2.1	Tomato	nucleus	26.53	29.52
Solyc08g078540.2.1	Tomato	mitochondrion, plastid	27.69	28.21
Solyc12g094590.1.1	Tomato	unclear	27.53	27.99
Solyc10g074490.1.1	Tomato	golgi	28.03	26.2
Solyc11g010230.1.1	Tomato	nucleus	5.64	25.0
Solyc05g051500.2.1	Tomato	nucleus, plastid	5.64	25.0
Solyc04g081150.2.1	Tomato	nucleus, plastid	5.64	25.0
Solyc04g074580.1.1	Tomato	nucleus, plastid	5.64	25.0

Protein Annotations

MapMan:35.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006004	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	UniProt:K4D3T9
PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31741	PANTHER:PTHR31741:SF4	EnsemblPlantsGene:Solyc10g085050.1	EnsemblPlants:Solyc10g085050.1.1
TMHMM:TMhelix	UniParc:UPI000276A709	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:64361584..64364057

Molecular Weight (calculated)

68670.4 Da

IEP (calculated)

9.024

GRAVY (calculated)

-0.365

Length

603 amino acids

Sequence
(BLAST)

001: MSTGGTATNS ASGSPRVAGT GLTIHHRRPV MENDPEKLSD HIQIGFDNYY GDNNNNNANI INAGSGNLPY YHHHHHSRTI VRYLLACKWV PESLIFRVEE
101: CLLSFCSIMA CLGSRYNMGR TILGILLVLV MISVFFKFSI VMNGDVNGNL MSKDHGLFVV QNFKNDWVNA QKVVSETQSS VSVSSSGGVA RKRQMEELPV
201: PEIWMKPPSD TYYKCIAPPR DRIRTGSSTN GYVLVHANGG LNQMRTGICD MVAIAKILNA TLVLPSLDHE SFWTDPSDFK DIFDWRRFID VLKDDIKIVE
301: SLPPKYAAVT PIQKAPVSWS KASYYRGEVL PLLKKHKVIQ FTHTDSRLAN NGLASSIQRL RCRANYEALR YTNEIEELGK KLVDRLRDNG EPYIALHLRY
401: EKDMLAFTGC SNNLTAQEAE ELRYMRYQVK HWKEKEIDGN EKRLQGGCPM SPREAALFLK AMGYPSTTRI YIVAGEIYGN NSMDAFRNEY PNVFSHSTLT
501: TMEELGTFRH YQNRLAALDY LVALESDVFV YTYDGNMAKA VQGHRRFEGF QKTISPDRLN VVRLIDLLDK GTITREEFTS ERSRRITKIR RELLCKSFPR
601: LYM

Best Arabidopsis Sequence Match ( AT3G54100.1 )
(BLAST)

001: MSVVGAINPV PIAPTTRRRV GDSLDVISER PSNSSDYCNT INQPIVGSTD LDGGDATGQD SSPSSESSAS STGSHYHHDH YHRFYSHPVI RYLLLRKFWI
101: PFYGGASTVV IGQGFRSGRN VGRRILGLLM LLVVASVFLR VYLMGGVRVV DHARLKEFVV VRTLRDDWSM AQREVAENQA SSQPMRVLEK LPIPEIWQKP
201: ESGNYRQCVT RPKNYTRLQR QTNGYLVVHA NGGLNQMRTG ICDMVAVAKI MNATLVLPLL DHESFWTDPS TFKDIFDWRN FMNVLKHDVD IVEYLPPQYA
301: AMKPLLKAPV SWSKASYYRS EMLPLLKRHK VLKFTLTDSR LANNGLPPSI QRLRCRANYQ ALLYTKEIED LGKILVNRLR NNTEPYIALH LRYEKDMLAF
401: TGCNHNLTTE EAEELRIMRY SVKHWKEKEI DSRERRIQGG CPMSPREAAI FLKAMGYPSS TTVYIVAGEI YGSESMDAFR AEYPNVFSHS TLATEEELEP
501: FSQYQNRLAA LDYIVALESD VFVYTYDGNM AKAVQGHRKF EGFRKSINPD RLNFVRLIDH FDEGIISWEE FSSEVKRLNR DRIGAAYGRL PAALPRLEEN
601: FYANPQPDCI CNKSHPEQLR KQSSLRTDSK SWKKSALR

Arabidopsis Description

OFUT28O-fucosyltransferase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9M393]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.