Factsheet for Solyc08g078540.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

nucleus 1
plastid 2
golgi 2
mitochondrion 3
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012157	Potato	golgi, plastid, vacuole	95.95	96.43
Solyc06g060750.2.1	Tomato	mitochondrion	71.79	78.7
VIT_00s0229g00100.t01	Wine grape	cytosol, golgi, plastid	70.78	73.25
Bra012697.1-P	Field mustard	endoplasmic reticulum	62.67	73.18
KRH04145	Soybean	golgi, mitochondrion, plastid	65.54	70.8
CDY32271	Canola	plastid	65.37	70.36
Bra038495.1-P	Field mustard	plastid	65.37	70.36
CDY40517	Canola	mitochondrion	65.37	70.24
CDY53645	Canola	mitochondrion	62.84	70.19
KRH28091	Soybean	plastid	65.54	70.16
AT4G16650.2	Thale cress	mitochondrion, plastid	65.03	70.13
KRH77356	Soybean	plastid	64.86	69.95
Bra040745.1-P	Field mustard	mitochondrion	62.5	69.94
CDY50845	Canola	cytosol, endoplasmic reticulum, golgi, plastid	62.84	69.92
GSMUA_Achr7P07030_001	Banana	golgi	60.47	69.38
CDX90501	Canola	mitochondrion	64.36	68.9
CDY60713	Canola	mitochondrion	64.19	68.72
EES12618	Sorghum	plastid	57.77	68.4
Zm00001d002742_P002	Maize	endoplasmic reticulum, peroxisome, plasma membrane, plastid	57.09	67.47
TraesCS2D01G410600.1	Wheat	plastid	57.26	67.0
TraesCS2B01G432900.2	Wheat	plastid	57.26	67.0
HORVU2Hr1G097570.8	Barley	plastid	56.76	66.93
Os04t0551300-01	Rice	cytosol, golgi, mitochondrion, plastid	35.14	66.88
GSMUA_Achr1P04270_001	Banana	plastid	60.98	66.61
TraesCS2A01G414000.1	Wheat	plastid	56.76	66.4
KRH57421	Soybean	mitochondrion, plasma membrane, plastid, vacuole	65.2	63.07
Solyc12g098400.1.1	Tomato	unclear	44.43	49.25
Solyc01g112070.2.1	Tomato	nucleus	44.09	48.16
Solyc12g094590.1.1	Tomato	unclear	47.47	47.39
Solyc01g010930.2.1	Tomato	cytosol, extracellular	21.11	46.82
Solyc10g074490.1.1	Tomato	golgi	47.3	43.41
Solyc06g069380.2.1	Tomato	mitochondrion	30.07	36.03
Solyc05g013140.2.1	Tomato	cytosol, endoplasmic reticulum, golgi	30.57	35.98
Solyc03g114730.2.1	Tomato	cytosol	29.22	34.67
Solyc11g005870.1.1	Tomato	mitochondrion	28.55	34.28
Solyc12g038670.1.1	Tomato	cytosol	29.22	33.92
Solyc04g074670.2.1	Tomato	mitochondrion	30.57	33.83
Solyc03g096370.2.1	Tomato	golgi, mitochondrion, nucleus	26.86	30.17
Solyc10g085050.1.1	Tomato	cytosol	28.21	27.69
Solyc09g011860.2.1	Tomato	plastid	29.9	27.48
Solyc07g041750.2.1	Tomato	plastid	29.56	27.09
Solyc11g010230.1.1	Tomato	nucleus	4.39	19.12
Solyc05g051500.2.1	Tomato	nucleus, plastid	4.39	19.12
Solyc04g081150.2.1	Tomato	nucleus, plastid	4.39	19.12
Solyc04g074580.1.1	Tomato	nucleus, plastid	4.39	19.12

Protein Annotations

MapMan:35.1	InterPro:FucosylTrfase_pln	InterPro:GDP-Fuc_O-FucTrfase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975
GO:GO:0006004	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	UniProt:K4CNL3
PFAM:PF10250	PIRSF:PIRSF009360	PANTHER:PTHR31818	PANTHER:PTHR31818:SF3	EnsemblPlantsGene:Solyc08g078540.2	EnsemblPlants:Solyc08g078540.2.1
UniParc:UPI000276ACD5	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr8:-:62324820..62333346

Molecular Weight (calculated)

68518.0 Da

IEP (calculated)

9.502

GRAVY (calculated)

-0.517

Length

592 amino acids

Sequence
(BLAST)

001: MGLAKLWKYS GGLFSNLAAA VHHQHKQHFV FSCFQSPSYG ASPPPPQSRR PISWTCICGF MLFALGLISL FTGHVASDVE WYSQRIVKRN WFYKLDGSHR
101: LSIDIWKSRY SSFYYGCSER GPHFTERGPH FSSAVRERFS NGYLLIATSG GLNQQRTGIT DAVVVARILN ATLVVPELDH HSFWKDESDF SNIFDVGWFI
201: SYLAKDVTIV KRVPEKVMMS MEKPPYTMRV PRKSEPEYYL EQVLPILLRR KVLQLTKFDY RLASDLDEEL QKLRCRVNYH ALRFTKPIRN LGQKLVFRMR
301: RMEERFIAVH LRFEPDMLAF SGCYYGGGDK ERYELGEIRK RWATLPELSP DEERARGKCP LTPHEVGLML RALGFNNDTY LYVASGEIYG GEKTLQPLRE
401: LFPNFYTKEM LAGEELQPFL PYSSRLAAID YIVCDESDVF ATNNNGNMAK ILAGRRRYMG HKRTIRPNAK RLSALFMARD KMDWATFSRK VKSCQRGFLG
501: EPEENKPGRG DFHEFPSTCI CKRPFNLSNF TSKENKYQIS RRNPTVSESR YTYLSNSSNL EQKSSQKFNE ESLRDRHGSL IDEIDPDNPL SD

Best Arabidopsis Sequence Match ( AT4G16650.1 )
(BLAST)

001: MGVVAEVWRS SVRLLTNSPQ LNGGSHKSAL WKWRFFSAQP KRTVMWTWVC GFMLFSLGVI SLFTGHVVSH LEWYSQQLSK RSLLDMSRRE PIDVWKSKYS
101: KFFYGCSERG RNFLPAVQEQ SSNGYLLIAA SGGLNQQRTG ITDAVVVARI LNATLVVPEL DHHSYWKDDS DFSDIFDVNW FISSLAKDVT IVKRVPDRVM
201: RAMEKPPYTT RVPRKSTLEY YLDQVLPILT RRHVLQLTKF DYRLANDLDE DMQKLRCRVN YHALRFTKRI QSVGMKVVKR MRKMAKRFIA VHLRFEPDML
301: AFSGCDFGGG EKERAELAEI RKRWDTLPDL DPLEERKRGK CPLTPHEVGL MLRALGFTND TYIYVASGEI YGGEKTLKPL RELFPNFYTK EMLANDELKP
401: LLPYSSRLAA IDYIVSDESD VFITNNNGNM AKILAGRRRY MGHKRTIRPN AKKLSALFMD REKMEWQTFA KKVKSCQRGF MGDPDEFKPG RGEFHEYPQS
501: CICQRPFSYD KTSTDDEEED MSEENHNSTS PGHVHLSSAD NERDEVFPD

Arabidopsis Description

OFUT29O-fucosyltransferase 29 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPF8]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.