Factsheet for AT1G20550.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29524	Canola	extracellular, golgi, plasma membrane	89.89	89.89
Bra025826.1-P	Field mustard	extracellular, golgi, plasma membrane	89.72	89.56
CDY31477	Canola	extracellular, golgi, plasma membrane	89.01	89.01
AT1G76270.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	81.91	80.77
VIT_18s0001g00100.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion	69.68	68.59
KRH60950	Soybean	endoplasmic reticulum	69.5	68.41
KRH51625	Soybean	golgi, mitochondrion, vacuole	68.09	66.78
GSMUA_Achr3P14740_001	Banana	mitochondrion	59.4	64.18
PGSC0003DMT400075381	Potato	golgi	67.38	64.08
Solyc12g094590.1.1	Tomato	unclear	67.02	63.74
GSMUA_Achr8P13270_001	Banana	endoplasmic reticulum, golgi, plasma membrane	49.29	62.75
Solyc12g098400.1.1	Tomato	unclear	57.27	60.49
PGSC0003DMT400011606	Potato	golgi	56.56	59.85
Os04t0563000-01	Rice	endoplasmic reticulum, golgi	58.16	59.42
KXG26900	Sorghum	golgi	59.57	58.03
TraesCS2D01G401900.1	Wheat	golgi	58.87	57.94
GSMUA_Achr5P19070_001	Banana	endoplasmic reticulum, golgi, plasma membrane	62.41	57.89
TraesCS2B01G423100.1	Wheat	golgi	58.69	57.87
EES15207	Sorghum	golgi	59.4	57.86
Zm00001d002668_P004	Maize	golgi	59.57	57.73
AT4G38390.1	Thale cress	endoplasmic reticulum, nucleus, plasma membrane	56.03	57.35
Os08t0554050-01	Rice	golgi	60.64	57.29
TraesCS7D01G276100.1	Wheat	golgi	60.28	56.67
Zm00001d050483_P002	Maize	golgi	58.16	56.65
TraesCS5B01G348700.1	Wheat	golgi	57.98	56.38
TraesCS7A01G276200.2	Wheat	golgi	60.11	56.31
HORVU5Hr1G086560.1	Barley	golgi	57.62	56.13
TraesCS5D01G353700.1	Wheat	golgi	57.62	56.03
HORVU2Hr1G096100.42	Barley	mitochondrion, plastid	57.45	55.86
TraesCS7B01G174000.1	Wheat	golgi	59.75	55.79
TraesCS5A01G347600.2	Wheat	golgi	57.8	55.63
Zm00001d021448_P002	Maize	mitochondrion	58.16	55.22
OQU89872	Sorghum	endoplasmic reticulum, golgi, plasma membrane	57.8	54.79
TraesCS2A01G405000.3	Wheat	golgi	58.87	53.04
HORVU7Hr1G058080.1	Barley	plastid	60.64	52.7
AT4G16650.2	Thale cress	mitochondrion, plastid	47.52	48.82
AT5G15740.1	Thale cress	golgi	31.21	34.65
AT5G64600.1	Thale cress	mitochondrion	31.74	34.29
AT1G14020.1	Thale cress	cytosol, endoplasmic reticulum, golgi	29.79	33.67
AT2G03280.2	Thale cress	cytosol, endoplasmic reticulum, golgi	30.32	33.66
AT3G02250.1	Thale cress	golgi	30.5	33.59
AT1G22460.1	Thale cress	golgi	32.62	32.57
AT3G54100.1	Thale cress	cytosol	31.38	27.74
AT5G35570.1	Thale cress	cytosol, plastid	31.74	27.45
AT2G37980.1	Thale cress	plastid	30.5	26.96
AT5G01100.1	Thale cress	plastid	29.43	26.31

Protein Annotations

MapMan:35.1	EntrezGene:838643	ProteinID:AAF79608.1	ProteinID:AAF80643.1	ProteinID:AEE29985.1	ArrayExpress:AT1G20550
EnsemblPlantsGene:AT1G20550	RefSeq:AT1G20550	TAIR:AT1G20550	RefSeq:AT1G20550-TAIR-G	EnsemblPlants:AT1G20550.1	TAIR:AT1G20550.1
Unigene:At.70424	UniProt:F4HSU3	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005975	GO:GO:0006004	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	GO:GO:0019538	EMBL:KY906042	RefSeq:NP_173479.3	PFAM:PF10250	PIRSF:PIRSF009360
PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001017
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007098
PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020137	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR31818	PANTHER:PTHR31818:SF1	TMHMM:TMhelix	UniParc:UPI0001E92AB9
SEG:seg	:	:	:	:	:

Description

OFUT6O-fucosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HSU3]

Coordinates

chr1:-:7115241..7118331

Molecular Weight (calculated)

64908.6 Da

IEP (calculated)

9.766

GRAVY (calculated)

-0.649

Length

564 amino acids

Sequence
(BLAST)

001: MAFQRRRNNY YNRLRRLLPF ICAVSGALLI LFALLSILSP PPDDSDRRIS KHINYGANDE KKNTPVVFTV PRGGGRSDRD IWRSWNAEFF YGCCNASSKF
101: PNAKAITRND RYLAIATSGG LNQQRTGIVD AVVAARILNA TLVIPKLDQK SYWKDASDFS NIFDVDWFMS FLSKDVKIIE KLPQKGGQTW SPRRMRVPRK
201: CNEKCYINRV LPVLQKRHAV QLNKFDYRLS NKLRDDLQKL RCRVNYHALK FTDPILEMGN ELVRRMRKRS KHFIALHLRF EPDMLAFSGC YYGGGEKEKK
301: ELGTIRRRWK TLHVNNPEKQ RRQGRCPLTP EEVGLMLRAL GYGSDVHIYV ASGEVYGGEK SLAPLKALFP HFYSKDTIAT KMELKPFSSY SSRMAALDFL
401: VCDESDVFVT NNNGNMARIL AGRRRYFGHK PTIRPNAKKL YKLFMSKENT TWEEFASRVR TFQKGFMGEP KEVRAGKGEF HENPAACICE DTDAKVKAGK
501: MDSRKFGKKE QKEDEDAELS SSETDYEEDQ TDLQDRGLYN GTRLDYDDAL SVSEEPELEE MLSD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.