Factsheet for AT1G76270.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73250	Canola	golgi	92.31	90.88
Bra015771.1-P	Field mustard	golgi	92.31	90.88
CDX87622	Canola	nucleus	87.06	88.61
AT1G20550.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	80.77	81.91
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	69.23	69.11
KRH60950	Soybean	endoplasmic reticulum	68.36	68.24
KRH51625	Soybean	golgi, mitochondrion, vacuole	67.66	67.3
GSMUA_Achr3P14740_001	Banana	mitochondrion	60.31	66.09
PGSC0003DMT400075381	Potato	golgi	68.01	65.6
Solyc12g094590.1.1	Tomato	unclear	67.66	65.26
GSMUA_Achr8P13270_001	Banana	endoplasmic reticulum, golgi, plasma membrane	48.78	62.98
Solyc12g098400.1.1	Tomato	unclear	56.99	61.05
PGSC0003DMT400011606	Potato	golgi	56.29	60.41
Os04t0563000-01	Rice	endoplasmic reticulum, golgi	57.52	59.6
EES15207	Sorghum	golgi	59.44	58.72
AT4G38390.1	Thale cress	endoplasmic reticulum, nucleus, plasma membrane	55.77	57.89
KXG26900	Sorghum	golgi	58.39	57.69
Zm00001d002668_P004	Maize	golgi	58.57	57.56
Zm00001d050483_P002	Maize	golgi	58.22	57.51
TraesCS2B01G423100.1	Wheat	golgi	57.34	57.34
TraesCS2D01G401900.1	Wheat	golgi	57.17	57.07
GSMUA_Achr5P19070_001	Banana	endoplasmic reticulum, golgi, plasma membrane	60.31	56.74
Os08t0554050-01	Rice	golgi	59.09	56.62
TraesCS7D01G276100.1	Wheat	golgi	58.74	56.0
HORVU5Hr1G086560.1	Barley	golgi	56.64	55.96
TraesCS5B01G348700.1	Wheat	golgi	56.29	55.52
TraesCS7A01G276200.2	Wheat	golgi	58.39	55.48
TraesCS7B01G174000.1	Wheat	golgi	58.57	55.46
TraesCS5D01G353700.1	Wheat	golgi	55.94	55.17
HORVU2Hr1G096100.42	Barley	mitochondrion, plastid	55.77	55.0
TraesCS5A01G347600.2	Wheat	golgi	56.12	54.78
Zm00001d021448_P002	Maize	mitochondrion	56.82	54.71
OQU89872	Sorghum	endoplasmic reticulum, golgi, plasma membrane	56.82	54.62
TraesCS2A01G405000.3	Wheat	golgi	57.52	52.56
HORVU7Hr1G058080.1	Barley	plastid	58.74	51.77
AT4G16650.2	Thale cress	mitochondrion, plastid	47.55	49.54
AT5G15740.1	Thale cress	golgi	31.64	35.63
AT2G03280.2	Thale cress	cytosol, endoplasmic reticulum, golgi	30.94	34.84
AT3G02250.1	Thale cress	golgi	30.77	34.38
AT1G14020.1	Thale cress	cytosol, endoplasmic reticulum, golgi	29.9	34.27
AT5G64600.1	Thale cress	mitochondrion	30.94	33.91
AT1G22460.1	Thale cress	golgi	32.69	33.1
AT3G54100.1	Thale cress	cytosol	31.82	28.53
AT2G37980.1	Thale cress	plastid	30.77	27.59
AT5G35570.1	Thale cress	cytosol, plastid	31.12	27.3
AT5G01100.1	Thale cress	plastid	30.07	27.26

Protein Annotations

MapMan:35.1	EntrezGene:843960	ProteinID:AAF16673.1	ProteinID:AAF17638.1	ProteinID:AEE35817.1	ArrayExpress:AT1G76270
EnsemblPlantsGene:AT1G76270	RefSeq:AT1G76270	TAIR:AT1G76270	RefSeq:AT1G76270-TAIR-G	EnsemblPlants:AT1G76270.1	TAIR:AT1G76270.1
EMBL:AY050886	Unigene:At.48378	EMBL:BT000994	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0006004	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	RefSeq:NP_565129.1	PFAM:PF10250	PIRSF:PIRSF009360
PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR31818
PANTHER:PTHR31818:SF1	UniProt:Q949U4	TMHMM:TMhelix	UniParc:UPI00000AC1E5	SEG:seg	:

Description

OFUT16O-fucosyltransferase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q949U4]

Coordinates

chr1:-:28613207..28616785

Molecular Weight (calculated)

65585.0 Da

IEP (calculated)

9.556

GRAVY (calculated)

-0.609

Length

572 amino acids

Sequence
(BLAST)

001: MNFHRRRYPY YNRLRRLLPL VIAVSLSLLI LFAFLSFLAP PPGDSDRLPP RVRYSSNDAI KATGFHIPRA GGRSDRDIWR SRNAEFFFGC SNASSKFANS
101: KAVTRNDRYL VIATSGGLNQ QRTGIVDAVV AARILNATLV VPKLDQKSYW KDASDFSHIF DVDWFISFLS GDVRIIKQLP LKGGRTWSTS RMRVPRKCNE
201: RCYINRVLPV LLKRHAVQLN KFDYRLSNKL SDDLQKLRCR VNYHALKFTD PILTMGNELV RRMRLRSKHF IALHLRYEPD MLAFSGCYYG GGDKERRELA
301: AIRRRWKTLH INNPEKQRRQ GRCPLTPEEV GLMLRALGYG SDVHIYVASG EVYGGEESLA PLKALFPHFY SKDTIATKEE LEPFSSYSSR MAALDFLVCD
401: ESDVFVTNNN GNMAKILAGR RRYLGHKPTV RPNAKKLYRL FMNKENTTWE EFSSKVRSFQ RGFMGEPKEV RAGRGEFHEN PSTCICEDTE AKAKAQLESR
501: KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS DLQDRGLYNG TSLDYDDPST SDEPELEAML SD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.