Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 5
- cytosol 2
- vacuole 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028889.1-P | Field mustard | plastid | 85.74 | 85.74 |
| CDY55908 | Canola | plastid | 85.74 | 84.8 |
| CDY48112 | Canola | cytosol, mitochondrion, peroxisome, plasma membrane, plastid | 75.75 | 81.85 |
| CDY10480 | Canola | plastid | 83.84 | 80.76 |
| CDY40321 | Canola | plastid | 82.41 | 79.75 |
| Bra009626.1-P | Field mustard | plastid | 81.78 | 79.63 |
| KRH65987 | Soybean | cytosol | 47.86 | 61.63 |
| Os05t0451900-01 | Rice | cytosol | 40.1 | 60.24 |
| OQU87869 | Sorghum | mitochondrion | 42.16 | 56.72 |
| VIT_08s0007g01650.t01 | Wine grape | plastid | 54.68 | 55.83 |
| AT2G37980.1 | Thale cress | plastid | 54.83 | 54.23 |
| AT3G54100.1 | Thale cress | cytosol | 54.52 | 53.92 |
| KRH75793 | Soybean | plastid | 53.41 | 52.74 |
| TraesCS3B01G397600.1 | Wheat | plastid | 45.01 | 51.64 |
| TraesCS3D01G358900.2 | Wheat | plastid | 44.85 | 51.27 |
| Solyc09g011860.2.1 | Tomato | plastid | 52.3 | 51.24 |
| PGSC0003DMT400028801 | Potato | plastid | 51.98 | 51.17 |
| PGSC0003DMT400052382 | Potato | plastid | 51.98 | 51.09 |
| TraesCS3A01G365800.1 | Wheat | plastid | 45.01 | 51.08 |
| Solyc10g085050.1.1 | Tomato | cytosol | 47.54 | 49.75 |
| HORVU1Hr1G073150.1 | Barley | plastid | 46.43 | 48.91 |
| TraesCS1B01G288800.1 | Wheat | plastid | 45.96 | 48.01 |
| Zm00001d038263_P001 | Maize | plastid | 43.58 | 47.99 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, plasma membrane, plastid | 44.06 | 47.85 |
| Zm00001d012362_P001 | Maize | plastid | 41.2 | 47.71 |
| GSMUA_Achr5P28820_001 | Banana | plastid | 39.78 | 47.54 |
| TraesCS1A01G279800.1 | Wheat | plastid | 45.8 | 47.53 |
| KXG22127 | Sorghum | plastid | 45.8 | 47.3 |
| TraesCS1D01G279000.1 | Wheat | plastid | 42.16 | 46.67 |
| Os01t0851100-02 | Rice | plastid | 31.38 | 46.26 |
| Zm00001d010112_P001 | Maize | cytosol, plastid | 42.16 | 46.02 |
| AT5G35570.1 | Thale cress | cytosol, plastid | 43.9 | 42.48 |
| AT5G15740.1 | Thale cress | golgi | 33.6 | 41.73 |
| AT3G02250.1 | Thale cress | golgi | 33.44 | 41.21 |
| AT5G64600.1 | Thale cress | mitochondrion | 33.28 | 40.23 |
| AT1G14020.1 | Thale cress | cytosol, endoplasmic reticulum, golgi | 30.74 | 38.88 |
| AT2G03280.2 | Thale cress | cytosol, endoplasmic reticulum, golgi | 30.11 | 37.4 |
| AT1G22460.1 | Thale cress | golgi | 32.96 | 36.81 |
| AT4G16650.2 | Thale cress | mitochondrion, plastid | 26.62 | 30.6 |
| AT1G76270.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 27.26 | 30.07 |
| AT4G38390.1 | Thale cress | endoplasmic reticulum, nucleus, plasma membrane | 26.15 | 29.95 |
