Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73509 | Canola | plastid | 85.42 | 84.63 |
| CDX78207 | Canola | plastid | 85.42 | 84.5 |
| Bra007045.1-P | Field mustard | plastid | 85.42 | 84.5 |
| AT2G37980.1 | Thale cress | plastid | 79.0 | 79.0 |
| KRH65987 | Soybean | cytosol | 54.39 | 70.82 |
| Os05t0451900-01 | Rice | cytosol | 43.73 | 66.43 |
| VIT_08s0007g01650.t01 | Wine grape | plastid | 63.17 | 65.21 |
| KRH75793 | Soybean | plastid | 61.91 | 61.82 |
| OQU87869 | Sorghum | mitochondrion | 44.04 | 59.91 |
| Solyc10g085050.1.1 | Tomato | cytosol | 55.33 | 58.54 |
| PGSC0003DMT400028801 | Potato | plastid | 58.62 | 58.35 |
| PGSC0003DMT400052382 | Potato | plastid | 58.62 | 58.26 |
| Solyc09g011860.2.1 | Tomato | plastid | 58.31 | 57.76 |
| TraesCS3B01G397600.1 | Wheat | plastid | 47.49 | 55.09 |
| AT5G01100.1 | Thale cress | plastid | 53.92 | 54.52 |
| TraesCS3D01G358900.2 | Wheat | plastid | 47.02 | 54.35 |
| TraesCS3A01G365800.1 | Wheat | plastid | 47.34 | 54.32 |
| HORVU1Hr1G073150.1 | Barley | plastid | 49.53 | 52.75 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plasma membrane, plastid | 47.96 | 52.67 |
| GSMUA_Achr5P28820_001 | Banana | plastid | 43.42 | 52.46 |
| TraesCS1B01G288800.1 | Wheat | plastid | 49.06 | 51.82 |
| KXG22127 | Sorghum | plastid | 49.37 | 51.55 |
| Zm00001d038263_P001 | Maize | plastid | 46.24 | 51.48 |
| TraesCS1A01G279800.1 | Wheat | plastid | 48.9 | 51.32 |
| TraesCS1D01G279000.1 | Wheat | plastid | 45.45 | 50.88 |
| Zm00001d010112_P001 | Maize | cytosol, plastid | 46.08 | 50.87 |
| Zm00001d012362_P001 | Maize | plastid | 42.16 | 49.36 |
| Os01t0851100-02 | Rice | plastid | 33.07 | 49.3 |
| AT5G35570.1 | Thale cress | cytosol, plastid | 45.3 | 44.33 |
| AT5G15740.1 | Thale cress | golgi | 33.07 | 41.54 |
| AT5G64600.1 | Thale cress | mitochondrion | 33.54 | 41.0 |
| AT1G14020.1 | Thale cress | cytosol, endoplasmic reticulum, golgi | 31.66 | 40.48 |
| AT3G02250.1 | Thale cress | golgi | 32.29 | 40.23 |
| AT2G03280.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 30.25 | 37.99 |
| AT1G22460.1 | Thale cress | golgi | 33.07 | 37.35 |
| AT4G16650.2 | Thale cress | mitochondrion, plastid | 28.53 | 33.15 |
| AT1G76270.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 28.53 | 31.82 |
| AT1G20550.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 27.74 | 31.38 |
| AT4G38390.1 | Thale cress | endoplasmic reticulum, nucleus, plasma membrane | 26.8 | 31.03 |
Protein Annotations
| MapMan:35.1 | EntrezGene:824577 | ProteinID:AEE79188.1 | ArrayExpress:AT3G54100 | EnsemblPlantsGene:AT3G54100 | RefSeq:AT3G54100 |
| TAIR:AT3G54100 | RefSeq:AT3G54100-TAIR-G | EnsemblPlants:AT3G54100.1 | TAIR:AT3G54100.1 | EMBL:BX823589 | ProteinID:CAB70984.1 |
| ncoils:Coil | InterPro:FucosylTrfase_pln | InterPro:GDP-Fuc_O-FucTrfase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0006004 | GO:GO:0006464 |
| GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 | EMBL:KY906070 | RefSeq:NP_190978.1 |
| PFAM:PF10250 | PIRSF:PIRSF009360 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR31741 | PANTHER:PTHR31741:SF4 | UniProt:Q9M393 |
| TMHMM:TMhelix | UniParc:UPI00000A96BA | SEG:seg | : | : | : |
Description
OFUT28O-fucosyltransferase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9M393]
Coordinates
chr3:-:20033951..20038200
Molecular Weight (calculated)
72911.2 Da
IEP (calculated)
9.248
GRAVY (calculated)
-0.424
Length
638 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVVGAINPV PIAPTTRRRV GDSLDVISER PSNSSDYCNT INQPIVGSTD LDGGDATGQD SSPSSESSAS STGSHYHHDH YHRFYSHPVI RYLLLRKFWI
101: PFYGGASTVV IGQGFRSGRN VGRRILGLLM LLVVASVFLR VYLMGGVRVV DHARLKEFVV VRTLRDDWSM AQREVAENQA SSQPMRVLEK LPIPEIWQKP
201: ESGNYRQCVT RPKNYTRLQR QTNGYLVVHA NGGLNQMRTG ICDMVAVAKI MNATLVLPLL DHESFWTDPS TFKDIFDWRN FMNVLKHDVD IVEYLPPQYA
301: AMKPLLKAPV SWSKASYYRS EMLPLLKRHK VLKFTLTDSR LANNGLPPSI QRLRCRANYQ ALLYTKEIED LGKILVNRLR NNTEPYIALH LRYEKDMLAF
401: TGCNHNLTTE EAEELRIMRY SVKHWKEKEI DSRERRIQGG CPMSPREAAI FLKAMGYPSS TTVYIVAGEI YGSESMDAFR AEYPNVFSHS TLATEEELEP
501: FSQYQNRLAA LDYIVALESD VFVYTYDGNM AKAVQGHRKF EGFRKSINPD RLNFVRLIDH FDEGIISWEE FSSEVKRLNR DRIGAAYGRL PAALPRLEEN
601: FYANPQPDCI CNKSHPEQLR KQSSLRTDSK SWKKSALR
101: PFYGGASTVV IGQGFRSGRN VGRRILGLLM LLVVASVFLR VYLMGGVRVV DHARLKEFVV VRTLRDDWSM AQREVAENQA SSQPMRVLEK LPIPEIWQKP
201: ESGNYRQCVT RPKNYTRLQR QTNGYLVVHA NGGLNQMRTG ICDMVAVAKI MNATLVLPLL DHESFWTDPS TFKDIFDWRN FMNVLKHDVD IVEYLPPQYA
301: AMKPLLKAPV SWSKASYYRS EMLPLLKRHK VLKFTLTDSR LANNGLPPSI QRLRCRANYQ ALLYTKEIED LGKILVNRLR NNTEPYIALH LRYEKDMLAF
401: TGCNHNLTTE EAEELRIMRY SVKHWKEKEI DSRERRIQGG CPMSPREAAI FLKAMGYPSS TTVYIVAGEI YGSESMDAFR AEYPNVFSHS TLATEEELEP
501: FSQYQNRLAA LDYIVALESD VFVYTYDGNM AKAVQGHRKF EGFRKSINPD RLNFVRLIDH FDEGIISWEE FSSEVKRLNR DRIGAAYGRL PAALPRLEEN
601: FYANPQPDCI CNKSHPEQLR KQSSLRTDSK SWKKSALR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.