| AT1G20550.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 26.31 | 29.43 |
Protein Annotations
| MapMan:35.1 | EntrezGene:831831 | UniProt:A0A178U817 | ProteinID:AED90299.1 | EMBL:AK228227 | ArrayExpress:AT5G01100 |
| EnsemblPlantsGene:AT5G01100 | RefSeq:AT5G01100 | TAIR:AT5G01100 | RefSeq:AT5G01100-TAIR-G | EnsemblPlants:AT5G01100.1 | TAIR:AT5G01100.1 |
| Unigene:At.33964 | EMBL:BT046173 | ProteinID:CAB69838.1 | InterPro:FucosylTrfase_pln | InterPro:GDP-Fuc_O-FucTrfase | GO:GO:0000139 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005975 | GO:GO:0006004 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0007155 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 | GO:GO:0071555 | GO:GO:0080157 |
| EMBL:KY906082 | RefSeq:NP_195730.1 | ProteinID:OAO90088.1 | PFAM:PF10250 | PIRSF:PIRSF009360 | PO:PO:0000293 |
| PANTHER:PTHR31741 | PANTHER:PTHR31741:SF4 | UniProt:Q9LFC6 | TMHMM:TMhelix | UniParc:UPI000009F878 | SEG:seg |
Description
FRB1FRB1 [Source:UniProtKB/TrEMBL;Acc:A0A178U817]
Coordinates
chr5:-:34538..37999
Molecular Weight (calculated)
71311.3 Da
IEP (calculated)
9.300
GRAVY (calculated)
-0.407
Length
631 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVGVPVNPS SSSQLPAAPT TTTRRRVADS QEDHSHVNTV GGGNAVVYVP DEEETATSCC GGGGGGGSLS CCPSGSHHNY LVGFLSLRKF RLVWMLMVEN
101: KSKWTAGIAR NMRSTTNLGR FILTLLSILV VTFFLIVALS GGVGRRRKHV EKHEFVVSIH PRPTIEKIIR EDESSNSFQV LVPKTTSIPE IWNQPEVGNY
201: QKCVARPKNQ RPIKQTNGYL LVHANGGLNQ MRTGICDMVA IAKIMNATLV LPFLDHSSFW SDPSSFKDIF DWKHFIKVLA EDVNIVEYLP QEFASIKPLE
301: KNPVSWSKSS YYRNSISKLL KKHKVIVFNH TDSRLANNSP PPSIQRLRCR ANYEALRYSE DIENLSNVLS SRLRENNEPY LALHLRYEKD MLAFTGCNHS
401: LSNEESIDLE KMRFSIPHWK EKVINGTERR LEGNCPMTPR EAAVFLKAMG FPSTTNIYIV AGKIYGQNSM TAFHEEFPNV FFHNTLATEE ELSTIKPYQN
501: RLAALDYNLA LESDIFAYTY DGNMAKAVQG HRRFEGFRKT INPDRQRFVR LIDRLDAGLI SWEDFSSKVK KMHQHRIGAP YLRQPGKAGM SPKLEENFYA
601: NPLPGCVCDT SEEQTGLNRF ERPSLRAQSL R
101: KSKWTAGIAR NMRSTTNLGR FILTLLSILV VTFFLIVALS GGVGRRRKHV EKHEFVVSIH PRPTIEKIIR EDESSNSFQV LVPKTTSIPE IWNQPEVGNY
201: QKCVARPKNQ RPIKQTNGYL LVHANGGLNQ MRTGICDMVA IAKIMNATLV LPFLDHSSFW SDPSSFKDIF DWKHFIKVLA EDVNIVEYLP QEFASIKPLE
301: KNPVSWSKSS YYRNSISKLL KKHKVIVFNH TDSRLANNSP PPSIQRLRCR ANYEALRYSE DIENLSNVLS SRLRENNEPY LALHLRYEKD MLAFTGCNHS
401: LSNEESIDLE KMRFSIPHWK EKVINGTERR LEGNCPMTPR EAAVFLKAMG FPSTTNIYIV AGKIYGQNSM TAFHEEFPNV FFHNTLATEE ELSTIKPYQN
501: RLAALDYNLA LESDIFAYTY DGNMAKAVQG HRRFEGFRKT INPDRQRFVR LIDRLDAGLI SWEDFSSKVK KMHQHRIGAP YLRQPGKAGM SPKLEENFYA
601: NPLPGCVCDT SEEQTGLNRF ERPSLRAQSL R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.